RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 ZNF396Q96N95 335 aaPredicted RBP16.69■□□□□ 0.26
SPPL3-201ENST00000353487 EID1Q9Y6B2 187 aa16.69■□□□□ 0.26
SPPL3-201ENST00000353487 PREX2Q70Z35 1606 aa16.69■□□□□ 0.26
SPPL3-201ENST00000353487 ZMYM3Q14202 1370 aa16.69■□□□□ 0.26
SPPL3-201ENST00000353487 RPGRIP1LQ68CZ1 1315 aa16.69■□□□□ 0.26
SPPL3-201ENST00000353487 KIF2AO00139 706 aaPredicted RBP16.68■□□□□ 0.26
SPPL3-201ENST00000353487 NAA25Q14CX7 972 aa16.68■□□□□ 0.26
SPPL3-201ENST00000353487 CCAR1Q8IX12 1150 aaKnown RBP16.68■□□□□ 0.26
SPPL3-201ENST00000353487 ANKRD1Q15327 319 aa16.68■□□□□ 0.26
SPPL3-201ENST00000353487 POLKQ9UBT6 870 aa16.68■□□□□ 0.26
SPPL3-201ENST00000353487 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.68■□□□□ 0.26
SPPL3-201ENST00000353487 RAI14Q9P0K7 980 aa16.68■□□□□ 0.26
SPPL3-201ENST00000353487 CROCC2H7BZ55 1655 aa16.67■□□□□ 0.26
SPPL3-201ENST00000353487 GLRX3O76003 335 aaKnown RBP16.67■□□□□ 0.26
SPPL3-201ENST00000353487 SART3Q15020 963 aaKnown RBP16.67■□□□□ 0.26
SPPL3-201ENST00000353487 TAX1BP1Q86VP1 789 aa16.67■□□□□ 0.26
SPPL3-201ENST00000353487 CCDC171Q6TFL3 1326 aa16.67■□□□□ 0.26
SPPL3-201ENST00000353487 CPLX3Q8WVH0 158 aa16.67■□□□□ 0.26
SPPL3-201ENST00000353487 FBXO3Q9UK99 471 aa16.67■□□□□ 0.26
SPPL3-201ENST00000353487 TAF7Q15545 349 aaPredicted RBP16.67■□□□□ 0.26
SPPL3-201ENST00000353487 NEBLO76041 1014 aa16.66■□□□□ 0.26
SPPL3-201ENST00000353487 IVLP07476 585 aa16.66■□□□□ 0.26
SPPL3-201ENST00000353487 CASQ1P31415 396 aa16.66■□□□□ 0.26
SPPL3-201ENST00000353487 ERCC6LQ2NKX8 1250 aa16.66■□□□□ 0.26
SPPL3-201ENST00000353487 ATP10AO60312 1499 aa16.66■□□□□ 0.26
SPPL3-201ENST00000353487 MSH6P52701 1360 aa16.66■□□□□ 0.26
SPPL3-201ENST00000353487 A0A087WWV3 80 aa16.66■□□□□ 0.26
SPPL3-201ENST00000353487 RAB11FIP4Q86YS3 637 aa16.66■□□□□ 0.26
SPPL3-201ENST00000353487 ZSCAN25Q6NSZ9 544 aa16.66■□□□□ 0.26
SPPL3-201ENST00000353487 ZNF75DP51815 510 aa16.65■□□□□ 0.26
SPPL3-201ENST00000353487 PPP2R5AQ15172 486 aa16.65■□□□□ 0.26
SPPL3-201ENST00000353487 STX1AQ16623 288 aa16.65■□□□□ 0.26
SPPL3-201ENST00000353487 LMOD1P29536 600 aaPredicted RBP16.65■□□□□ 0.26
SPPL3-201ENST00000353487 WASHC4Q2M389 1173 aa16.65■□□□□ 0.26
SPPL3-201ENST00000353487 RHPN1Q8TCX5 695 aa16.65■□□□□ 0.26
SPPL3-201ENST00000353487 HNRNPH2P55795 449 aaKnown RBP16.65■□□□□ 0.26
SPPL3-201ENST00000353487 MAST1Q9Y2H9 1570 aa16.64■□□□□ 0.25
SPPL3-201ENST00000353487 NEMFO60524 1076 aa16.64■□□□□ 0.25
SPPL3-201ENST00000353487 POLR3DP05423 398 aaPredicted RBP16.64■□□□□ 0.25
SPPL3-201ENST00000353487 MYO5CQ9NQX4 1742 aa16.64■□□□□ 0.25
SPPL3-201ENST00000353487 NEXNQ0ZGT2 675 aa16.64■□□□□ 0.25
SPPL3-201ENST00000353487 ZNF710Q8N1W2 664 aa16.64■□□□□ 0.25
SPPL3-201ENST00000353487 PNMA6EA0A0J9YXQ4 647 aa16.64■□□□□ 0.25
SPPL3-201ENST00000353487 TRIM29Q14134 588 aa16.64■□□□□ 0.25
SPPL3-201ENST00000353487 RIC3Q7Z5B4 369 aa16.64■□□□□ 0.25
SPPL3-201ENST00000353487 SCLT1Q96NL6 688 aa16.64■□□□□ 0.25
SPPL3-201ENST00000353487 BRF1Q92994 677 aa16.63■□□□□ 0.25
SPPL3-201ENST00000353487 RBM8AQ9Y5S9 174 aaKnown RBP16.63■□□□□ 0.25
SPPL3-201ENST00000353487 SNX14Q9Y5W7 946 aa16.63■□□□□ 0.25
SPPL3-201ENST00000353487 PTPRCP08575 1304 aa16.63■□□□□ 0.25
SPPL3-201ENST00000353487 CPSF2Q9P2I0 782 aaKnown RBP16.63■□□□□ 0.25
SPPL3-201ENST00000353487 ANKRD36BQ8N2N9 1353 aa16.63■□□□□ 0.25
SPPL3-201ENST00000353487 MPHOSPH10O00566 681 aaKnown RBP16.63■□□□□ 0.25
SPPL3-201ENST00000353487 FOXO3O43524 673 aa16.63■□□□□ 0.25
SPPL3-201ENST00000353487 TOP1P11387 765 aaKnown RBP16.62■□□□□ 0.25
SPPL3-201ENST00000353487 DDIT3P35638 169 aa16.62■□□□□ 0.25
SPPL3-201ENST00000353487 NCBP1Q09161 790 aaKnown RBP16.62■□□□□ 0.25
SPPL3-201ENST00000353487 PPFIBP1Q86W92 1011 aa16.62■□□□□ 0.25
SPPL3-201ENST00000353487 UNC5CLQ8IV45 518 aa16.62■□□□□ 0.25
SPPL3-201ENST00000353487 CCDC12Q8WUD4 166 aaPredicted RBP16.62■□□□□ 0.25
SPPL3-201ENST00000353487 ERO1AQ96HE7 468 aa16.62■□□□□ 0.25
SPPL3-201ENST00000353487 DNA2P51530 1060 aa16.62■□□□□ 0.25
SPPL3-201ENST00000353487 NFXL1Q6ZNB6 911 aa16.62■□□□□ 0.25
SPPL3-201ENST00000353487 CDC37L1Q7L3B6 337 aa16.62■□□□□ 0.25
SPPL3-201ENST00000353487 PEX19P40855 299 aa16.62■□□□□ 0.25
SPPL3-201ENST00000353487 NLRP6P59044 892 aa16.62■□□□□ 0.25
SPPL3-201ENST00000353487 LARP1Q6PKG0 1096 aaKnown RBP16.62■□□□□ 0.25
SPPL3-201ENST00000353487 NPHP3Q7Z494 1330 aa16.61■□□□□ 0.25
SPPL3-201ENST00000353487 FRMD3A2A2Y4 597 aa16.61■□□□□ 0.25
SPPL3-201ENST00000353487 CPLX2Q6PUV4 134 aaKnown RBP16.61■□□□□ 0.25
SPPL3-201ENST00000353487 RALYLQ86SE5 291 aaKnown RBP16.61■□□□□ 0.25
SPPL3-201ENST00000353487 IFNKQ9P0W0 207 aa16.61■□□□□ 0.25
SPPL3-201ENST00000353487 MYCNP04198 464 aaPredicted RBP16.61■□□□□ 0.25
SPPL3-201ENST00000353487 SSR1P43307 286 aaKnown RBP16.61■□□□□ 0.25
SPPL3-201ENST00000353487 GSDMDP57764 484 aa16.61■□□□□ 0.25
SPPL3-201ENST00000353487 CACTINQ8WUQ7 758 aaKnown RBP16.61■□□□□ 0.25
SPPL3-201ENST00000353487 EBAG9O00559 213 aa16.6■□□□□ 0.25
SPPL3-201ENST00000353487 LRCH2Q5VUJ6 765 aa16.6■□□□□ 0.25
SPPL3-201ENST00000353487 RPAINQ86UA6 219 aa16.6■□□□□ 0.25
SPPL3-201ENST00000353487 GOLGA6L10A6NI86 522 aa16.6■□□□□ 0.25
SPPL3-201ENST00000353487 ARID5BQ14865 1188 aa16.6■□□□□ 0.25
SPPL3-201ENST00000353487 PUF60Q9UHX1 559 aaKnown RBP16.6■□□□□ 0.25
SPPL3-201ENST00000353487 HOOK1Q9UJC3 728 aaKnown RBP16.6■□□□□ 0.25
SPPL3-201ENST00000353487 A0A1W2PP64 1363 aa16.6■□□□□ 0.25
SPPL3-201ENST00000353487 ATP7AQ04656 1500 aa16.6■□□□□ 0.25
SPPL3-201ENST00000353487 OAS2P29728 719 aaKnown RBP16.6■□□□□ 0.25
SPPL3-201ENST00000353487 ATP6V1AP38606 617 aa16.6■□□□□ 0.25
SPPL3-201ENST00000353487 TTC6Q86TZ1 520 aa16.6■□□□□ 0.25
SPPL3-201ENST00000353487 ZCCHC11Q5TAX3 1644 aaKnown RBP16.6■□□□□ 0.25
SPPL3-201ENST00000353487 HIP1O00291 1037 aa16.6■□□□□ 0.25
SPPL3-201ENST00000353487 GOLGA6L7A0A1B0GV03 622 aa16.59■□□□□ 0.25
SPPL3-201ENST00000353487 ATP8B2P98198 1209 aa16.59■□□□□ 0.25
SPPL3-201ENST00000353487 HSP90AB2PQ58FF8 381 aa16.59■□□□□ 0.25
SPPL3-201ENST00000353487 ECHDC1Q9NTX5 307 aa16.59■□□□□ 0.25
SPPL3-201ENST00000353487 BCCIPQ9P287 314 aaKnown RBP eCLIP16.59■□□□□ 0.25
SPPL3-201ENST00000353487 PA2G4Q9UQ80 394 aaKnown RBP16.59■□□□□ 0.25
SPPL3-201ENST00000353487 RTEL1-TNFRSF6BF6WH68 1400 aa16.59■□□□□ 0.25
SPPL3-201ENST00000353487 ZEB2O60315 1214 aa16.59■□□□□ 0.25
SPPL3-201ENST00000353487 KIF4AO95239 1232 aa16.59■□□□□ 0.25
SPPL3-201ENST00000353487 SLC3A2P08195 630 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms