RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 FAM200AQ8TCP9 573 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 NBPF4Q96M43 638 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 NEK1Q96PY6 1258 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 ZHX1Q9UKY1 873 aaPredicted RBP8.05□□□□□ -1.12
RTN4-203ENST00000357376 ALKQ9UM73 1620 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 ARHGEF10O15013 1369 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 ARHGEF40Q8TER5 1519 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 GOLIM4O00461 696 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 ZNF500O60304 480 aaPredicted RBP8.05□□□□□ -1.12
RTN4-203ENST00000357376 COPS6Q7L5N1 327 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 ANKRD24Q8TF21 1146 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 XAGE3Q8WTP9 111 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 ZNF396Q96N95 335 aaPredicted RBP8.05□□□□□ -1.12
RTN4-203ENST00000357376 NAT10Q9H0A0 1025 aaKnown RBP8.05□□□□□ -1.12
RTN4-203ENST00000357376 ARHGAP31Q2M1Z3 1444 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 CYP2E1P05181 493 aaPredicted RBP8.05□□□□□ -1.12
RTN4-203ENST00000357376 TNNT1P13805 278 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 ATP2B1P20020 1258 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 CABP4P57796 275 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 CDC37L1Q7L3B6 337 aa8.05□□□□□ -1.12
RTN4-203ENST00000357376 DDX19AQ9NUU7 478 aaKnown RBP8.05□□□□□ -1.12
RTN4-203ENST00000357376 RGS12O14924 1447 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 LARGE1O95461 756 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 ME3Q16798 604 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 CPLX2Q6PUV4 134 aaKnown RBP8.04□□□□□ -1.12
RTN4-203ENST00000357376 PROSER2Q86WR7 435 aaPredicted RBP8.04□□□□□ -1.12
RTN4-203ENST00000357376 STAP2Q9UGK3 403 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 COL3A1P02461 1466 aaPredicted RBP8.04□□□□□ -1.12
RTN4-203ENST00000357376 DEPDC5O75140 1603 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 EIF4A1P60842 406 aaKnown RBP8.04□□□□□ -1.12
RTN4-203ENST00000357376 LRRFIP1Q32MZ4 808 aaKnown RBP8.04□□□□□ -1.12
RTN4-203ENST00000357376 AKAP4Q5JQC9 854 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 CCDC129Q6ZRS4 1044 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 CLEC17AQ6ZS10 378 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 CHST3Q7LGC8 479 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 PRIMPOLQ96LW4 560 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 CFAP74Q9C0B2 1584 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 SNRKQ9NRH2 765 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 SHPRHQ149N8 1683 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 ZC3H13Q5T200 1668 aaKnown RBP8.04□□□□□ -1.12
RTN4-203ENST00000357376 ATP10DQ9P241 1426 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 CPSF1Q10570 1443 aaKnown RBP8.04□□□□□ -1.12
RTN4-203ENST00000357376 TMEM2Q9UHN6 1383 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 HAND2P61296 217 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 TRIM29Q14134 588 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 Q6ZUG5 572 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 CEP57L1Q8IYX8 460 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 LINS1Q8NG48 757 aa8.04□□□□□ -1.12
RTN4-203ENST00000357376 AOX1Q06278 1338 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 BIN1O00499 593 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 ALDH1L1O75891 902 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 CDK11BP21127 795 aaKnown RBP8.03□□□□□ -1.12
RTN4-203ENST00000357376 ANKLE2Q86XL3 938 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 LSG1Q9H089 658 aaKnown RBP8.03□□□□□ -1.12
RTN4-203ENST00000357376 SLC27A2O14975 620 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 TTC39AQ5SRH9 613 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 FAM177A1Q8N128 213 aaPredicted RBP8.03□□□□□ -1.12
RTN4-203ENST00000357376 FSIP1Q8NA03 581 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 PIBF1Q8WXW3 757 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 CHMP4CQ96CF2 233 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 SUCLG2Q96I99 432 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 MROH1Q8NDA8 1641 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 USP6P35125 1406 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 IGSF1Q8N6C5 1336 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 PROSER3Q2NL68 480 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 BEND3Q5T5X7 828 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 CCAR1Q8IX12 1150 aaKnown RBP8.03□□□□□ -1.12
RTN4-203ENST00000357376 SYTL4Q96C24 671 aaPredicted RBP8.03□□□□□ -1.12
RTN4-203ENST00000357376 IL25Q9H293 177 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 MTMR6Q9Y217 621 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 CD163L1Q9NR16 1453 aa8.03□□□□□ -1.12
RTN4-203ENST00000357376 JAK2O60674 1132 aa8.02□□□□□ -1.12
RTN4-203ENST00000357376 POLR3DP05423 398 aaPredicted RBP8.02□□□□□ -1.12
RTN4-203ENST00000357376 ISM2Q6H9L7 571 aa8.02□□□□□ -1.12
RTN4-203ENST00000357376 ANKRD13DQ6ZTN6 518 aa8.02□□□□□ -1.12
RTN4-203ENST00000357376 PDILTQ8N807 584 aa8.02□□□□□ -1.12
RTN4-203ENST00000357376 TPCN1Q9ULQ1 816 aa8.02□□□□□ -1.12
RTN4-203ENST00000357376 U3KPZ7 1027 aaPredicted RBP8.02□□□□□ -1.12
RTN4-203ENST00000357376 IGSF3O75054 1194 aa8.02□□□□□ -1.13
RTN4-203ENST00000357376 IFIT1P09914 478 aaKnown RBP8.02□□□□□ -1.13
RTN4-203ENST00000357376 ATF3P18847 181 aa8.02□□□□□ -1.13
RTN4-203ENST00000357376 LIG1P18858 919 aa8.02□□□□□ -1.13
RTN4-203ENST00000357376 ZBTB3Q9H5J0 574 aa8.02□□□□□ -1.13
RTN4-203ENST00000357376 A2ML1A8K2U0 1454 aa8.02□□□□□ -1.13
RTN4-203ENST00000357376 SSH2Q76I76 1423 aa8.02□□□□□ -1.13
RTN4-203ENST00000357376 MYO3AQ8NEV4 1616 aa8.02□□□□□ -1.13
RTN4-203ENST00000357376 NPHP3Q7Z494 1330 aa8.02□□□□□ -1.13
RTN4-203ENST00000357376 A0A0D9SFI3 127 aa8.02□□□□□ -1.13
RTN4-203ENST00000357376 PRAMEF22A3QJZ6 481 aa8.02□□□□□ -1.13
RTN4-203ENST00000357376 RNMTO43148 476 aaKnown RBP8.02□□□□□ -1.13
RTN4-203ENST00000357376 CCDC158Q5M9N0 1113 aa8.02□□□□□ -1.13
RTN4-203ENST00000357376 NFATC2IPQ8NCF5 419 aa8.02□□□□□ -1.13
RTN4-203ENST00000357376 IP6K1Q92551 441 aa8.02□□□□□ -1.13
RTN4-203ENST00000357376 EAF2Q96CJ1 260 aaPredicted RBP8.02□□□□□ -1.13
RTN4-203ENST00000357376 CEP126Q9P2H0 1117 aa8.02□□□□□ -1.13
RTN4-203ENST00000357376 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.02□□□□□ -1.13
RTN4-203ENST00000357376 V9GYY5 206 aaPredicted RBP8.02□□□□□ -1.13
RTN4-203ENST00000357376 ADGRB2O60241 1585 aa8.02□□□□□ -1.13
RTN4-203ENST00000357376 TFCP2Q12800 502 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 PTPN14Q15678 1187 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms