RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.18□□□□□ -0.944e-6■■□□□ 13.7
HTT-201ENST00000355072 ADCY5O95622 1261 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 RAB3IPQ96QF0 476 aaPredicted RBP9.18□□□□□ -0.94
HTT-201ENST00000355072 ERBINQ96RT1 1412 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 ZNF692Q9BU19 519 aaPredicted RBP9.18□□□□□ -0.94
HTT-201ENST00000355072 TNIP1Q15025 636 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 TMTC2Q8N394 836 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 JADE2Q9NQC1 790 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 FOXD4L1Q9NU39 408 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 KIF4BQ2VIQ3 1234 aa9.17□□□□□ -0.94
HTT-201ENST00000355072 CAPZA3Q96KX2 299 aa9.17□□□□□ -0.94
HTT-201ENST00000355072 SEC63Q9UGP8 760 aaKnown RBP9.17□□□□□ -0.94
HTT-201ENST00000355072 SEPT2Q15019 361 aa9.17□□□□□ -0.94
HTT-201ENST00000355072 TTF1Q15361 905 aaPredicted RBP9.17□□□□□ -0.94
HTT-201ENST00000355072 PCF11O94913 1555 aaKnown RBP9.17□□□□□ -0.94
HTT-201ENST00000355072 BRD2P25440 801 aaKnown RBP9.17□□□□□ -0.94
HTT-201ENST00000355072 ATP6V1AP38606 617 aa9.17□□□□□ -0.94
HTT-201ENST00000355072 CFAP65Q6ZU64 1925 aaKnown RBP9.17□□□□□ -0.94
HTT-201ENST00000355072 CACNA2D4Q7Z3S7 1137 aa9.17□□□□□ -0.94
HTT-201ENST00000355072 NPHP3Q7Z494 1330 aa9.17□□□□□ -0.94
HTT-201ENST00000355072 GPR161Q8N6U8 529 aaKnown RBP9.17□□□□□ -0.94
HTT-201ENST00000355072 FEZ2Q9UHY8 353 aaPredicted RBP9.17□□□□□ -0.94
HTT-201ENST00000355072 ZHX1Q9UKY1 873 aaPredicted RBP9.17□□□□□ -0.94
HTT-201ENST00000355072 MACROD2A1Z1Q3 448 aa9.17□□□□□ -0.94
HTT-201ENST00000355072 PDE6BP35913 854 aa9.17□□□□□ -0.94
HTT-201ENST00000355072 AMOTQ4VCS5 1084 aa9.17□□□□□ -0.94
HTT-201ENST00000355072 CEP104O60308 925 aa9.17□□□□□ -0.94
HTT-201ENST00000355072 GTF2E1P29083 439 aaPredicted RBP9.17□□□□□ -0.94
HTT-201ENST00000355072 RBM10P98175 930 aaKnown RBP9.17□□□□□ -0.94
HTT-201ENST00000355072 DUSP27Q5VZP5 1158 aa9.17□□□□□ -0.94
HTT-201ENST00000355072 NGDNQ8NEJ9 315 aaKnown RBP9.17□□□□□ -0.94
HTT-201ENST00000355072 TNNC1P63316 161 aa9.16□□□□□ -0.94
HTT-201ENST00000355072 NCOA1Q15788 1441 aa9.16□□□□□ -0.94
HTT-201ENST00000355072 KCNH8Q96L42 1107 aa9.16□□□□□ -0.94
HTT-201ENST00000355072 EHMT1Q9H9B1 1298 aa9.16□□□□□ -0.94
HTT-201ENST00000355072 TMEM266Q2M3C6 531 aa9.16□□□□□ -0.94
HTT-201ENST00000355072 PPP4R3AQ6IN85 833 aa9.16□□□□□ -0.94
HTT-201ENST00000355072 OTUD6BQ8N6M0 293 aa9.16□□□□□ -0.94
HTT-201ENST00000355072 C9orf84Q5VXU9 1444 aa9.16□□□□□ -0.94
HTT-201ENST00000355072 ARHGAP45Q92619 1136 aa9.16□□□□□ -0.94
HTT-201ENST00000355072 ZNF165P49910 485 aa9.16□□□□□ -0.94
HTT-201ENST00000355072 TBC1D32Q96NH3 1257 aa9.16□□□□□ -0.94
HTT-201ENST00000355072 BCL2L13Q9BXK5 485 aa9.16□□□□□ -0.94
HTT-201ENST00000355072 MTRF1LQ9UGC7 380 aaKnown RBP9.16□□□□□ -0.94
HTT-201ENST00000355072 RLBP1P12271 317 aa9.16□□□□□ -0.94
HTT-201ENST00000355072 CASQ2O14958 399 aaPredicted RBP9.16□□□□□ -0.94
HTT-201ENST00000355072 AP1ARQ63HQ0 302 aa9.16□□□□□ -0.94
HTT-201ENST00000355072 TAF7Q15545 349 aaPredicted RBP9.16□□□□□ -0.94
HTT-201ENST00000355072 MSANTD4Q8NCY6 345 aa9.16□□□□□ -0.94
HTT-201ENST00000355072 JAKMIP1Q96N16 626 aaKnown RBP9.16□□□□□ -0.94
HTT-201ENST00000355072 LIMCH1Q9UPQ0 1083 aa9.16□□□□□ -0.94
HTT-201ENST00000355072 PEG3Q9GZU2 1588 aa9.15□□□□□ -0.94
HTT-201ENST00000355072 APAF1O14727 1248 aa9.15□□□□□ -0.94
HTT-201ENST00000355072 MAP7D1Q3KQU3 841 aa9.15□□□□□ -0.94
HTT-201ENST00000355072 FYB2Q5VWT5 728 aa9.15□□□□□ -0.94
HTT-201ENST00000355072 STK24Q9Y6E0 443 aa9.15□□□□□ -0.94
HTT-201ENST00000355072 TEX14Q8IWB6 1497 aa9.15□□□□□ -0.94
HTT-201ENST00000355072 AFAP1L2Q8N4X5 818 aa9.15□□□□□ -0.94
HTT-201ENST00000355072 NUP133Q8WUM0 1156 aa9.15□□□□□ -0.94
HTT-201ENST00000355072 MPHOSPH8Q99549 860 aa9.15□□□□□ -0.94
HTT-201ENST00000355072 TANGO6Q9C0B7 1094 aa9.15□□□□□ -0.94
HTT-201ENST00000355072 UHRF1BP1Q6BDS2 1440 aa9.15□□□□□ -0.94
HTT-201ENST00000355072 IQSEC3Q9UPP2 1182 aaPredicted RBP9.15□□□□□ -0.94
HTT-201ENST00000355072 ARHGAP31Q2M1Z3 1444 aa9.15□□□□□ -0.94
HTT-201ENST00000355072 NEBLO76041 1014 aa9.15□□□□□ -0.94
HTT-201ENST00000355072 MX1P20591 662 aa9.15□□□□□ -0.95
HTT-201ENST00000355072 NBPF9Q3BBW0 867 aa9.15□□□□□ -0.95
HTT-201ENST00000355072 FOXD4L5Q5VV16 416 aaPredicted RBP9.15□□□□□ -0.95
HTT-201ENST00000355072 FOXD4L4Q8WXT5 416 aaPredicted RBP9.15□□□□□ -0.95
HTT-201ENST00000355072 LNPKQ9C0E8 428 aa9.15□□□□□ -0.95
HTT-201ENST00000355072 APBA1Q02410 837 aa9.15□□□□□ -0.95
HTT-201ENST00000355072 CCDC129Q6ZRS4 1044 aa9.15□□□□□ -0.95
HTT-201ENST00000355072 GPATCH11Q8N954 259 aa9.15□□□□□ -0.95
HTT-201ENST00000355072 MMRN2Q9H8L6 949 aa9.15□□□□□ -0.95
HTT-201ENST00000355072 FANCD2Q9BXW9 1451 aa9.15□□□□□ -0.95
HTT-201ENST00000355072 ANKRD24Q8TF21 1146 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 BCCIPQ9P287 314 aaKnown RBP eCLIP9.14□□□□□ -0.95
HTT-201ENST00000355072 SHROOM2Q13796 1616 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 CSB-PGBD3P0DP91 1061 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 GMNNO75496 209 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 ANKRD36BQ8N2N9 1353 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 BRAPQ7Z569 592 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 CBX1P83916 185 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 RNASELQ05823 741 aaKnown RBP9.14□□□□□ -0.95
HTT-201ENST00000355072 NCAPGQ9BPX3 1015 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 NUCKS1Q9H1E3 243 aaKnown RBP9.14□□□□□ -0.95
HTT-201ENST00000355072 SMC1BQ8NDV3 1235 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 MYRIPQ8NFW9 859 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 A0A1W2PRG0 241 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 CERS3Q8IU89 383 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 KIF1BPQ96EK5 621 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 RUNDC3BQ96NL0 473 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 UBAC1Q9BSL1 405 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 PDRG1Q9NUG6 133 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 HLTFQ14527 1009 aaKnown RBP eCLIP9.14□□□□□ -0.95
HTT-201ENST00000355072 TBC1D5Q92609 795 aa9.14□□□□□ -0.95
HTT-201ENST00000355072 CLASP1Q7Z460 1538 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 STX6O43752 255 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 NOLC1Q14978 699 aaKnown RBP eCLIP9.13□□□□□ -0.95
HTT-201ENST00000355072 CCDC27Q2M243 656 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms