RNA–Protein interactions for RNA: ENST00000354336.7

CRKL-201, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRKL, Length 5,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-201ENST00000354336 ESYT1Q9BSJ8 1104 aa20.59■□□□□ 0.89
CRKL-201ENST00000354336 TCP11L1Q9NUJ3 509 aa20.59■□□□□ 0.89
CRKL-201ENST00000354336 MFSD6Q6ZSS7 791 aa20.59■□□□□ 0.89
CRKL-201ENST00000354336 CCDC178Q5BJE1 867 aa20.59■□□□□ 0.89
CRKL-201ENST00000354336 SNX21Q969T3 373 aa20.59■□□□□ 0.89
CRKL-201ENST00000354336 SNRPA1P09661 255 aaKnown RBP20.58■□□□□ 0.89
CRKL-201ENST00000354336 CCDC144CPQ8IYA2 1237 aa20.58■□□□□ 0.89
CRKL-201ENST00000354336 CUL5Q93034 780 aa20.58■□□□□ 0.89
CRKL-201ENST00000354336 MRPL50Q8N5N7 158 aaKnown RBP20.58■□□□□ 0.89
CRKL-201ENST00000354336 CALML4Q96GE6 196 aa20.58■□□□□ 0.89
CRKL-201ENST00000354336 FANCAO15360 1455 aa20.58■□□□□ 0.89
CRKL-201ENST00000354336 PRIMPOLQ96LW4 560 aa20.58■□□□□ 0.89
CRKL-201ENST00000354336 GIMAP6Q6P9H5 292 aa20.58■□□□□ 0.88
CRKL-201ENST00000354336 DYDC1Q8WWB3 177 aa20.58■□□□□ 0.88
CRKL-201ENST00000354336 BRF1Q92994 677 aa20.58■□□□□ 0.88
CRKL-201ENST00000354336 ALS2CR12Q96Q35 445 aa20.57■□□□□ 0.88
CRKL-201ENST00000354336 NUP160Q12769 1436 aa20.57■□□□□ 0.88
CRKL-201ENST00000354336 PARD3Q8TEW0 1356 aa20.57■□□□□ 0.88
CRKL-201ENST00000354336 SLC26A6Q9BXS9 759 aa20.57■□□□□ 0.88
CRKL-201ENST00000354336 CDC5LQ99459 802 aaKnown RBP20.57■□□□□ 0.88
CRKL-201ENST00000354336 FAM114A1Q8IWE2 563 aa20.57■□□□□ 0.88
CRKL-201ENST00000354336 PAXBP1Q9Y5B6 917 aa20.57■□□□□ 0.88
CRKL-201ENST00000354336 ANKRD13DQ6ZTN6 518 aa20.56■□□□□ 0.88
CRKL-201ENST00000354336 NECAB1Q8N987 351 aa20.56■□□□□ 0.88
CRKL-201ENST00000354336 PANK2Q9BZ23 570 aa20.56■□□□□ 0.88
CRKL-201ENST00000354336 TMX1Q9H3N1 280 aa20.56■□□□□ 0.88
CRKL-201ENST00000354336 DENND4BO75064 1496 aaPredicted RBP20.56■□□□□ 0.88
CRKL-201ENST00000354336 GPATCH8Q9UKJ3 1502 aaKnown RBP20.56■□□□□ 0.88
CRKL-201ENST00000354336 KRT28Q7Z3Y7 464 aa20.56■□□□□ 0.88
CRKL-201ENST00000354336 UQCRFS1P1P0C7P4 283 aa20.56■□□□□ 0.88
CRKL-201ENST00000354336 PDE4BQ07343 736 aa20.56■□□□□ 0.88
CRKL-201ENST00000354336 PRDM10Q9NQV6 1147 aa20.56■□□□□ 0.88
CRKL-201ENST00000354336 DYNC1I1O14576 645 aa20.56■□□□□ 0.88
CRKL-201ENST00000354336 IFFO1Q0D2I5 559 aa20.56■□□□□ 0.88
CRKL-201ENST00000354336 CEP135Q66GS9 1140 aa20.56■□□□□ 0.88
CRKL-201ENST00000354336 ATP8B2P98198 1209 aa20.55■□□□□ 0.88
CRKL-201ENST00000354336 C8orf34Q49A92 452 aa20.55■□□□□ 0.88
CRKL-201ENST00000354336 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.55■□□□□ 0.88
CRKL-201ENST00000354336 MAPKBP1O60336 1514 aa20.55■□□□□ 0.88
CRKL-201ENST00000354336 UBA7P41226 1012 aa20.55■□□□□ 0.88
CRKL-201ENST00000354336 ANKRD24Q8TF21 1146 aa20.55■□□□□ 0.88
CRKL-201ENST00000354336 CCDC113Q9H0I3 377 aa20.55■□□□□ 0.88
CRKL-201ENST00000354336 THOC2Q8NI27 1593 aaKnown RBP20.55■□□□□ 0.88
CRKL-201ENST00000354336 ANXA1P04083 346 aa20.55■□□□□ 0.88
CRKL-201ENST00000354336 LDHCP07864 332 aa20.55■□□□□ 0.88
CRKL-201ENST00000354336 DNA2P51530 1060 aa20.55■□□□□ 0.88
CRKL-201ENST00000354336 DDX46Q7L014 1031 aaKnown RBP20.55■□□□□ 0.88
CRKL-201ENST00000354336 POLR3GO15318 223 aaPredicted RBP20.55■□□□□ 0.88
CRKL-201ENST00000354336 ZFYP08048 801 aaPredicted RBP20.55■□□□□ 0.88
CRKL-201ENST00000354336 PIP4K2BP78356 416 aa20.55■□□□□ 0.88
CRKL-201ENST00000354336 MAP2K1Q02750 393 aaPredicted RBP20.55■□□□□ 0.88
CRKL-201ENST00000354336 NAA15Q9BXJ9 866 aaKnown RBP20.55■□□□□ 0.88
CRKL-201ENST00000354336 CNPY2Q9Y2B0 182 aa20.55■□□□□ 0.88
CRKL-201ENST00000354336 KLF18A0A0U1RQI7 1052 aa20.54■□□□□ 0.88
CRKL-201ENST00000354336 KAT14Q9H8E8 782 aa20.54■□□□□ 0.88
CRKL-201ENST00000354336 CHPF2Q9P2E5 772 aa20.54■□□□□ 0.88
CRKL-201ENST00000354336 RBM8AQ9Y5S9 174 aaKnown RBP20.54■□□□□ 0.88
CRKL-201ENST00000354336 RAB11FIP4Q86YS3 637 aa20.54■□□□□ 0.88
CRKL-201ENST00000354336 CCDC171Q6TFL3 1326 aa20.54■□□□□ 0.88
CRKL-201ENST00000354336 KDM5BQ9UGL1 1544 aa20.54■□□□□ 0.88
CRKL-201ENST00000354336 ALDH1L1O75891 902 aa20.54■□□□□ 0.88
CRKL-201ENST00000354336 SYKP43405 635 aa20.54■□□□□ 0.88
CRKL-201ENST00000354336 POLR3AO14802 1390 aaPredicted RBP20.54■□□□□ 0.88
CRKL-201ENST00000354336 TSPY2A6NKD2 308 aa20.54■□□□□ 0.88
CRKL-201ENST00000354336 CCDC40Q4G0X9 1142 aa20.54■□□□□ 0.88
CRKL-201ENST00000354336 USP48Q86UV5 1035 aa20.54■□□□□ 0.88
CRKL-201ENST00000354336 RPGRQ92834 1020 aaKnown RBP20.54■□□□□ 0.88
CRKL-201ENST00000354336 INCENPQ9NQS7 918 aa20.54■□□□□ 0.88
CRKL-201ENST00000354336 TTC21AQ8NDW8 1320 aa20.54■□□□□ 0.88
CRKL-201ENST00000354336 EXOC5O00471 708 aa20.53■□□□□ 0.88
CRKL-201ENST00000354336 TRIM21P19474 475 aaKnown RBP20.53■□□□□ 0.88
CRKL-201ENST00000354336 ISM2Q6H9L7 571 aa20.53■□□□□ 0.88
CRKL-201ENST00000354336 PPP4R3AQ6IN85 833 aa20.53■□□□□ 0.88
CRKL-201ENST00000354336 EHMT1Q9H9B1 1298 aa20.53■□□□□ 0.88
CRKL-201ENST00000354336 IDEP14735 1019 aa20.53■□□□□ 0.88
CRKL-201ENST00000354336 PPFIA3O75145 1194 aa20.53■□□□□ 0.88
CRKL-201ENST00000354336 NEBLO76041 1014 aa20.53■□□□□ 0.88
CRKL-201ENST00000354336 CCDC91Q7Z6B0 441 aa20.53■□□□□ 0.88
CRKL-201ENST00000354336 KCNG4Q8TDN1 519 aa20.53■□□□□ 0.88
CRKL-201ENST00000354336 RBM25P49756 843 aaKnown RBP20.53■□□□□ 0.88
CRKL-201ENST00000354336 C8orf58Q8NAV2 365 aa20.53■□□□□ 0.88
CRKL-201ENST00000354336 FBLN1P23142 703 aa20.52■□□□□ 0.88
CRKL-201ENST00000354336 FAM200AQ8TCP9 573 aa20.52■□□□□ 0.88
CRKL-201ENST00000354336 PPP4R3BQ5MIZ7 849 aa20.52■□□□□ 0.88
CRKL-201ENST00000354336 CALCOCO1Q9P1Z2 691 aa20.52■□□□□ 0.88
CRKL-201ENST00000354336 BAG3O95817 575 aa20.52■□□□□ 0.88
CRKL-201ENST00000354336 GNG11P61952 73 aa20.51■□□□□ 0.87
CRKL-201ENST00000354336 CETN1Q12798 172 aa20.51■□□□□ 0.87
CRKL-201ENST00000354336 GSTTP1A0A1W2PQM5 241 aa20.51■□□□□ 0.87
CRKL-201ENST00000354336 SMARCC1Q92922 1105 aaPredicted RBP20.51■□□□□ 0.87
CRKL-201ENST00000354336 PRAG1Q86YV5 1406 aa20.51■□□□□ 0.87
CRKL-201ENST00000354336 ANO6Q4KMQ2 910 aa20.51■□□□□ 0.87
CRKL-201ENST00000354336 XRCC6P12956 609 aaKnown RBP eCLIP20.51■□□□□ 0.879e-23■■■□□ 17.3
CRKL-201ENST00000354336 JARID2Q92833 1246 aaPredicted RBP20.51■□□□□ 0.87
CRKL-201ENST00000354336 KRT23Q9C075 422 aa20.51■□□□□ 0.87
CRKL-201ENST00000354336 GOPCQ9HD26 462 aa20.51■□□□□ 0.87
CRKL-201ENST00000354336 RMND1Q9NWS8 449 aa20.51■□□□□ 0.87
CRKL-201ENST00000354336 BMP15O95972 392 aa20.51■□□□□ 0.87
CRKL-201ENST00000354336 F13A1P00488 732 aa20.51■□□□□ 0.87
CRKL-201ENST00000354336 WTAPQ15007 396 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms