RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 FSIP1Q8NA03 581 aa14.69□□□□□ -0.06
BDNF-202ENST00000356660 BRF1Q92994 677 aa14.69□□□□□ -0.06
BDNF-202ENST00000356660 ZBTB22O15209 634 aa14.68□□□□□ -0.06
BDNF-202ENST00000356660 TRDNQ13061 729 aa14.68□□□□□ -0.06
BDNF-202ENST00000356660 RGS12O14924 1447 aa14.68□□□□□ -0.06
BDNF-202ENST00000356660 ZFYVE9O95405 1425 aa14.68□□□□□ -0.06
BDNF-202ENST00000356660 PTCD1O75127 700 aaKnown RBP14.68□□□□□ -0.06
BDNF-202ENST00000356660 CLSTN1O94985 981 aa14.68□□□□□ -0.06
BDNF-202ENST00000356660 PTH1RQ03431 593 aa14.68□□□□□ -0.06
BDNF-202ENST00000356660 AOPEPQ8N6M6 819 aa14.68□□□□□ -0.06
BDNF-202ENST00000356660 OSBPL3Q9H4L5 887 aa14.68□□□□□ -0.06
BDNF-202ENST00000356660 ANO10Q9NW15 660 aa14.68□□□□□ -0.06
BDNF-202ENST00000356660 SLU7O95391 586 aaKnown RBP14.68□□□□□ -0.06
BDNF-202ENST00000356660 HIP1O00291 1037 aa14.67□□□□□ -0.06
BDNF-202ENST00000356660 CPLX2Q6PUV4 134 aaKnown RBP14.67□□□□□ -0.06
BDNF-202ENST00000356660 SYT10Q6XYQ8 523 aa14.67□□□□□ -0.06
BDNF-202ENST00000356660 NCBP1Q09161 790 aaKnown RBP14.67□□□□□ -0.06
BDNF-202ENST00000356660 CREB3L3Q68CJ9 461 aa14.67□□□□□ -0.06
BDNF-202ENST00000356660 NFXL1Q6ZNB6 911 aa14.67□□□□□ -0.06
BDNF-202ENST00000356660 CACTINQ8WUQ7 758 aaKnown RBP14.67□□□□□ -0.06
BDNF-202ENST00000356660 DNAAF4Q8WXU2 420 aa14.67□□□□□ -0.06
BDNF-202ENST00000356660 ZNF396Q96N95 335 aaPredicted RBP14.67□□□□□ -0.06
BDNF-202ENST00000356660 KCNF1Q9H3M0 494 aa14.67□□□□□ -0.06
BDNF-202ENST00000356660 MTMR7Q9Y216 660 aa14.67□□□□□ -0.06
BDNF-202ENST00000356660 YTHDC2Q9H6S0 1430 aaKnown RBP14.67□□□□□ -0.06
BDNF-202ENST00000356660 NR1I2O75469 434 aa14.67□□□□□ -0.06
BDNF-202ENST00000356660 BMS1Q14692 1282 aaKnown RBP14.67□□□□□ -0.06
BDNF-202ENST00000356660 VPS53Q5VIR6 699 aa14.67□□□□□ -0.06
BDNF-202ENST00000356660 CERS3Q8IU89 383 aa14.67□□□□□ -0.06
BDNF-202ENST00000356660 CCDC171Q6TFL3 1326 aa14.66□□□□□ -0.06
BDNF-202ENST00000356660 VIRMAQ69YN4 1812 aaKnown RBP14.66□□□□□ -0.06
BDNF-202ENST00000356660 STX1AQ16623 288 aa14.66□□□□□ -0.06
BDNF-202ENST00000356660 DNAI1Q9UI46 699 aa14.66□□□□□ -0.06
BDNF-202ENST00000356660 MRVI1Q9Y6F6 885 aa14.66□□□□□ -0.06
BDNF-202ENST00000356660 MYOM2P54296 1465 aa14.66□□□□□ -0.06
BDNF-202ENST00000356660 VPS37DQ86XT2 251 aa14.66□□□□□ -0.06
BDNF-202ENST00000356660 FAM227BQ96M60 508 aa14.66□□□□□ -0.06
BDNF-202ENST00000356660 RAD21O60216 631 aa14.66□□□□□ -0.06
BDNF-202ENST00000356660 NBPF7P0C2Y1 421 aaPredicted RBP14.66□□□□□ -0.06
BDNF-202ENST00000356660 AKAP17AQ02040 695 aaKnown RBP14.66□□□□□ -0.06
BDNF-202ENST00000356660 CFAP100Q494V2 611 aa14.66□□□□□ -0.06
BDNF-202ENST00000356660 ERC1Q8IUD2 1116 aa14.66□□□□□ -0.06
BDNF-202ENST00000356660 ZSWIM4Q9H7M6 989 aa14.66□□□□□ -0.06
BDNF-202ENST00000356660 ABCC1P33527 1531 aa14.66□□□□□ -0.06
BDNF-202ENST00000356660 IQGAP1P46940 1657 aa14.66□□□□□ -0.06
BDNF-202ENST00000356660 TATP17735 454 aaPredicted RBP14.65□□□□□ -0.06
BDNF-202ENST00000356660 NMIQ13287 307 aaPredicted RBP14.65□□□□□ -0.06
BDNF-202ENST00000356660 ARID5BQ14865 1188 aa14.65□□□□□ -0.06
BDNF-202ENST00000356660 HSP90AA4PQ58FG1 418 aa14.65□□□□□ -0.06
BDNF-202ENST00000356660 TOM1L2Q6ZVM7 507 aa14.65□□□□□ -0.06
BDNF-202ENST00000356660 RALYLQ86SE5 291 aaKnown RBP14.65□□□□□ -0.06
BDNF-202ENST00000356660 NPATQ14207 1427 aa14.65□□□□□ -0.06
BDNF-202ENST00000356660 ARHGAP29Q52LW3 1261 aa14.65□□□□□ -0.06
BDNF-202ENST00000356660 ANKLE2Q86XL3 938 aa14.65□□□□□ -0.06
BDNF-202ENST00000356660 LEO1Q8WVC0 666 aaPredicted RBP14.65□□□□□ -0.06
BDNF-202ENST00000356660 SPTLC3Q9NUV7 552 aa14.65□□□□□ -0.06
BDNF-202ENST00000356660 EVI5LQ96CN4 794 aa14.65□□□□□ -0.06
BDNF-202ENST00000356660 USP44Q9H0E7 712 aa14.65□□□□□ -0.06
BDNF-202ENST00000356660 IL25Q9H293 177 aa14.65□□□□□ -0.06
BDNF-202ENST00000356660 MAP3K4Q9Y6R4 1608 aa14.65□□□□□ -0.06
BDNF-202ENST00000356660 ATP7AQ04656 1500 aa14.65□□□□□ -0.06
BDNF-202ENST00000356660 CFAP74Q9C0B2 1584 aa14.64□□□□□ -0.07
BDNF-202ENST00000356660 G3V3G9 751 aa14.64□□□□□ -0.07
BDNF-202ENST00000356660 NEMFO60524 1076 aa14.64□□□□□ -0.07
BDNF-202ENST00000356660 JAK2O60674 1132 aa14.64□□□□□ -0.07
BDNF-202ENST00000356660 DCAF8Q5TAQ9 597 aa14.64□□□□□ -0.07
BDNF-202ENST00000356660 GABPB1Q06547 395 aaPredicted RBP14.64□□□□□ -0.07
BDNF-202ENST00000356660 GOLGA6L1Q8N7Z2 621 aa14.64□□□□□ -0.07
BDNF-202ENST00000356660 HYPKQ9NX55 129 aa14.64□□□□□ -0.07
BDNF-202ENST00000356660 RAB11FIP4Q86YS3 637 aa14.64□□□□□ -0.07
BDNF-202ENST00000356660 TPCN1Q9ULQ1 816 aa14.64□□□□□ -0.07
BDNF-202ENST00000356660 PIK3R4Q99570 1358 aa14.64□□□□□ -0.07
BDNF-202ENST00000356660 PRDM11Q9NQV5 511 aa14.63□□□□□ -0.07
BDNF-202ENST00000356660 CHPF2Q9P2E5 772 aa14.63□□□□□ -0.07
BDNF-202ENST00000356660 KIF24Q5T7B8 1368 aa14.63□□□□□ -0.07
BDNF-202ENST00000356660 FAM135BQ49AJ0 1406 aa14.63□□□□□ -0.07
BDNF-202ENST00000356660 POLR3DP05423 398 aaPredicted RBP14.63□□□□□ -0.07
BDNF-202ENST00000356660 CABP4P57796 275 aa14.63□□□□□ -0.07
BDNF-202ENST00000356660 ERCC6LQ2NKX8 1250 aa14.63□□□□□ -0.07
BDNF-202ENST00000356660 ABCA6Q8N139 1617 aa14.63□□□□□ -0.07
BDNF-202ENST00000356660 ACEP12821 1306 aa14.63□□□□□ -0.07
BDNF-202ENST00000356660 KIF2AO00139 706 aaPredicted RBP14.63□□□□□ -0.07
BDNF-202ENST00000356660 LMOD1P29536 600 aaPredicted RBP14.63□□□□□ -0.07
BDNF-202ENST00000356660 CHMP4CQ96CF2 233 aa14.63□□□□□ -0.07
BDNF-202ENST00000356660 LRRFIP1Q32MZ4 808 aaKnown RBP14.62□□□□□ -0.07
BDNF-202ENST00000356660 TRIM34Q9BYJ4 488 aa14.62□□□□□ -0.07
BDNF-202ENST00000356660 CLSTN2Q9H4D0 955 aa14.62□□□□□ -0.07
BDNF-202ENST00000356660 CEP152O94986 1710 aa14.62□□□□□ -0.07
BDNF-202ENST00000356660 FKBP4Q02790 459 aaKnown RBP eCLIP14.62□□□□□ -0.07
BDNF-202ENST00000356660 TRIM29Q14134 588 aa14.62□□□□□ -0.07
BDNF-202ENST00000356660 CCDC34Q96HJ3 373 aa14.62□□□□□ -0.07
BDNF-202ENST00000356660 LSG1Q9H089 658 aaKnown RBP14.62□□□□□ -0.07
BDNF-202ENST00000356660 AP5Z1O43299 807 aa14.62□□□□□ -0.07
BDNF-202ENST00000356660 NEK1Q96PY6 1258 aa14.62□□□□□ -0.07
BDNF-202ENST00000356660 RNF17Q9BXT8 1623 aaKnown RBP14.61□□□□□ -0.07
BDNF-202ENST00000356660 ERO1AQ96HE7 468 aa14.61□□□□□ -0.07
BDNF-202ENST00000356660 IFNKQ9P0W0 207 aa14.61□□□□□ -0.07
BDNF-202ENST00000356660 RRP12Q5JTH9 1297 aaKnown RBP14.61□□□□□ -0.07
BDNF-202ENST00000356660 Q6ZUG5 572 aa14.61□□□□□ -0.07
BDNF-202ENST00000356660 CTAGE5O15320 804 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms