RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 GJB2P29033 226 aa12.73□□□□□ -0.37
SMC3-201ENST00000361804 POLA2Q14181 598 aa12.73□□□□□ -0.37
SMC3-201ENST00000361804 AIMP1Q12904 312 aaKnown RBP12.73□□□□□ -0.37
SMC3-201ENST00000361804 SPC24Q8NBT2 197 aa12.73□□□□□ -0.37
SMC3-201ENST00000361804 TLR7Q9NYK1 1049 aaKnown RBP12.73□□□□□ -0.37
SMC3-201ENST00000361804 SMC3Q9UQE7 1217 aa12.73□□□□□ -0.37
SMC3-201ENST00000361804 EDC3Q96F86 508 aaKnown RBP12.72□□□□□ -0.37
SMC3-201ENST00000361804 BCL11BQ9C0K0 894 aaPredicted RBP12.72□□□□□ -0.37
SMC3-201ENST00000361804 CCDC8Q9H0W5 538 aaPredicted RBP12.72□□□□□ -0.37
SMC3-201ENST00000361804 CAMK4Q16566 473 aa12.72□□□□□ -0.37
SMC3-201ENST00000361804 HS1BP3Q53T59 392 aa12.72□□□□□ -0.37
SMC3-201ENST00000361804 DNAAF4Q8WXU2 420 aa12.72□□□□□ -0.37
SMC3-201ENST00000361804 DDX60Q8IY21 1712 aaKnown RBP12.72□□□□□ -0.37
SMC3-201ENST00000361804 PIP4K2AP48426 406 aaPredicted RBP12.71□□□□□ -0.37
SMC3-201ENST00000361804 CNTROBQ8N137 903 aa12.71□□□□□ -0.37
SMC3-201ENST00000361804 KIF1BPQ96EK5 621 aa12.71□□□□□ -0.37
SMC3-201ENST00000361804 PDCL3Q9H2J4 239 aa12.71□□□□□ -0.37
SMC3-201ENST00000361804 DIAPH3Q9NSV4 1193 aa12.71□□□□□ -0.37
SMC3-201ENST00000361804 PPFIA3O75145 1194 aa12.71□□□□□ -0.37
SMC3-201ENST00000361804 F13A1P00488 732 aa12.71□□□□□ -0.37
SMC3-201ENST00000361804 HYPKQ9NX55 129 aa12.71□□□□□ -0.37
SMC3-201ENST00000361804 LIMCH1Q9UPQ0 1083 aa12.71□□□□□ -0.37
SMC3-201ENST00000361804 CCDC9Q9Y3X0 531 aaKnown RBP12.71□□□□□ -0.37
SMC3-201ENST00000361804 LAMA4Q16363 1823 aa12.71□□□□□ -0.38
SMC3-201ENST00000361804 STK3Q13188 491 aa12.71□□□□□ -0.38
SMC3-201ENST00000361804 ME3Q16798 604 aa12.71□□□□□ -0.38
SMC3-201ENST00000361804 PKNOX2Q96KN3 472 aa12.71□□□□□ -0.38
SMC3-201ENST00000361804 PRDM10Q9NQV6 1147 aa12.71□□□□□ -0.38
SMC3-201ENST00000361804 BABAM1Q9NWV8 329 aa12.71□□□□□ -0.38
SMC3-201ENST00000361804 RNMTO43148 476 aaKnown RBP12.7□□□□□ -0.38
SMC3-201ENST00000361804 UTRNP46939 3433 aa12.7□□□□□ -0.38
SMC3-201ENST00000361804 CABLES1Q8TDN4 633 aa12.7□□□□□ -0.38
SMC3-201ENST00000361804 ANKRD24Q8TF21 1146 aa12.7□□□□□ -0.38
SMC3-201ENST00000361804 MAP3K2Q9Y2U5 619 aa12.7□□□□□ -0.38
SMC3-201ENST00000361804 GIGYF1O75420 1035 aaPredicted RBP12.7□□□□□ -0.38
SMC3-201ENST00000361804 SYAP1Q96A49 352 aaPredicted RBP12.7□□□□□ -0.38
SMC3-201ENST00000361804 IL17RAQ96F46 866 aa12.7□□□□□ -0.38
SMC3-201ENST00000361804 AACSQ86V21 672 aa12.69□□□□□ -0.38
SMC3-201ENST00000361804 TNS3Q68CZ2 1445 aa12.69□□□□□ -0.38
SMC3-201ENST00000361804 CCDC183Q5T5S1 534 aa12.69□□□□□ -0.38
SMC3-201ENST00000361804 LMOD2Q6P5Q4 547 aa12.69□□□□□ -0.38
SMC3-201ENST00000361804 DNAJC5Q9H3Z4 198 aa12.69□□□□□ -0.38
SMC3-201ENST00000361804 PDRG1Q9NUG6 133 aa12.69□□□□□ -0.38
SMC3-201ENST00000361804 C9orf78Q9NZ63 289 aaPredicted RBP12.69□□□□□ -0.38
SMC3-201ENST00000361804 MTMR6Q9Y217 621 aa12.69□□□□□ -0.38
SMC3-201ENST00000361804 SLIT2O94813 1529 aa12.69□□□□□ -0.38
SMC3-201ENST00000361804 KDM4FA0A1W2PPD8 638 aa12.69□□□□□ -0.38
SMC3-201ENST00000361804 BTBD11A6QL63 1104 aa12.69□□□□□ -0.38
SMC3-201ENST00000361804 KIAA2012Q0VF49 1180 aa12.69□□□□□ -0.38
SMC3-201ENST00000361804 TPCN1Q9ULQ1 816 aa12.69□□□□□ -0.38
SMC3-201ENST00000361804 KCNJ4P48050 445 aa12.69□□□□□ -0.38
SMC3-201ENST00000361804 AKAP4Q5JQC9 854 aa12.69□□□□□ -0.38
SMC3-201ENST00000361804 TFIP11Q9UBB9 837 aaKnown RBP12.69□□□□□ -0.38
SMC3-201ENST00000361804 FOSBP53539 338 aa12.68□□□□□ -0.38
SMC3-201ENST00000361804 CDC37L1Q7L3B6 337 aa12.68□□□□□ -0.38
SMC3-201ENST00000361804 KRT28Q7Z3Y7 464 aa12.68□□□□□ -0.38
SMC3-201ENST00000361804 BOLA2Q9H3K6 86 aa12.68□□□□□ -0.38
SMC3-201ENST00000361804 CYP27B1O15528 508 aa12.68□□□□□ -0.38
SMC3-201ENST00000361804 PSME1Q06323 249 aa12.68□□□□□ -0.38
SMC3-201ENST00000361804 ZNF530Q6P9A1 599 aaPredicted RBP12.68□□□□□ -0.38
SMC3-201ENST00000361804 CKAP2LQ8IYA6 745 aa12.68□□□□□ -0.38
SMC3-201ENST00000361804 RAB11FIP3O75154 756 aa12.67□□□□□ -0.38
SMC3-201ENST00000361804 TEFQ10587 303 aa12.67□□□□□ -0.38
SMC3-201ENST00000361804 PLCH1Q4KWH8 1693 aa12.67□□□□□ -0.38
SMC3-201ENST00000361804 COL5A2P05997 1499 aaPredicted RBP12.67□□□□□ -0.38
SMC3-201ENST00000361804 A0A0D9SFI3 127 aa12.67□□□□□ -0.38
SMC3-201ENST00000361804 LIG1P18858 919 aa12.67□□□□□ -0.38
SMC3-201ENST00000361804 NMIQ13287 307 aaPredicted RBP12.67□□□□□ -0.38
SMC3-201ENST00000361804 PYCARDQ9ULZ3 195 aa12.67□□□□□ -0.38
SMC3-201ENST00000361804 RBM8AQ9Y5S9 174 aaKnown RBP12.67□□□□□ -0.38
SMC3-201ENST00000361804 COL4A1P02462 1669 aa12.67□□□□□ -0.38
SMC3-201ENST00000361804 IFIT2P09913 472 aaKnown RBP12.67□□□□□ -0.38
SMC3-201ENST00000361804 HSPA2P54652 639 aa12.67□□□□□ -0.38
SMC3-201ENST00000361804 UBE2HP62256 183 aa12.67□□□□□ -0.38
SMC3-201ENST00000361804 EAF2Q96CJ1 260 aaPredicted RBP12.67□□□□□ -0.38
SMC3-201ENST00000361804 C19orf44Q9H6X5 657 aa12.67□□□□□ -0.38
SMC3-201ENST00000361804 SASS6Q6UVJ0 657 aa12.66□□□□□ -0.38
SMC3-201ENST00000361804 CLASRPQ8N2M8 674 aaKnown RBP12.66□□□□□ -0.38
SMC3-201ENST00000361804 SUCLG2Q96I99 432 aa12.66□□□□□ -0.38
SMC3-201ENST00000361804 MYO5AQ9Y4I1 1855 aaKnown RBP12.66□□□□□ -0.38
SMC3-201ENST00000361804 IGKV5-2P06315 115 aa12.66□□□□□ -0.38
SMC3-201ENST00000361804 NOLC1Q14978 699 aaKnown RBP eCLIP12.66□□□□□ -0.38
SMC3-201ENST00000361804 SLFNL1Q499Z3 407 aa12.66□□□□□ -0.38
SMC3-201ENST00000361804 TTC6Q86TZ1 520 aa12.66□□□□□ -0.38
SMC3-201ENST00000361804 DDX11Q96FC9 970 aa12.66□□□□□ -0.38
SMC3-201ENST00000361804 CPDO75976 1380 aa12.66□□□□□ -0.38
SMC3-201ENST00000361804 UTYO14607 1347 aa12.66□□□□□ -0.38
SMC3-201ENST00000361804 SASH1O94885 1247 aa12.66□□□□□ -0.38
SMC3-201ENST00000361804 SLC39A6Q13433 755 aa12.66□□□□□ -0.38
SMC3-201ENST00000361804 KCNF1Q9H3M0 494 aa12.66□□□□□ -0.38
SMC3-201ENST00000361804 NWD2Q9ULI1 1742 aa12.65□□□□□ -0.38
SMC3-201ENST00000361804 A0A087WWV3 80 aa12.65□□□□□ -0.38
SMC3-201ENST00000361804 ZNF589Q86UQ0 364 aaPredicted RBP12.65□□□□□ -0.38
SMC3-201ENST00000361804 BICC1Q9H694 974 aaKnown RBP12.65□□□□□ -0.38
SMC3-201ENST00000361804 GLRX3O76003 335 aaKnown RBP12.65□□□□□ -0.38
SMC3-201ENST00000361804 PHF14O94880 888 aa12.65□□□□□ -0.38
SMC3-201ENST00000361804 KCNH5Q8NCM2 988 aa12.65□□□□□ -0.38
SMC3-201ENST00000361804 ECHDC1Q9NTX5 307 aa12.65□□□□□ -0.38
SMC3-201ENST00000361804 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.65□□□□□ -0.38
SMC3-201ENST00000361804 AOX1Q06278 1338 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms