RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 ZNF790Q6PG37 636 aa17.48■□□□□ 0.39
NIPAL3-203ENST00000358028 PI4KAP1Q8N8J0 262 aa17.48■□□□□ 0.39
NIPAL3-203ENST00000358028 ERC2O15083 957 aa17.47■□□□□ 0.39
NIPAL3-203ENST00000358028 REC8O95072 547 aa17.47■□□□□ 0.39
NIPAL3-203ENST00000358028 ANXA1P04083 346 aa17.47■□□□□ 0.39
NIPAL3-203ENST00000358028 TTC5Q8N0Z6 440 aa17.47■□□□□ 0.39
NIPAL3-203ENST00000358028 STAP2Q9UGK3 403 aa17.47■□□□□ 0.39
NIPAL3-203ENST00000358028 ISY1Q9ULR0 285 aaKnown RBP17.47■□□□□ 0.39
NIPAL3-203ENST00000358028 LAMB4A4D0S4 1761 aa17.47■□□□□ 0.39
NIPAL3-203ENST00000358028 RAB11FIP3O75154 756 aa17.46■□□□□ 0.39
NIPAL3-203ENST00000358028 C4AP0C0L4 1744 aa17.46■□□□□ 0.39
NIPAL3-203ENST00000358028 PPP1R42Q7Z4L9 355 aa17.46■□□□□ 0.39
NIPAL3-203ENST00000358028 AOX1Q06278 1338 aa17.46■□□□□ 0.39
NIPAL3-203ENST00000358028 FSD2A1L4K1 749 aa17.45■□□□□ 0.38
NIPAL3-203ENST00000358028 HSP90AA1P07900 732 aaKnown RBP17.45■□□□□ 0.38
NIPAL3-203ENST00000358028 AMIGO3Q86WK7 504 aa17.45■□□□□ 0.38
NIPAL3-203ENST00000358028 ZNF496Q96IT1 587 aaPredicted RBP17.45■□□□□ 0.38
NIPAL3-203ENST00000358028 NBPF7P0C2Y1 421 aaPredicted RBP17.45■□□□□ 0.38
NIPAL3-203ENST00000358028 PTGER2P43116 358 aa17.45■□□□□ 0.38
NIPAL3-203ENST00000358028 SKOR2Q2VWA4 1001 aaPredicted RBP17.45■□□□□ 0.38
NIPAL3-203ENST00000358028 TSHZ3Q63HK5 1081 aa17.45■□□□□ 0.38
NIPAL3-203ENST00000358028 TFCP2L1Q9NZI6 479 aa17.45■□□□□ 0.38
NIPAL3-203ENST00000358028 PNPLA7Q6ZV29 1317 aa17.45■□□□□ 0.38
NIPAL3-203ENST00000358028 GOLGA6L3A6NEY3 463 aa17.44■□□□□ 0.38
NIPAL3-203ENST00000358028 ZBTB7AO95365 584 aa17.44■□□□□ 0.38
NIPAL3-203ENST00000358028 SMIM5Q71RC9 77 aa17.44■□□□□ 0.38
NIPAL3-203ENST00000358028 DNAJC10Q8IXB1 793 aa17.44■□□□□ 0.38
NIPAL3-203ENST00000358028 TNPO1Q92973 898 aaKnown RBP17.44■□□□□ 0.38
NIPAL3-203ENST00000358028 ALDH1L1O75891 902 aa17.43■□□□□ 0.38
NIPAL3-203ENST00000358028 CLEC17AQ6ZS10 378 aa17.43■□□□□ 0.38
NIPAL3-203ENST00000358028 AK7Q96M32 723 aa17.43■□□□□ 0.38
NIPAL3-203ENST00000358028 SURF6O75683 361 aaKnown RBP17.43■□□□□ 0.38
NIPAL3-203ENST00000358028 PROSER3Q2NL68 480 aa17.43■□□□□ 0.38
NIPAL3-203ENST00000358028 KSR2Q6VAB6 950 aa17.43■□□□□ 0.38
NIPAL3-203ENST00000358028 HYPKQ9NX55 129 aa17.43■□□□□ 0.38
NIPAL3-203ENST00000358028 MAP3K2Q9Y2U5 619 aa17.43■□□□□ 0.38
NIPAL3-203ENST00000358028 PRAMEF22A3QJZ6 481 aa17.42■□□□□ 0.38
NIPAL3-203ENST00000358028 SRGAP3O43295 1099 aa17.42■□□□□ 0.38
NIPAL3-203ENST00000358028 FMNL2Q96PY5 1086 aa17.42■□□□□ 0.38
NIPAL3-203ENST00000358028 SGIP1Q9BQI5 828 aa17.42■□□□□ 0.38
NIPAL3-203ENST00000358028 ESYT1Q9BSJ8 1104 aa17.42■□□□□ 0.38
NIPAL3-203ENST00000358028 MTFR1LQ9H019 292 aa17.42■□□□□ 0.38
NIPAL3-203ENST00000358028 IL1RAPL2Q9NP60 686 aa17.42■□□□□ 0.38
NIPAL3-203ENST00000358028 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
NIPAL3-203ENST00000358028 CNTNAP4Q9C0A0 1308 aa17.42■□□□□ 0.38
NIPAL3-203ENST00000358028 COL24A1Q17RW2 1714 aa17.41■□□□□ 0.38
NIPAL3-203ENST00000358028 GNPATO15228 680 aa17.41■□□□□ 0.38
NIPAL3-203ENST00000358028 VSIG10Q8N0Z9 540 aa17.41■□□□□ 0.38
NIPAL3-203ENST00000358028 RHPN1Q8TCX5 695 aa17.41■□□□□ 0.38
NIPAL3-203ENST00000358028 TRIM6-TRIM34B2RNG4 842 aa17.4■□□□□ 0.38
NIPAL3-203ENST00000358028 PHF14O94880 888 aa17.4■□□□□ 0.38
NIPAL3-203ENST00000358028 CRKLP46109 303 aaKnown RBP17.4■□□□□ 0.38
NIPAL3-203ENST00000358028 FAM43AQ8N2R8 423 aa17.4■□□□□ 0.38
NIPAL3-203ENST00000358028 KIF1BPQ96EK5 621 aa17.4■□□□□ 0.38
NIPAL3-203ENST00000358028 FOXD4L1Q9NU39 408 aa17.4■□□□□ 0.38
NIPAL3-203ENST00000358028 CYP19A1P11511 503 aaPredicted RBP17.4■□□□□ 0.38
NIPAL3-203ENST00000358028 CHMLP26374 656 aa17.4■□□□□ 0.38
NIPAL3-203ENST00000358028 MTX1Q13505 466 aa17.4■□□□□ 0.38
NIPAL3-203ENST00000358028 HSP90AB4PQ58FF6 505 aa17.4■□□□□ 0.38
NIPAL3-203ENST00000358028 RILPL2Q969X0 211 aa17.4■□□□□ 0.38
NIPAL3-203ENST00000358028 DDX21Q9NR30 783 aaKnown RBP eCLIP17.4■□□□□ 0.38
NIPAL3-203ENST00000358028 ATF5Q9Y2D1 282 aaPredicted RBP17.4■□□□□ 0.38
NIPAL3-203ENST00000358028 AK9Q5TCS8 1911 aa17.39■□□□□ 0.38
NIPAL3-203ENST00000358028 HMGB2P26583 209 aaKnown RBP17.39■□□□□ 0.37
NIPAL3-203ENST00000358028 COL23A1Q86Y22 540 aaPredicted RBP17.39■□□□□ 0.37
NIPAL3-203ENST00000358028 NUTM1Q86Y26 1132 aa17.39■□□□□ 0.37
NIPAL3-203ENST00000358028 ST18O60284 1047 aa17.38■□□□□ 0.37
NIPAL3-203ENST00000358028 DDX58O95786 925 aaKnown RBP17.38■□□□□ 0.37
NIPAL3-203ENST00000358028 RC3H1Q5TC82 1133 aaKnown RBP17.38■□□□□ 0.37
NIPAL3-203ENST00000358028 CWC22Q9HCG8 908 aaKnown RBP17.38■□□□□ 0.37
NIPAL3-203ENST00000358028 HDAC5Q9UQL6 1122 aa17.38■□□□□ 0.37
NIPAL3-203ENST00000358028 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.38■□□□□ 0.37
NIPAL3-203ENST00000358028 GOLGA6L22H0YM25 854 aa17.38■□□□□ 0.37
NIPAL3-203ENST00000358028 MRE11P49959 708 aa17.38■□□□□ 0.37
NIPAL3-203ENST00000358028 NUCB2P80303 420 aa17.38■□□□□ 0.37
NIPAL3-203ENST00000358028 PDIA6Q15084 440 aa17.38■□□□□ 0.37
NIPAL3-203ENST00000358028 INTS5Q6P9B9 1019 aaKnown RBP17.38■□□□□ 0.37
NIPAL3-203ENST00000358028 C9orf78Q9NZ63 289 aaPredicted RBP17.38■□□□□ 0.37
NIPAL3-203ENST00000358028 SSFA2P28290 1259 aa17.37■□□□□ 0.37
NIPAL3-203ENST00000358028 LINS1Q8NG48 757 aa17.36■□□□□ 0.37
NIPAL3-203ENST00000358028 CCDC87Q9NVE4 849 aa17.36■□□□□ 0.37
NIPAL3-203ENST00000358028 ZBTB1Q9Y2K1 713 aa17.36■□□□□ 0.37
NIPAL3-203ENST00000358028 RTCBQ9Y3I0 505 aaKnown RBP17.36■□□□□ 0.37
NIPAL3-203ENST00000358028 MCCP23508 829 aa17.35■□□□□ 0.37
NIPAL3-203ENST00000358028 CWF19L2Q2TBE0 894 aaKnown RBP17.35■□□□□ 0.37
NIPAL3-203ENST00000358028 PI4K2BQ8TCG2 481 aa17.35■□□□□ 0.37
NIPAL3-203ENST00000358028 USP16Q9Y5T5 823 aa17.35■□□□□ 0.37
NIPAL3-203ENST00000358028 UTYO14607 1347 aa17.35■□□□□ 0.37
NIPAL3-203ENST00000358028 EPB41L2O43491 1005 aaKnown RBP17.35■□□□□ 0.37
NIPAL3-203ENST00000358028 RPS6KA4O75676 772 aa17.35■□□□□ 0.37
NIPAL3-203ENST00000358028 SNRPA1P09661 255 aaKnown RBP17.35■□□□□ 0.37
NIPAL3-203ENST00000358028 XRCC6P12956 609 aaKnown RBP eCLIP17.35■□□□□ 0.37
NIPAL3-203ENST00000358028 SLC16A10Q8TF71 515 aa17.35■□□□□ 0.37
NIPAL3-203ENST00000358028 RTN4Q9NQC3 1192 aaKnown RBP17.35■□□□□ 0.37
NIPAL3-203ENST00000358028 USP42Q9H9J4 1324 aaKnown RBP17.34■□□□□ 0.37
NIPAL3-203ENST00000358028 UTRNP46939 3433 aa17.34■□□□□ 0.37
NIPAL3-203ENST00000358028 STARD3NLO95772 234 aa17.34■□□□□ 0.37
NIPAL3-203ENST00000358028 AIMP1Q12904 312 aaKnown RBP17.34■□□□□ 0.37
NIPAL3-203ENST00000358028 OS9Q13438 667 aaPredicted RBP17.34■□□□□ 0.37
NIPAL3-203ENST00000358028 FLAD1Q8NFF5 587 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms