RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 NUCB1Q02818 461 aa5.34□□□□□ -1.55
SYNE2-203ENST00000357395 PLCB1Q9NQ66 1216 aa5.34□□□□□ -1.55
SYNE2-203ENST00000357395 HNRNPCL1O60812 293 aaKnown RBP5.34□□□□□ -1.55
SYNE2-203ENST00000357395 GNAI3P08754 354 aa5.34□□□□□ -1.55
SYNE2-203ENST00000357395 SOS1Q07889 1333 aaPredicted RBP5.34□□□□□ -1.55
SYNE2-203ENST00000357395 SP100P23497 879 aaPredicted RBP5.34□□□□□ -1.55
SYNE2-203ENST00000357395 CCAR1Q8IX12 1150 aaKnown RBP5.34□□□□□ -1.55
SYNE2-203ENST00000357395 CCDC43Q96MW1 224 aaKnown RBP5.34□□□□□ -1.55
SYNE2-203ENST00000357395 HFM1A2PYH4 1435 aa5.34□□□□□ -1.55
SYNE2-203ENST00000357395 ARHGAP10A1A4S6 786 aa5.34□□□□□ -1.55
SYNE2-203ENST00000357395 BMP2KQ9NSY1 1161 aaPredicted RBP5.34□□□□□ -1.55
SYNE2-203ENST00000357395 MPHOSPH8Q99549 860 aa5.34□□□□□ -1.55
SYNE2-203ENST00000357395 MIS18AQ9NYP9 233 aa5.34□□□□□ -1.55
SYNE2-203ENST00000357395 ABCC9O60706 1549 aa5.34□□□□□ -1.55
SYNE2-203ENST00000357395 PPFIA4O75335 1185 aa5.34□□□□□ -1.55
SYNE2-203ENST00000357395 INPP5BP32019 993 aa5.34□□□□□ -1.55
SYNE2-203ENST00000357395 ACTR5Q9H9F9 607 aaPredicted RBP5.34□□□□□ -1.55
SYNE2-203ENST00000357395 ZNF189O75820 626 aaPredicted RBP5.34□□□□□ -1.56
SYNE2-203ENST00000357395 KRT18P05783 430 aaKnown RBP5.34□□□□□ -1.56
SYNE2-203ENST00000357395 MTMR3Q13615 1198 aa5.34□□□□□ -1.56
SYNE2-203ENST00000357395 LRSAM1Q6UWE0 723 aa5.34□□□□□ -1.56
SYNE2-203ENST00000357395 TCEAL9Q9UHQ7 104 aa5.34□□□□□ -1.56
SYNE2-203ENST00000357395 BMP2KLQ5H9B9 411 aa5.34□□□□□ -1.56
SYNE2-203ENST00000357395 MIER3Q7Z3K6 550 aa5.34□□□□□ -1.56
SYNE2-203ENST00000357395 HVCN1Q96D96 273 aa5.34□□□□□ -1.56
SYNE2-203ENST00000357395 FSD1Q9BTV5 496 aa5.34□□□□□ -1.56
SYNE2-203ENST00000357395 XRCC6P12956 609 aaKnown RBP eCLIP5.34□□□□□ -1.56
SYNE2-203ENST00000357395 GNAI1P63096 354 aa5.34□□□□□ -1.56
SYNE2-203ENST00000357395 NBPF20Q3BBV1 942 aa5.34□□□□□ -1.56
SYNE2-203ENST00000357395 TMEM232C9JQI7 657 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 DIAPH1O60610 1272 aaKnown RBP5.33□□□□□ -1.56
SYNE2-203ENST00000357395 U2AF1L5P0DN76 240 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-203ENST00000357395 U2AF1Q01081 240 aaKnown RBP eCLIP5.33□□□□□ -1.56
SYNE2-203ENST00000357395 TAOK1Q7L7X3 1001 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 SELENOOQ9BVL4 669 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 ATP2A1O14983 1001 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 GTF2E1P29083 439 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-203ENST00000357395 TICAM2Q86XR7 235 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.33□□□□□ -1.56
SYNE2-203ENST00000357395 C3orf20Q8ND61 904 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 GABPB2Q8TAK5 448 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-203ENST00000357395 DCAF11Q8TEB1 546 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 EXOC4Q96A65 974 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 USP47Q96K76 1375 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 ZNF445P59923 1031 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 USP37Q86T82 979 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 CENPKQ9BS16 269 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 PRDM10Q9NQV6 1147 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 MAP3K1Q13233 1512 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 TSPYL2Q9H2G4 693 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-203ENST00000357395 PARP2Q9UGN5 583 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 NRBF2Q96F24 287 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 DIABLOQ9NR28 239 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 TERB1Q8NA31 727 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 SYCP2LQ5T4T6 812 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 MSANTD4Q8NCY6 345 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 POGKQ9P215 609 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 ARHGAP31Q2M1Z3 1444 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 SLU7O95391 586 aaKnown RBP5.33□□□□□ -1.56
SYNE2-203ENST00000357395 FCHSD1Q86WN1 690 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 ZMYM4Q5VZL5 1548 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 PRC1O43663 620 aa5.33□□□□□ -1.56
SYNE2-203ENST00000357395 CWC27Q6UX04 472 aaKnown RBP5.33□□□□□ -1.56
SYNE2-203ENST00000357395 CCDC144CPQ8IYA2 1237 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 CNOT10Q9H9A5 744 aaKnown RBP5.32□□□□□ -1.56
SYNE2-203ENST00000357395 TTC36A6NLP5 189 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 SMIM24O75264 130 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 SATB1Q01826 763 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 MCTP2Q6DN12 878 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 USP6NLQ92738 828 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 DNAI1Q9UI46 699 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 TEKT2Q9UIF3 430 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 NT5C2P49902 561 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 TUBA4AP68366 448 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 TEX9Q8N6V9 391 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 SPDL1Q96EA4 605 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.32□□□□□ -1.56
SYNE2-203ENST00000357395 CYP46A1Q9Y6A2 500 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 LRRD1A4D1F6 860 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 GORABQ5T7V8 394 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 CABS1Q96KC9 395 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 ZC4H2Q9NQZ6 224 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 EFCAB8A8MWE9 144 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 ATP5HO75947 161 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 ALDH1L2Q3SY69 923 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 CLNS1AP54105 237 aaKnown RBP5.32□□□□□ -1.56
SYNE2-203ENST00000357395 EIF2S2P20042 333 aaKnown RBP5.32□□□□□ -1.56
SYNE2-203ENST00000357395 CCT4P50991 539 aaKnown RBP5.32□□□□□ -1.56
SYNE2-203ENST00000357395 KCNG4Q8TDN1 519 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 PSMA4P25789 261 aaKnown RBP5.32□□□□□ -1.56
SYNE2-203ENST00000357395 NOLC1Q14978 699 aaKnown RBP eCLIP5.32□□□□□ -1.56
SYNE2-203ENST00000357395 ICE2Q659A1 982 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 MCF2L2Q86YR7 1114 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 ENO4A6NNW6 628 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 GPR161Q8N6U8 529 aaKnown RBP5.32□□□□□ -1.56
SYNE2-203ENST00000357395 SPATA32Q96LK8 384 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 LRRFIP2Q9Y608 721 aaKnown RBP5.32□□□□□ -1.56
SYNE2-203ENST00000357395 NOP14P78316 857 aaKnown RBP5.32□□□□□ -1.56
SYNE2-203ENST00000357395 CNGA4Q8IV77 575 aa5.32□□□□□ -1.56
SYNE2-203ENST00000357395 FAM71BQ8TC56 605 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms