RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 NAA30Q147X3 362 aaPredicted RBP11.24□□□□□ -0.61
SMARCAL1-202ENST00000358207 MCTP1Q6DN14 999 aa11.24□□□□□ -0.61
SMARCAL1-202ENST00000358207 KIF18AQ8NI77 898 aa11.24□□□□□ -0.61
SMARCAL1-202ENST00000358207 GPT2Q8TD30 523 aa11.24□□□□□ -0.61
SMARCAL1-202ENST00000358207 AMPHP49418 695 aa11.23□□□□□ -0.61
SMARCAL1-202ENST00000358207 SMC4Q9NTJ3 1288 aa11.23□□□□□ -0.61
SMARCAL1-202ENST00000358207 MRC1P22897 1456 aa11.23□□□□□ -0.61
SMARCAL1-202ENST00000358207 IL2RBP14784 551 aa11.23□□□□□ -0.61
SMARCAL1-202ENST00000358207 SULT6B1Q6IMI4 303 aa11.23□□□□□ -0.61
SMARCAL1-202ENST00000358207 LRSAM1Q6UWE0 723 aa11.23□□□□□ -0.61
SMARCAL1-202ENST00000358207 DLEC1Q9Y238 1755 aa11.23□□□□□ -0.61
SMARCAL1-202ENST00000358207 SYCE3A1L190 88 aa11.22□□□□□ -0.61
SMARCAL1-202ENST00000358207 TMEM63CQ9P1W3 806 aa11.22□□□□□ -0.61
SMARCAL1-202ENST00000358207 COG6Q9Y2V7 657 aa11.22□□□□□ -0.61
SMARCAL1-202ENST00000358207 TJP1Q07157 1748 aa11.22□□□□□ -0.61
SMARCAL1-202ENST00000358207 IRF6O14896 467 aa11.22□□□□□ -0.61
SMARCAL1-202ENST00000358207 PROM2Q8N271 834 aa11.22□□□□□ -0.61
SMARCAL1-202ENST00000358207 PANK1Q8TE04 598 aa11.22□□□□□ -0.61
SMARCAL1-202ENST00000358207 PCDHB15Q9Y5E8 787 aa11.22□□□□□ -0.61
SMARCAL1-202ENST00000358207 FLT4P35916 1363 aa11.22□□□□□ -0.61
SMARCAL1-202ENST00000358207 C4AP0C0L4 1744 aa11.22□□□□□ -0.61
SMARCAL1-202ENST00000358207 ICE2Q659A1 982 aa11.22□□□□□ -0.61
SMARCAL1-202ENST00000358207 TOM1L2Q6ZVM7 507 aa11.22□□□□□ -0.61
SMARCAL1-202ENST00000358207 CEP83Q9Y592 693 aa11.22□□□□□ -0.61
SMARCAL1-202ENST00000358207 ZNF521Q96K83 1311 aa11.22□□□□□ -0.61
SMARCAL1-202ENST00000358207 GAS2L2Q8NHY3 880 aa11.21□□□□□ -0.61
SMARCAL1-202ENST00000358207 SLC16A10Q8TF71 515 aa11.21□□□□□ -0.61
SMARCAL1-202ENST00000358207 NSFL1CQ9UNZ2 370 aaKnown RBP11.21□□□□□ -0.61
SMARCAL1-202ENST00000358207 MAP3K19Q56UN5 1328 aa11.21□□□□□ -0.61
SMARCAL1-202ENST00000358207 CYP2C19P33261 490 aa11.21□□□□□ -0.62
SMARCAL1-202ENST00000358207 KRT222Q8N1A0 295 aa11.21□□□□□ -0.62
SMARCAL1-202ENST00000358207 AKT1S1Q96B36 256 aa11.21□□□□□ -0.62
SMARCAL1-202ENST00000358207 ZNF446Q9NWS9 450 aa11.21□□□□□ -0.62
SMARCAL1-202ENST00000358207 NRXN2Q9P2S2 1712 aa11.21□□□□□ -0.62
SMARCAL1-202ENST00000358207 ARFGEF1Q9Y6D6 1849 aa11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 PTGER2P43116 358 aa11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 TOMM22Q9NS69 142 aa11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 FAM53CQ9NYF3 392 aa11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 EXOC5O00471 708 aa11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 TRIM66O15016 1216 aa11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 TMPOP42166 694 aaKnown RBP11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 EIF4A2Q14240 407 aaKnown RBP11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 KIF2CQ99661 725 aa11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 SPON1Q9HCB6 807 aa11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 TNNQ9UQP3 1299 aa11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 HOXC9P31274 260 aa11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 SLFN5Q08AF3 891 aa11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 R3HDM1Q15032 1099 aaKnown RBP11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 NKX1-1Q15270 411 aaPredicted RBP11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 ANKRD24Q8TF21 1146 aa11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 RASSF4Q9H2L5 321 aa11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 DIAPH3Q9NSV4 1193 aa11.2□□□□□ -0.62
SMARCAL1-202ENST00000358207 CCDC172P0C7W6 258 aa11.19□□□□□ -0.62
SMARCAL1-202ENST00000358207 GUCY2CP25092 1073 aa11.19□□□□□ -0.62
SMARCAL1-202ENST00000358207 TSGA10IPQ3SY00 556 aa11.19□□□□□ -0.62
SMARCAL1-202ENST00000358207 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.19□□□□□ -0.621e-6■□□□□ 9.8
SMARCAL1-202ENST00000358207 GPATCH11Q8N954 259 aa11.19□□□□□ -0.62
SMARCAL1-202ENST00000358207 MIS18AQ9NYP9 233 aa11.19□□□□□ -0.62
SMARCAL1-202ENST00000358207 PHF14O94880 888 aa11.18□□□□□ -0.62
SMARCAL1-202ENST00000358207 IL13P35225 146 aa11.18□□□□□ -0.62
SMARCAL1-202ENST00000358207 CHAMP1Q96JM3 812 aa11.18□□□□□ -0.62
SMARCAL1-202ENST00000358207 LCMT1Q9UIC8 334 aa11.18□□□□□ -0.62
SMARCAL1-202ENST00000358207 ARFGEF2Q9Y6D5 1785 aa11.17□□□□□ -0.62
SMARCAL1-202ENST00000358207 PRPF40AO75400 957 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-202ENST00000358207 PKP1Q13835 747 aa11.17□□□□□ -0.62
SMARCAL1-202ENST00000358207 SLC15A2Q16348 729 aa11.17□□□□□ -0.62
SMARCAL1-202ENST00000358207 DNAJC21Q5F1R6 531 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-202ENST00000358207 TRMT2AQ8IZ69 625 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-202ENST00000358207 MTFR1LQ9H019 292 aa11.17□□□□□ -0.62
SMARCAL1-202ENST00000358207 TXNRD1Q16881 649 aa11.17□□□□□ -0.62
SMARCAL1-202ENST00000358207 MCM10Q7L590 875 aa11.17□□□□□ -0.62
SMARCAL1-202ENST00000358207 PLEKHF1Q96S99 279 aa11.17□□□□□ -0.62
SMARCAL1-202ENST00000358207 RBM42Q9BTD8 480 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-202ENST00000358207 TRIM35Q9UPQ4 493 aa11.17□□□□□ -0.62
SMARCAL1-202ENST00000358207 C10orf67Q8IYJ2 551 aa11.16□□□□□ -0.62
SMARCAL1-202ENST00000358207 PYCARDQ9ULZ3 195 aa11.16□□□□□ -0.62
SMARCAL1-202ENST00000358207 K7ELQ4 463 aaPredicted RBP11.16□□□□□ -0.62
SMARCAL1-202ENST00000358207 PDE3AQ14432 1141 aa11.16□□□□□ -0.62
SMARCAL1-202ENST00000358207 KRT24Q2M2I5 525 aa11.16□□□□□ -0.62
SMARCAL1-202ENST00000358207 SYT10Q6XYQ8 523 aa11.16□□□□□ -0.62
SMARCAL1-202ENST00000358207 KIAA1524Q8TCG1 905 aa11.16□□□□□ -0.62
SMARCAL1-202ENST00000358207 KDRP35968 1356 aa11.15□□□□□ -0.62
SMARCAL1-202ENST00000358207 SYCP1Q15431 976 aa11.15□□□□□ -0.62
SMARCAL1-202ENST00000358207 STK32BQ9NY57 414 aa11.15□□□□□ -0.62
SMARCAL1-202ENST00000358207 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.15□□□□□ -0.62
SMARCAL1-202ENST00000358207 CASQ1P31415 396 aa11.15□□□□□ -0.62
SMARCAL1-202ENST00000358207 SATB1Q01826 763 aa11.15□□□□□ -0.62
SMARCAL1-202ENST00000358207 EXOSC9Q06265 439 aaKnown RBP11.15□□□□□ -0.62
SMARCAL1-202ENST00000358207 KMT5BQ4FZB7 885 aa11.15□□□□□ -0.62
SMARCAL1-202ENST00000358207 RNF217Q8TC41 542 aa11.15□□□□□ -0.62
SMARCAL1-202ENST00000358207 CYP2E1P05181 493 aaPredicted RBP11.15□□□□□ -0.63
SMARCAL1-202ENST00000358207 CHAF1AQ13111 956 aaPredicted RBP11.15□□□□□ -0.63
SMARCAL1-202ENST00000358207 ATG3Q9NT62 314 aa11.15□□□□□ -0.63
SMARCAL1-202ENST00000358207 A0A0G2JS52 829 aa11.14□□□□□ -0.63
SMARCAL1-202ENST00000358207 PSDA5PKW4 1024 aaPredicted RBP11.14□□□□□ -0.63
SMARCAL1-202ENST00000358207 MYO1CO00159 1063 aa11.14□□□□□ -0.63
SMARCAL1-202ENST00000358207 KCNF1Q9H3M0 494 aa11.14□□□□□ -0.63
SMARCAL1-202ENST00000358207 SART3Q15020 963 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-202ENST00000358207 EYA1Q99502 592 aa11.14□□□□□ -0.63
SMARCAL1-202ENST00000358207 USP25Q9UHP3 1055 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms