RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 ME3Q16798 604 aa16.53■□□□□ 0.24
EBF3-201ENST00000355311 ZNF594Q96JF6 807 aaPredicted RBP16.53■□□□□ 0.24
EBF3-201ENST00000355311 USP25Q9UHP3 1055 aa16.53■□□□□ 0.24
EBF3-201ENST00000355311 A0A0G2JLW4 131 aa16.53■□□□□ 0.24
EBF3-201ENST00000355311 HSP90AB3PQ58FF7 597 aa16.53■□□□□ 0.24
EBF3-201ENST00000355311 ZBTB3Q9H5J0 574 aa16.53■□□□□ 0.24
EBF3-201ENST00000355311 RAD50Q92878 1312 aa16.53■□□□□ 0.24
EBF3-201ENST00000355311 TIMM10P62072 90 aa16.53■□□□□ 0.24
EBF3-201ENST00000355311 CBX1P83916 185 aa16.53■□□□□ 0.24
EBF3-201ENST00000355311 TFCP2Q12800 502 aa16.53■□□□□ 0.24
EBF3-201ENST00000355311 PDIA6Q15084 440 aa16.53■□□□□ 0.24
EBF3-201ENST00000355311 NOL7Q9UMY1 257 aaKnown RBP16.53■□□□□ 0.24
EBF3-201ENST00000355311 RGPD2P0DJD1 1756 aa16.53■□□□□ 0.24
EBF3-201ENST00000355311 STX6O43752 255 aa16.52■□□□□ 0.24
EBF3-201ENST00000355311 CUL4AQ13619 759 aa16.52■□□□□ 0.24
EBF3-201ENST00000355311 RAB11FIP4Q86YS3 637 aa16.52■□□□□ 0.24
EBF3-201ENST00000355311 FBXW7Q969H0 707 aa16.52■□□□□ 0.24
EBF3-201ENST00000355311 NWD1Q149M9 1564 aa16.52■□□□□ 0.24
EBF3-201ENST00000355311 CEMIPQ8WUJ3 1361 aa16.52■□□□□ 0.24
EBF3-201ENST00000355311 DNTTIP2Q5QJE6 756 aaKnown RBP16.52■□□□□ 0.23
EBF3-201ENST00000355311 STRN4Q9NRL3 753 aa16.52■□□□□ 0.23
EBF3-201ENST00000355311 LIMCH1Q9UPQ0 1083 aa16.52■□□□□ 0.23
EBF3-201ENST00000355311 RGPD1P0DJD0 1748 aa16.51■□□□□ 0.23
EBF3-201ENST00000355311 LRSAM1Q6UWE0 723 aa16.51■□□□□ 0.23
EBF3-201ENST00000355311 TPCN1Q9ULQ1 816 aa16.51■□□□□ 0.23
EBF3-201ENST00000355311 A0A087WZG4 1122 aa16.51■□□□□ 0.23
EBF3-201ENST00000355311 TTC5Q8N0Z6 440 aa16.51■□□□□ 0.23
EBF3-201ENST00000355311 A0A087WWV3 80 aa16.5■□□□□ 0.23
EBF3-201ENST00000355311 A1BGP04217 495 aa16.5■□□□□ 0.23
EBF3-201ENST00000355311 ZNF445P59923 1031 aa16.5■□□□□ 0.23
EBF3-201ENST00000355311 SNRKQ9NRH2 765 aa16.5■□□□□ 0.23
EBF3-201ENST00000355311 DBNDD2Q9BQY9 259 aa16.5■□□□□ 0.23
EBF3-201ENST00000355311 HYPKQ9NX55 129 aa16.5■□□□□ 0.23
EBF3-201ENST00000355311 NEXNQ0ZGT2 675 aa16.5■□□□□ 0.23
EBF3-201ENST00000355311 CREB3L3Q68CJ9 461 aa16.5■□□□□ 0.23
EBF3-201ENST00000355311 CLEC17AQ6ZS10 378 aa16.5■□□□□ 0.23
EBF3-201ENST00000355311 ANKRD13DQ6ZTN6 518 aa16.5■□□□□ 0.23
EBF3-201ENST00000355311 AMOTQ4VCS5 1084 aa16.49■□□□□ 0.23
EBF3-201ENST00000355311 SPC24Q8NBT2 197 aa16.49■□□□□ 0.23
EBF3-201ENST00000355311 CYP46A1Q9Y6A2 500 aa16.49■□□□□ 0.23
EBF3-201ENST00000355311 CYP27B1O15528 508 aa16.49■□□□□ 0.23
EBF3-201ENST00000355311 ST3GAL1Q11201 340 aa16.49■□□□□ 0.23
EBF3-201ENST00000355311 TTLL7Q6ZT98 887 aa16.49■□□□□ 0.23
EBF3-201ENST00000355311 CKAP2LQ8IYA6 745 aa16.49■□□□□ 0.23
EBF3-201ENST00000355311 LINS1Q8NG48 757 aa16.49■□□□□ 0.23
EBF3-201ENST00000355311 TTC14Q96N46 770 aa16.49■□□□□ 0.23
EBF3-201ENST00000355311 JAK2O60674 1132 aa16.48■□□□□ 0.23
EBF3-201ENST00000355311 FGD1P98174 961 aa16.48■□□□□ 0.23
EBF3-201ENST00000355311 TTC12Q9H892 705 aaPredicted RBP16.48■□□□□ 0.23
EBF3-201ENST00000355311 DDX21Q9NR30 783 aaKnown RBP eCLIP16.48■□□□□ 0.23
EBF3-201ENST00000355311 ZKSCAN5Q9Y2L8 839 aa16.48■□□□□ 0.23
EBF3-201ENST00000355311 NEURL1BA8MQ27 555 aa16.48■□□□□ 0.23
EBF3-201ENST00000355311 ZSCAN22P10073 491 aaPredicted RBP16.48■□□□□ 0.23
EBF3-201ENST00000355311 GUCY1B3Q02153 619 aa16.48■□□□□ 0.23
EBF3-201ENST00000355311 LARP1BQ659C4 914 aaKnown RBP16.48■□□□□ 0.23
EBF3-201ENST00000355311 LMBR1LQ6UX01 489 aa16.48■□□□□ 0.23
EBF3-201ENST00000355311 CDC37L1Q7L3B6 337 aa16.48■□□□□ 0.23
EBF3-201ENST00000355311 RPAP1Q9BWH6 1393 aaPredicted RBP16.48■□□□□ 0.23
EBF3-201ENST00000355311 WDR33Q9C0J8 1336 aaKnown RBP16.48■□□□□ 0.23
EBF3-201ENST00000355311 DDX58O95786 925 aaKnown RBP16.47■□□□□ 0.23
EBF3-201ENST00000355311 TATP17735 454 aaPredicted RBP16.47■□□□□ 0.23
EBF3-201ENST00000355311 TSPY26PQ9H489 355 aa16.47■□□□□ 0.23
EBF3-201ENST00000355311 TOPAZ1Q8N9V7 1692 aa16.47■□□□□ 0.23
EBF3-201ENST00000355311 HSP90B1P14625 803 aaKnown RBP16.47■□□□□ 0.23
EBF3-201ENST00000355311 ZKSCAN1P17029 563 aaPredicted RBP16.47■□□□□ 0.23
EBF3-201ENST00000355311 ATF3P18847 181 aa16.47■□□□□ 0.23
EBF3-201ENST00000355311 PTMSP20962 102 aa16.47■□□□□ 0.23
EBF3-201ENST00000355311 MCM2P49736 904 aa16.47■□□□□ 0.23
EBF3-201ENST00000355311 CABP4P57796 275 aa16.47■□□□□ 0.23
EBF3-201ENST00000355311 ANAPC15P60006 121 aa16.47■□□□□ 0.23
EBF3-201ENST00000355311 GCKRQ14397 625 aa16.47■□□□□ 0.23
EBF3-201ENST00000355311 DBNLQ9UJU6 430 aaKnown RBP16.47■□□□□ 0.23
EBF3-201ENST00000355311 SRCAPQ6ZRS2 3230 aa16.47■□□□□ 0.23
EBF3-201ENST00000355311 SYNE4Q8N205 404 aa16.47■□□□□ 0.23
EBF3-201ENST00000355311 GPATCH3Q96I76 525 aa16.47■□□□□ 0.23
EBF3-201ENST00000355311 ERBB3P21860 1342 aa16.46■□□□□ 0.23
EBF3-201ENST00000355311 FMN2Q9NZ56 1722 aa16.46■□□□□ 0.23
EBF3-201ENST00000355311 SPDYE4A6NLX3 237 aa16.46■□□□□ 0.23
EBF3-201ENST00000355311 ZNF500O60304 480 aaPredicted RBP16.46■□□□□ 0.23
EBF3-201ENST00000355311 HSP90AB4PQ58FF6 505 aa16.46■□□□□ 0.23
EBF3-201ENST00000355311 VPS53Q5VIR6 699 aa16.46■□□□□ 0.23
EBF3-201ENST00000355311 SLC52A2Q9HAB3 445 aa16.46■□□□□ 0.23
EBF3-201ENST00000355311 SLC27A2O14975 620 aa16.46■□□□□ 0.23
EBF3-201ENST00000355311 ERCC4Q92889 916 aaPredicted RBP16.46■□□□□ 0.23
EBF3-201ENST00000355311 CCDC171Q6TFL3 1326 aa16.45■□□□□ 0.22
EBF3-201ENST00000355311 CCT2P78371 535 aaKnown RBP16.45■□□□□ 0.22
EBF3-201ENST00000355311 F13A1P00488 732 aa16.45■□□□□ 0.22
EBF3-201ENST00000355311 PHKG2P15735 406 aa16.45■□□□□ 0.22
EBF3-201ENST00000355311 RUFY2Q8WXA3 655 aa16.45■□□□□ 0.22
EBF3-201ENST00000355311 GOLIM4O00461 696 aa16.44■□□□□ 0.22
EBF3-201ENST00000355311 ZSCAN20P17040 1043 aaPredicted RBP16.44■□□□□ 0.22
EBF3-201ENST00000355311 EVI5LQ96CN4 794 aa16.44■□□□□ 0.22
EBF3-201ENST00000355311 FTOQ9C0B1 505 aaKnown RBP eCLIP16.44■□□□□ 0.22
EBF3-201ENST00000355311 NPHP3Q7Z494 1330 aa16.44■□□□□ 0.22
EBF3-201ENST00000355311 NALCNQ8IZF0 1738 aa16.44■□□□□ 0.22
EBF3-201ENST00000355311 LARP1Q6PKG0 1096 aaKnown RBP16.44■□□□□ 0.22
EBF3-201ENST00000355311 PDLIM2Q96JY6 352 aa16.44■□□□□ 0.22
EBF3-201ENST00000355311 SMAP1Q8IYB5 467 aaPredicted RBP16.44■□□□□ 0.22
EBF3-201ENST00000355311 PUS3Q9BZE2 481 aaKnown RBP16.44■□□□□ 0.22
EBF3-201ENST00000355311 HAND2P61296 217 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms