RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 SLC10A5Q5PT55 438 aa13.41□□□□□ -0.26
LINC01560-201ENST00000357412 COPS6Q7L5N1 327 aa13.41□□□□□ -0.26
LINC01560-201ENST00000357412 PPP1R42Q7Z4L9 355 aa13.41□□□□□ -0.26
LINC01560-201ENST00000357412 LDHDQ86WU2 507 aa13.41□□□□□ -0.26
LINC01560-201ENST00000357412 UTP14AQ9BVJ6 771 aaKnown RBP13.41□□□□□ -0.26
LINC01560-201ENST00000357412 TRIM35Q9UPQ4 493 aa13.41□□□□□ -0.26
LINC01560-201ENST00000357412 RIC1Q4ADV7 1423 aa13.4□□□□□ -0.26
LINC01560-201ENST00000357412 ANKRD31Q8N7Z5 1873 aa13.4□□□□□ -0.26
LINC01560-201ENST00000357412 COL11A2P13942 1736 aaPredicted RBP13.4□□□□□ -0.26
LINC01560-201ENST00000357412 COL13A1Q5TAT6 717 aaPredicted RBP13.4□□□□□ -0.26
LINC01560-201ENST00000357412 XAGE3Q8WTP9 111 aa13.4□□□□□ -0.26
LINC01560-201ENST00000357412 NECTIN2Q92692 538 aa13.4□□□□□ -0.26
LINC01560-201ENST00000357412 RUNDC1Q96C34 613 aa13.4□□□□□ -0.26
LINC01560-201ENST00000357412 RBM17Q96I25 401 aaKnown RBP13.4□□□□□ -0.26
LINC01560-201ENST00000357412 CREBZFQ9NS37 354 aa13.4□□□□□ -0.26
LINC01560-201ENST00000357412 DLEC1Q9Y238 1755 aa13.4□□□□□ -0.26
LINC01560-201ENST00000357412 PASKQ96RG2 1323 aa13.39□□□□□ -0.27
LINC01560-201ENST00000357412 PPEF1O14829 653 aaPredicted RBP13.39□□□□□ -0.27
LINC01560-201ENST00000357412 EPHX2P34913 555 aa13.39□□□□□ -0.27
LINC01560-201ENST00000357412 GRIPAP1Q4V328 841 aa13.39□□□□□ -0.27
LINC01560-201ENST00000357412 GPC2Q8N158 579 aa13.39□□□□□ -0.27
LINC01560-201ENST00000357412 JDP2Q8WYK2 163 aa13.39□□□□□ -0.27
LINC01560-201ENST00000357412 NLRP3Q96P20 1036 aa13.39□□□□□ -0.27
LINC01560-201ENST00000357412 HACL1Q9UJ83 578 aa13.39□□□□□ -0.27
LINC01560-201ENST00000357412 ADAMTS8Q9UP79 889 aa13.39□□□□□ -0.27
LINC01560-201ENST00000357412 RNF123Q5XPI4 1314 aa13.39□□□□□ -0.27
LINC01560-201ENST00000357412 TCERG1O14776 1098 aaKnown RBP13.38□□□□□ -0.27
LINC01560-201ENST00000357412 ITGBL1O95965 494 aaPredicted RBP13.38□□□□□ -0.27
LINC01560-201ENST00000357412 AIMP1Q12904 312 aaKnown RBP13.38□□□□□ -0.27
LINC01560-201ENST00000357412 EAPPQ56P03 285 aaPredicted RBP13.38□□□□□ -0.27
LINC01560-201ENST00000357412 HSP90AB3PQ58FF7 597 aa13.38□□□□□ -0.27
LINC01560-201ENST00000357412 NLRP10Q86W26 655 aa13.38□□□□□ -0.27
LINC01560-201ENST00000357412 DDX21Q9NR30 783 aaKnown RBP eCLIP13.38□□□□□ -0.27
LINC01560-201ENST00000357412 WDR90Q96KV7 1748 aa13.38□□□□□ -0.27
LINC01560-201ENST00000357412 BCORQ6W2J9 1755 aa13.37□□□□□ -0.27
LINC01560-201ENST00000357412 TNRC6CQ9HCJ0 1690 aaKnown RBP13.37□□□□□ -0.27
LINC01560-201ENST00000357412 SLX4Q8IY92 1834 aa13.37□□□□□ -0.27
LINC01560-201ENST00000357412 HSPA1AP0DMV8 641 aaKnown RBP13.37□□□□□ -0.27
LINC01560-201ENST00000357412 HSPA1BP0DMV9 641 aaKnown RBP13.37□□□□□ -0.27
LINC01560-201ENST00000357412 TCIRG1Q13488 830 aa13.37□□□□□ -0.27
LINC01560-201ENST00000357412 WDR43Q15061 677 aaKnown RBP eCLIP13.37□□□□□ -0.27
LINC01560-201ENST00000357412 LARGE2Q8N3Y3 721 aa13.37□□□□□ -0.27
LINC01560-201ENST00000357412 MKRN1Q9UHC7 482 aaKnown RBP13.37□□□□□ -0.27
LINC01560-201ENST00000357412 ATP6V0A2Q9Y487 856 aa13.37□□□□□ -0.27
LINC01560-201ENST00000357412 PCNTO95613 3336 aa13.36□□□□□ -0.27
LINC01560-201ENST00000357412 HCLS1P14317 486 aaPredicted RBP13.36□□□□□ -0.27
LINC01560-201ENST00000357412 EIF6P56537 245 aaKnown RBP13.36□□□□□ -0.27
LINC01560-201ENST00000357412 PNMA8AQ86V59 439 aaPredicted RBP13.36□□□□□ -0.27
LINC01560-201ENST00000357412 CHPF2Q9P2E5 772 aa13.36□□□□□ -0.27
LINC01560-201ENST00000357412 LAS1LQ9Y4W2 734 aaKnown RBP13.36□□□□□ -0.27
LINC01560-201ENST00000357412 ABCC4O15439 1325 aa13.36□□□□□ -0.27
LINC01560-201ENST00000357412 SBF1O95248 1867 aa13.36□□□□□ -0.27
LINC01560-201ENST00000357412 HOXB7P09629 217 aa13.35□□□□□ -0.27
LINC01560-201ENST00000357412 SCNN1DP51172 638 aa13.35□□□□□ -0.27
LINC01560-201ENST00000357412 HDGFL1Q5TGJ6 251 aa13.35□□□□□ -0.27
LINC01560-201ENST00000357412 PRKRIP1Q9H875 184 aaPredicted RBP13.35□□□□□ -0.27
LINC01560-201ENST00000357412 CLEC11AQ9Y240 323 aa13.35□□□□□ -0.27
LINC01560-201ENST00000357412 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
LINC01560-201ENST00000357412 TMEM88BA6NKF7 163 aa13.34□□□□□ -0.27
LINC01560-201ENST00000357412 PPIP5K2O43314 1243 aa13.34□□□□□ -0.27
LINC01560-201ENST00000357412 BBOX1O75936 387 aa13.34□□□□□ -0.27
LINC01560-201ENST00000357412 MAP1SQ66K74 1059 aaPredicted RBP13.34□□□□□ -0.27
LINC01560-201ENST00000357412 CNTROBQ8N137 903 aa13.34□□□□□ -0.27
LINC01560-201ENST00000357412 CFAP44Q96MT7 982 aa13.34□□□□□ -0.27
LINC01560-201ENST00000357412 RTFDC1Q9BY42 306 aaPredicted RBP13.34□□□□□ -0.27
LINC01560-201ENST00000357412 TRMT112Q9UI30 125 aaKnown RBP13.34□□□□□ -0.27
LINC01560-201ENST00000357412 SH3TC1Q8TE82 1336 aa13.34□□□□□ -0.27
LINC01560-201ENST00000357412 CNTNAP1P78357 1384 aa13.33□□□□□ -0.27
LINC01560-201ENST00000357412 ZNF853P0CG23 659 aa13.33□□□□□ -0.28
LINC01560-201ENST00000357412 EPS15P42566 896 aa13.33□□□□□ -0.28
LINC01560-201ENST00000357412 AOC3Q16853 763 aa13.33□□□□□ -0.28
LINC01560-201ENST00000357412 ANKRD13DQ6ZTN6 518 aa13.33□□□□□ -0.28
LINC01560-201ENST00000357412 SP8Q8IXZ3 490 aa13.33□□□□□ -0.28
LINC01560-201ENST00000357412 NIM1KQ8IY84 436 aa13.33□□□□□ -0.28
LINC01560-201ENST00000357412 PLBD2Q8NHP8 589 aa13.33□□□□□ -0.28
LINC01560-201ENST00000357412 ISCA1Q9BUE6 129 aa13.33□□□□□ -0.28
LINC01560-201ENST00000357412 TMX4Q9H1E5 349 aaPredicted RBP13.33□□□□□ -0.28
LINC01560-201ENST00000357412 VPS33BQ9H267 617 aa13.33□□□□□ -0.28
LINC01560-201ENST00000357412 COL4A5P29400 1685 aa13.33□□□□□ -0.28
LINC01560-201ENST00000357412 VIRMAQ69YN4 1812 aaKnown RBP13.32□□□□□ -0.28
LINC01560-201ENST00000357412 FER1L6Q2WGJ9 1857 aa13.32□□□□□ -0.28
LINC01560-201ENST00000357412 GRAPQ13588 217 aa13.32□□□□□ -0.28
LINC01560-201ENST00000357412 DUSP27Q5VZP5 1158 aa13.32□□□□□ -0.28
LINC01560-201ENST00000357412 GRAPLQ8TC17 118 aaPredicted RBP13.32□□□□□ -0.28
LINC01560-201ENST00000357412 ZNF428Q96B54 188 aa13.32□□□□□ -0.28
LINC01560-201ENST00000357412 MBIPQ9NS73 344 aa13.32□□□□□ -0.28
LINC01560-201ENST00000357412 DBF4Q9UBU7 674 aaPredicted RBP13.32□□□□□ -0.28
LINC01560-201ENST00000357412 KDM3BQ7LBC6 1761 aa13.32□□□□□ -0.28
LINC01560-201ENST00000357412 TIAM2Q8IVF5 1701 aa13.31□□□□□ -0.28
LINC01560-201ENST00000357412 LMOD1P29536 600 aaPredicted RBP13.31□□□□□ -0.28
LINC01560-201ENST00000357412 DPP8Q6V1X1 898 aaPredicted RBP13.31□□□□□ -0.28
LINC01560-201ENST00000357412 DDX46Q7L014 1031 aaKnown RBP13.31□□□□□ -0.28
LINC01560-201ENST00000357412 MPNDQ8N594 471 aa13.31□□□□□ -0.28
LINC01560-201ENST00000357412 SUPT20HQ8NEM7 779 aa13.31□□□□□ -0.28
LINC01560-201ENST00000357412 ZNRF3Q9ULT6 936 aa13.31□□□□□ -0.28
LINC01560-201ENST00000357412 ATP5J2-PTCD1G3V325 749 aa13.3□□□□□ -0.28
LINC01560-201ENST00000357412 APAF1O14727 1248 aa13.3□□□□□ -0.28
LINC01560-201ENST00000357412 VEGFBP49765 207 aa13.3□□□□□ -0.28
LINC01560-201ENST00000357412 CXCL9Q07325 125 aa13.3□□□□□ -0.28
LINC01560-201ENST00000357412 KIAA2012Q0VF49 1180 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms