RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 PCK1P35558 622 aa15.07■□□□□ 0
SRGAP3-201ENST00000360413 USP5P45974 858 aa15.07■□□□□ 0
SRGAP3-201ENST00000360413 DNAJC21Q5F1R6 531 aaKnown RBP15.07■□□□□ 0
SRGAP3-201ENST00000360413 GABPB2Q8TAK5 448 aaPredicted RBP15.07■□□□□ 0
SRGAP3-201ENST00000360413 MKNK2Q9HBH9 465 aa15.07■□□□□ 0
SRGAP3-201ENST00000360413 C8orf76Q96K31 380 aa15.07■□□□□ 0
SRGAP3-201ENST00000360413 PANK2Q9BZ23 570 aa15.07■□□□□ 0
SRGAP3-201ENST00000360413 LUC7L2Q9Y383 392 aaKnown RBP15.07■□□□□ 0
SRGAP3-201ENST00000360413 HMGB3O15347 200 aaKnown RBP15.07■□□□□ 0
SRGAP3-201ENST00000360413 NCBP1Q09161 790 aaKnown RBP15.07■□□□□ 0
SRGAP3-201ENST00000360413 ZPR1O75312 459 aa15.06■□□□□ 0
SRGAP3-201ENST00000360413 MTIF2P46199 727 aaKnown RBP15.06■□□□□ 0
SRGAP3-201ENST00000360413 RPUSD2Q8IZ73 545 aaKnown RBP15.06■□□□□ 0
SRGAP3-201ENST00000360413 SELENOSQ9BQE4 189 aa15.06■□□□□ 0
SRGAP3-201ENST00000360413 LMNTD2Q8IXW0 634 aa15.06■□□□□ 0
SRGAP3-201ENST00000360413 TCP11L1Q9NUJ3 509 aa15.06■□□□□ 0
SRGAP3-201ENST00000360413 B4GALNT4Q76KP1 1039 aa15.06■□□□□ 0
SRGAP3-201ENST00000360413 MSANTD4Q8NCY6 345 aa15.06■□□□□ 0
SRGAP3-201ENST00000360413 FAM76AQ8TAV0 307 aa15.06■□□□□ 0
SRGAP3-201ENST00000360413 PHACTR2O75167 634 aa15.06■□□□□ 0
SRGAP3-201ENST00000360413 ZBTB9Q96C00 473 aa15.06■□□□□ 0
SRGAP3-201ENST00000360413 USH1CQ9Y6N9 552 aa15.06■□□□□ 0
SRGAP3-201ENST00000360413 GAS8O95995 478 aa15.06■□□□□ 0
SRGAP3-201ENST00000360413 WDR63Q8IWG1 891 aa15.05■□□□□ 0
SRGAP3-201ENST00000360413 TCHPQ9BT92 498 aa15.05■□□□□ 0
SRGAP3-201ENST00000360413 PPP2R1AP30153 589 aa15.05■□□□□ -0
SRGAP3-201ENST00000360413 STMN2Q93045 179 aa15.05■□□□□ -0
SRGAP3-201ENST00000360413 SAMD15Q9P1V8 674 aa15.05■□□□□ -0
SRGAP3-201ENST00000360413 PSMC4P43686 418 aa15.05■□□□□ -0
SRGAP3-201ENST00000360413 GBP7Q8N8V2 638 aaPredicted RBP15.05■□□□□ -0
SRGAP3-201ENST00000360413 TACC1O75410 805 aa15.05■□□□□ -0
SRGAP3-201ENST00000360413 NBPF8Q3BBV2 869 aa15.05■□□□□ -0
SRGAP3-201ENST00000360413 FHOD3Q2V2M9 1422 aa15.05■□□□□ -0
SRGAP3-201ENST00000360413 MYO1BO43795 1136 aa15.05■□□□□ -0
SRGAP3-201ENST00000360413 RFC1P35251 1148 aaPredicted RBP15.05■□□□□ -0
SRGAP3-201ENST00000360413 UBASH3AP57075 661 aa15.05■□□□□ -0
SRGAP3-201ENST00000360413 KIF5AQ12840 1032 aa15.05■□□□□ -0
SRGAP3-201ENST00000360413 STRN4Q9NRL3 753 aa15.05■□□□□ -0
SRGAP3-201ENST00000360413 CCDC77Q9BR77 488 aa15.04■□□□□ -0
SRGAP3-201ENST00000360413 PPFIBP2Q8ND30 876 aa15.04■□□□□ -0
SRGAP3-201ENST00000360413 UBA5Q9GZZ9 404 aa15.04■□□□□ -0
SRGAP3-201ENST00000360413 TPD52P55327 224 aaPredicted RBP15.04■□□□□ -0
SRGAP3-201ENST00000360413 GUCY1B3Q02153 619 aa15.04■□□□□ -0
SRGAP3-201ENST00000360413 ISM2Q6H9L7 571 aa15.04■□□□□ -0
SRGAP3-201ENST00000360413 ERMNQ8TAM6 284 aa15.04■□□□□ -0
SRGAP3-201ENST00000360413 C11orf95C9JLR9 678 aaPredicted RBP15.04■□□□□ -0
SRGAP3-201ENST00000360413 HDXQ7Z353 690 aa15.04■□□□□ -0
SRGAP3-201ENST00000360413 SELENOOQ9BVL4 669 aa15.04■□□□□ -0
SRGAP3-201ENST00000360413 SYNCQ9H7C4 482 aa15.04■□□□□ -0
SRGAP3-201ENST00000360413 GIMAP6Q6P9H5 292 aa15.04■□□□□ -0
SRGAP3-201ENST00000360413 CATIPQ7Z7H3 387 aa15.04■□□□□ -0
SRGAP3-201ENST00000360413 THEMISQ8N1K5 641 aaPredicted RBP15.04■□□□□ -0
SRGAP3-201ENST00000360413 TOM1L2Q6ZVM7 507 aa15.04■□□□□ -0
SRGAP3-201ENST00000360413 CCDC50Q8IVM0 306 aa15.04■□□□□ -0
SRGAP3-201ENST00000360413 NDC80O14777 642 aa15.03■□□□□ -0
SRGAP3-201ENST00000360413 ALDH3A1P30838 453 aa15.03■□□□□ -0
SRGAP3-201ENST00000360413 MAP2K2P36507 400 aa15.03■□□□□ -0
SRGAP3-201ENST00000360413 MAP3K9P80192 1104 aa15.03■□□□□ -0
SRGAP3-201ENST00000360413 PDE1CQ14123 709 aaPredicted RBP15.03■□□□□ -0
SRGAP3-201ENST00000360413 PPP1R12CQ9BZL4 782 aa15.03■□□□□ -0
SRGAP3-201ENST00000360413 STX6O43752 255 aa15.03■□□□□ -0
SRGAP3-201ENST00000360413 ZNF853P0CG23 659 aa15.03■□□□□ -0
SRGAP3-201ENST00000360413 MAP3K12Q12852 859 aa15.03■□□□□ -0
SRGAP3-201ENST00000360413 GGNBP2Q9H3C7 697 aa15.03■□□□□ -0
SRGAP3-201ENST00000360413 POLR3DP05423 398 aaPredicted RBP15.03■□□□□ -0
SRGAP3-201ENST00000360413 ATP2A2P16615 1042 aaKnown RBP15.03■□□□□ -0
SRGAP3-201ENST00000360413 GBP1P32455 592 aa15.03■□□□□ -0
SRGAP3-201ENST00000360413 FAM160A1Q05DH4 1040 aa15.03■□□□□ -0
SRGAP3-201ENST00000360413 LRCH2Q5VUJ6 765 aa15.03■□□□□ -0
SRGAP3-201ENST00000360413 CACNA2D3Q8IZS8 1091 aa15.03■□□□□ -0
SRGAP3-201ENST00000360413 BANK1Q8NDB2 785 aa15.03■□□□□ -0
SRGAP3-201ENST00000360413 IFIT1P09914 478 aaKnown RBP15.03■□□□□ -0
SRGAP3-201ENST00000360413 CCDC117Q8IWD4 279 aaPredicted RBP15.03■□□□□ -0
SRGAP3-201ENST00000360413 SETDB1Q15047 1291 aa15.02■□□□□ -0
SRGAP3-201ENST00000360413 POTEDQ86YR6 584 aa15.02■□□□□ -0
SRGAP3-201ENST00000360413 WIZO95785 1651 aa15.02■□□□□ -0
SRGAP3-201ENST00000360413 ANO6Q4KMQ2 910 aa15.02■□□□□ -0
SRGAP3-201ENST00000360413 OSCARQ8IYS5 282 aa15.02■□□□□ -0
SRGAP3-201ENST00000360413 NAPBQ9H115 298 aa15.02■□□□□ -0
SRGAP3-201ENST00000360413 FAM177BA6PVY3 158 aa15.02■□□□□ -0
SRGAP3-201ENST00000360413 SRGAP3O43295 1099 aa15.02■□□□□ -0
SRGAP3-201ENST00000360413 LIMCH1Q9UPQ0 1083 aa15.02■□□□□ -0
SRGAP3-201ENST00000360413 BMP15O95972 392 aa15.02■□□□□ -0
SRGAP3-201ENST00000360413 PRPF40BQ6NWY9 871 aaKnown RBP15.02■□□□□ -0
SRGAP3-201ENST00000360413 SMC1BQ8NDV3 1235 aa15.02■□□□□ -0
SRGAP3-201ENST00000360413 TUBB4AP04350 444 aa15.02□□□□□ -0.01
SRGAP3-201ENST00000360413 PRKAR2BP31323 418 aa15.02□□□□□ -0.01
SRGAP3-201ENST00000360413 PPP1R9BQ96SB3 815 aa15.02□□□□□ -0.01
SRGAP3-201ENST00000360413 PSMD1Q99460 953 aa15.02□□□□□ -0.01
SRGAP3-201ENST00000360413 RMND1Q9NWS8 449 aa15.02□□□□□ -0.01
SRGAP3-201ENST00000360413 NOC2LQ9Y3T9 749 aaKnown RBP15.02□□□□□ -0.01
SRGAP3-201ENST00000360413 IFT74Q96LB3 600 aa15.02□□□□□ -0.01
SRGAP3-201ENST00000360413 CCDC194A0A1B0GVG4 234 aa15.01□□□□□ -0.01
SRGAP3-201ENST00000360413 HS1BP3Q53T59 392 aa15.01□□□□□ -0.01
SRGAP3-201ENST00000360413 SYCP3Q8IZU3 236 aa15.01□□□□□ -0.01
SRGAP3-201ENST00000360413 CECR2Q9BXF3 1484 aa15.01□□□□□ -0.01
SRGAP3-201ENST00000360413 INPP5BP32019 993 aa15.01□□□□□ -0.01
SRGAP3-201ENST00000360413 CCDC186Q7Z3E2 898 aa15.01□□□□□ -0.01
SRGAP3-201ENST00000360413 TTF1Q15361 905 aaPredicted RBP15.01□□□□□ -0.01
SRGAP3-201ENST00000360413 ESCO1Q5FWF5 840 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms