RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 TFIP11Q9UBB9 837 aaKnown RBP9.23□□□□□ -0.93
CD46-203ENST00000354848 FRMPD1Q5SYB0 1578 aa9.23□□□□□ -0.93
CD46-203ENST00000354848 MAP4K4O95819 1239 aaPredicted RBP9.23□□□□□ -0.93
CD46-203ENST00000354848 GNAI2P04899 355 aa9.23□□□□□ -0.93
CD46-203ENST00000354848 PSEN1P49768 467 aa9.23□□□□□ -0.93
CD46-203ENST00000354848 HAP1P54257 671 aaPredicted RBP9.23□□□□□ -0.93
CD46-203ENST00000354848 ME3Q16798 604 aa9.23□□□□□ -0.93
CD46-203ENST00000354848 GORABQ5T7V8 394 aa9.23□□□□□ -0.93
CD46-203ENST00000354848 LEO1Q8WVC0 666 aaPredicted RBP9.23□□□□□ -0.93
CD46-203ENST00000354848 ZSCAN31Q96LW9 406 aaPredicted RBP9.23□□□□□ -0.93
CD46-203ENST00000354848 YTHDC2Q9H6S0 1430 aaKnown RBP9.23□□□□□ -0.93
CD46-203ENST00000354848 SETD1AO15047 1707 aaKnown RBP9.23□□□□□ -0.93
CD46-203ENST00000354848 PNMA6EA0A0J9YXQ4 647 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 TBC1D8O95759 1140 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 SMC1AQ14683 1233 aaKnown RBP9.22□□□□□ -0.93
CD46-203ENST00000354848 VPS53Q5VIR6 699 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 NECAB1Q8N987 351 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 PDRG1Q9NUG6 133 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 F6X3S4 739 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 BICD2Q8TD16 824 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 PGBD1Q96JS3 809 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 SLC26A8Q96RN1 970 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 BRMS1Q9HCU9 246 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 ATP7AQ04656 1500 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 AOX1Q06278 1338 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 SLC4A2P04920 1241 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 GUCY2CP25092 1073 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 IL13P35225 146 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 GSDMDP57764 484 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 ADCK5Q3MIX3 580 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 GOLGA6L1Q8N7Z2 621 aa9.22□□□□□ -0.93
CD46-203ENST00000354848 PLEKHG2Q9H7P9 1386 aa9.21□□□□□ -0.93
CD46-203ENST00000354848 PSDA5PKW4 1024 aaPredicted RBP9.21□□□□□ -0.93
CD46-203ENST00000354848 BECN2A8MW95 431 aa9.21□□□□□ -0.93
CD46-203ENST00000354848 GNAI3P08754 354 aa9.21□□□□□ -0.93
CD46-203ENST00000354848 CCDC34Q96HJ3 373 aa9.21□□□□□ -0.93
CD46-203ENST00000354848 AK7Q96M32 723 aa9.21□□□□□ -0.93
CD46-203ENST00000354848 MYCBPQ99417 103 aaPredicted RBP9.21□□□□□ -0.93
CD46-203ENST00000354848 NCAPGQ9BPX3 1015 aa9.21□□□□□ -0.93
CD46-203ENST00000354848 SPG7Q9UQ90 795 aa9.21□□□□□ -0.93
CD46-203ENST00000354848 CHD2O14647 1828 aaKnown RBP9.21□□□□□ -0.93
CD46-203ENST00000354848 DHX40Q8IX18 779 aaKnown RBP9.21□□□□□ -0.94
CD46-203ENST00000354848 IQUBQ8NA54 791 aa9.21□□□□□ -0.94
CD46-203ENST00000354848 EXOC4Q96A65 974 aa9.21□□□□□ -0.94
CD46-203ENST00000354848 JAKMIP1Q96N16 626 aaKnown RBP9.21□□□□□ -0.94
CD46-203ENST00000354848 OSBPL5Q9H0X9 879 aaPredicted RBP9.21□□□□□ -0.94
CD46-203ENST00000354848 SLC52A1Q9NWF4 448 aa9.21□□□□□ -0.94
CD46-203ENST00000354848 RNF216Q9NWF9 866 aaPredicted RBP9.21□□□□□ -0.94
CD46-203ENST00000354848 PSD3Q9NYI0 1048 aa9.21□□□□□ -0.94
CD46-203ENST00000354848 ADAM21Q9UKJ8 722 aa9.21□□□□□ -0.94
CD46-203ENST00000354848 HDAC5Q9UQL6 1122 aa9.21□□□□□ -0.94
CD46-203ENST00000354848 JRKLQ9Y4A0 524 aa9.21□□□□□ -0.94
CD46-203ENST00000354848 TADA3O75528 432 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 LMAN1P49257 510 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 CCT4P50991 539 aaKnown RBP9.2□□□□□ -0.94
CD46-203ENST00000354848 CC2D1AQ6P1N0 951 aaPredicted RBP9.2□□□□□ -0.94
CD46-203ENST00000354848 HDGFL2Q7Z4V5 671 aaPredicted RBP9.2□□□□□ -0.94
CD46-203ENST00000354848 NBPF11Q86T75 865 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 IL1RAPL2Q9NP60 686 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 STAG3Q9UJ98 1225 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 A0A1B0GUL7 405 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 TUBB4AP04350 444 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 ACTN2P35609 894 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 STX1AQ16623 288 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 CCDC158Q5M9N0 1113 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 NUTM2DQ5VT03 806 aaPredicted RBP9.2□□□□□ -0.94
CD46-203ENST00000354848 G2E3Q7L622 706 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 PACS2Q86VP3 889 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 NUTM1Q86Y26 1132 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 MNS1Q8NEH6 495 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 ZSWIM6Q9HCJ5 1215 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 TOMM22Q9NS69 142 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 PPP6R1Q9UPN7 881 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 EMILIN1Q9Y6C2 1016 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 ADGRL3Q9HAR2 1447 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 EFCAB8A8MWE9 144 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 PDCP20941 246 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 ETF1P62495 437 aaKnown RBP9.2□□□□□ -0.94
CD46-203ENST00000354848 ATP8B2P98198 1209 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 CWC27Q6UX04 472 aaKnown RBP9.2□□□□□ -0.94
CD46-203ENST00000354848 EPC1Q9H2F5 836 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 DNAI1Q9UI46 699 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 TPCN1Q9ULQ1 816 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 CYP46A1Q9Y6A2 500 aa9.2□□□□□ -0.94
CD46-203ENST00000354848 HECW2Q9P2P5 1572 aa9.19□□□□□ -0.94
CD46-203ENST00000354848 CLTCQ00610 1675 aaKnown RBP9.19□□□□□ -0.94
CD46-203ENST00000354848 CHL1O00533 1208 aa9.19□□□□□ -0.94
CD46-203ENST00000354848 TSGA10IPQ3SY00 556 aa9.19□□□□□ -0.94
CD46-203ENST00000354848 TTC31Q49AM3 519 aaPredicted RBP9.19□□□□□ -0.94
CD46-203ENST00000354848 HOMER1Q86YM7 354 aa9.19□□□□□ -0.94
CD46-203ENST00000354848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.19□□□□□ -0.941e-6■■■□□ 18.3
CD46-203ENST00000354848 PI4K2BQ8TCG2 481 aa9.19□□□□□ -0.94
CD46-203ENST00000354848 IMPACTQ9P2X3 320 aa9.19□□□□□ -0.94
CD46-203ENST00000354848 RPGRIP1LQ68CZ1 1315 aa9.19□□□□□ -0.94
CD46-203ENST00000354848 PHLPP2Q6ZVD8 1323 aa9.19□□□□□ -0.94
CD46-203ENST00000354848 A0A087WWV3 80 aa9.19□□□□□ -0.94
CD46-203ENST00000354848 TPM1P09493 284 aa9.19□□□□□ -0.94
CD46-203ENST00000354848 NOM1Q5C9Z4 860 aaKnown RBP9.19□□□□□ -0.94
CD46-203ENST00000354848 ARMCX5Q6P1M9 558 aa9.19□□□□□ -0.94
CD46-203ENST00000354848 CARD6Q9BX69 1037 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 353.9 ms