RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 CAMKK1Q8N5S9 505 aa7.05□□□□□ -1.28
RFC1-201ENST00000349703 ANKRD30AQ9BXX3 1397 aa7.05□□□□□ -1.28
RFC1-201ENST00000349703 DSG3P32926 999 aa7.05□□□□□ -1.28
RFC1-201ENST00000349703 CCDC173Q0VFZ6 552 aa7.05□□□□□ -1.28
RFC1-201ENST00000349703 CCDC181Q5TID7 509 aa7.05□□□□□ -1.28
RFC1-201ENST00000349703 YIPF4Q9BSR8 244 aa7.05□□□□□ -1.28
RFC1-201ENST00000349703 CHMP4BQ9H444 224 aaKnown RBP7.05□□□□□ -1.28
RFC1-201ENST00000349703 SEPT9Q9UHD8 586 aaPredicted RBP7.05□□□□□ -1.28
RFC1-201ENST00000349703 ESPNB1AK53 854 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 USP17L15C9J2P7 530 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 USP17L10C9JJH3 530 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 USP17L13C9JLJ4 530 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 USP17L12C9JPN9 530 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 USP17L11C9JVI0 530 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 USP17L21D6R901 530 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 USP17L18D6R9N7 530 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 USP17L22D6RA61 530 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 USP17L17D6RBQ6 530 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 USP17L19D6RCP7 530 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 USP17L20D6RJB6 530 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 USP17L24Q0WX57 530 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 NR1H3Q13133 447 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 TMEM164Q5U3C3 297 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 PGBD3Q8N328 593 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 USP33Q8TEY7 942 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 NOP56O00567 594 aaKnown RBP7.04□□□□□ -1.28
RFC1-201ENST00000349703 MAPK9P45984 424 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 HOMER1Q86YM7 354 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 TTC8Q8TAM2 541 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 CDK5RAP3Q96JB5 506 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 CDHR5Q9HBB8 845 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 CHAF1AQ13111 956 aaPredicted RBP7.04□□□□□ -1.28
RFC1-201ENST00000349703 CC2D1BQ5T0F9 858 aaKnown RBP7.04□□□□□ -1.28
RFC1-201ENST00000349703 COL4A3BPQ9Y5P4 624 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 SOX5P35711 763 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 SGIP1Q9BQI5 828 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 EHD4Q9H223 541 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 PCDHB3Q9Y5E6 796 aa7.04□□□□□ -1.28
RFC1-201ENST00000349703 PLEKHG3A1L390 1219 aa7.03□□□□□ -1.28
RFC1-201ENST00000349703 CDC37L1Q7L3B6 337 aa7.03□□□□□ -1.28
RFC1-201ENST00000349703 SMC4Q9NTJ3 1288 aa7.03□□□□□ -1.28
RFC1-201ENST00000349703 MYL3P08590 195 aa7.03□□□□□ -1.28
RFC1-201ENST00000349703 NFKB2Q00653 900 aa7.03□□□□□ -1.28
RFC1-201ENST00000349703 NOL9Q5SY16 702 aaKnown RBP7.03□□□□□ -1.28
RFC1-201ENST00000349703 TTLL7Q6ZT98 887 aa7.03□□□□□ -1.28
RFC1-201ENST00000349703 STK32AQ8WU08 396 aa7.03□□□□□ -1.28
RFC1-201ENST00000349703 XBP1P17861 261 aa7.03□□□□□ -1.28
RFC1-201ENST00000349703 NFX1Q12986 1120 aaKnown RBP7.03□□□□□ -1.28
RFC1-201ENST00000349703 PUS10Q3MIT2 529 aaKnown RBP7.03□□□□□ -1.28
RFC1-201ENST00000349703 SV2CQ496J9 727 aa7.03□□□□□ -1.28
RFC1-201ENST00000349703 FTSJ3Q8IY81 847 aaKnown RBP7.03□□□□□ -1.28
RFC1-201ENST00000349703 APPBP2Q92624 585 aa7.03□□□□□ -1.28
RFC1-201ENST00000349703 LRCH3Q96II8 777 aa7.03□□□□□ -1.28
RFC1-201ENST00000349703 WASF2Q9Y6W5 498 aa7.03□□□□□ -1.28
RFC1-201ENST00000349703 MYCLP1P12525 358 aaPredicted RBP7.02□□□□□ -1.28
RFC1-201ENST00000349703 DDX46Q7L014 1031 aaKnown RBP7.02□□□□□ -1.28
RFC1-201ENST00000349703 KRT25Q7Z3Z0 450 aa7.02□□□□□ -1.28
RFC1-201ENST00000349703 MAATS1Q7Z4T9 603 aa7.02□□□□□ -1.28
RFC1-201ENST00000349703 UBR7Q8N806 425 aa7.02□□□□□ -1.28
RFC1-201ENST00000349703 GRPEL1Q9HAV7 217 aa7.02□□□□□ -1.28
RFC1-201ENST00000349703 LRCH1Q9Y2L9 728 aa7.02□□□□□ -1.28
RFC1-201ENST00000349703 HCN4Q9Y3Q4 1203 aa7.02□□□□□ -1.28
RFC1-201ENST00000349703 TSPY4P0CV99 314 aa7.02□□□□□ -1.29
RFC1-201ENST00000349703 TSPY10P0CW01 314 aa7.02□□□□□ -1.29
RFC1-201ENST00000349703 PDE3AQ14432 1141 aa7.02□□□□□ -1.29
RFC1-201ENST00000349703 SMAP1Q8IYB5 467 aaPredicted RBP7.02□□□□□ -1.29
RFC1-201ENST00000349703 PTCD1O75127 700 aaKnown RBP7.02□□□□□ -1.29
RFC1-201ENST00000349703 MRPL50Q8N5N7 158 aaKnown RBP7.02□□□□□ -1.29
RFC1-201ENST00000349703 POGKQ9P215 609 aa7.02□□□□□ -1.29
RFC1-201ENST00000349703 IL2P60568 153 aa7.02□□□□□ -1.29
RFC1-201ENST00000349703 ZNF438Q7Z4V0 828 aa7.02□□□□□ -1.29
RFC1-201ENST00000349703 PRR12Q9ULL5 1215 aa7.02□□□□□ -1.29
RFC1-201ENST00000349703 NR1I2O75469 434 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 GGCXP38435 758 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 CABP4P57796 275 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 ESCO1Q5FWF5 840 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 VASH1Q7L8A9 365 aaPredicted RBP7.01□□□□□ -1.29
RFC1-201ENST00000349703 LCA5Q86VQ0 697 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 RPAP2Q8IXW5 612 aaPredicted RBP7.01□□□□□ -1.29
RFC1-201ENST00000349703 PLPP7Q8NBV4 271 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 GUCA2AQ02747 115 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 KIAA2012Q0VF49 1180 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 CC2D1AQ6P1N0 951 aaPredicted RBP7.01□□□□□ -1.29
RFC1-201ENST00000349703 PDCL2Q8N4E4 241 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 CHAC2Q8WUX2 184 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 RPGRQ92834 1020 aaKnown RBP7.01□□□□□ -1.29
RFC1-201ENST00000349703 OSBPL2Q9H1P3 480 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 DNAJC5Q9H3Z4 198 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 EFCC1Q9HA90 598 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 FAM217BQ9NTX9 383 aaPredicted RBP7.01□□□□□ -1.29
RFC1-201ENST00000349703 BTG4Q9NY30 223 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 FBXO2Q9UK22 296 aaPredicted RBP7.01□□□□□ -1.29
RFC1-201ENST00000349703 PNMA2Q9UL42 364 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 CENPJQ9HC77 1338 aaPredicted RBP7.01□□□□□ -1.29
RFC1-201ENST00000349703 RPRD2Q5VT52 1461 aaKnown RBP7.01□□□□□ -1.29
RFC1-201ENST00000349703 HECW1Q76N89 1606 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 OPA1O60313 960 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 QPCTQ16769 361 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 SDE2Q6IQ49 451 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 ARL10Q8N8L6 244 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 241.1 ms