RNA–Protein interactions for RNA: ENST00000341062.6

TRIM60-201, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM60, Length 1,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-201ENST00000341062 ZNF330Q9Y3S2 320 aaPredicted RBP16.43■□□□□ 0.22
TRIM60-201ENST00000341062 DDX11L8A8MPP1 907 aa16.42■□□□□ 0.22
TRIM60-201ENST00000341062 PLSCR1O15162 318 aa16.42■□□□□ 0.22
TRIM60-201ENST00000341062 RAB11FIP3O75154 756 aa16.42■□□□□ 0.22
TRIM60-201ENST00000341062 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
TRIM60-201ENST00000341062 DBF4Q9UBU7 674 aaPredicted RBP16.42■□□□□ 0.22
TRIM60-201ENST00000341062 ADCY9O60503 1353 aa16.42■□□□□ 0.22
TRIM60-201ENST00000341062 RAB3GAP1Q15042 981 aa16.42■□□□□ 0.22
TRIM60-201ENST00000341062 ZNF827Q17R98 1081 aa16.42■□□□□ 0.22
TRIM60-201ENST00000341062 UBR3Q6ZT12 1888 aa16.42■□□□□ 0.22
TRIM60-201ENST00000341062 XAGE3Q8WTP9 111 aa16.42■□□□□ 0.22
TRIM60-201ENST00000341062 UPF1Q92900 1129 aaKnown RBP eCLIP16.42■□□□□ 0.22
TRIM60-201ENST00000341062 ANO8Q9HCE9 1232 aaPredicted RBP16.41■□□□□ 0.22
TRIM60-201ENST00000341062 RGPD3A6NKT7 1758 aaPredicted RBP16.41■□□□□ 0.22
TRIM60-201ENST00000341062 RGPD4Q7Z3J3 1758 aa16.41■□□□□ 0.22
TRIM60-201ENST00000341062 NUP188Q5SRE5 1749 aa16.41■□□□□ 0.22
TRIM60-201ENST00000341062 PI4KAP2A4QPH2 592 aa16.4■□□□□ 0.22
TRIM60-201ENST00000341062 COPS6Q7L5N1 327 aa16.4■□□□□ 0.22
TRIM60-201ENST00000341062 PI4KAP1Q8N8J0 262 aa16.4■□□□□ 0.22
TRIM60-201ENST00000341062 CCDC87Q9NVE4 849 aa16.4■□□□□ 0.22
TRIM60-201ENST00000341062 STARD3NLO95772 234 aa16.39■□□□□ 0.22
TRIM60-201ENST00000341062 HSP90AA1P07900 732 aaKnown RBP16.39■□□□□ 0.21
TRIM60-201ENST00000341062 PPP1R42Q7Z4L9 355 aa16.39■□□□□ 0.21
TRIM60-201ENST00000341062 ARFGEF2Q9Y6D5 1785 aa16.38■□□□□ 0.21
TRIM60-201ENST00000341062 ALDH1L1O75891 902 aa16.38■□□□□ 0.21
TRIM60-201ENST00000341062 MTX1Q13505 466 aa16.38■□□□□ 0.21
TRIM60-201ENST00000341062 TNPO1Q92973 898 aaKnown RBP16.38■□□□□ 0.21
TRIM60-201ENST00000341062 C4AP0C0L4 1744 aa16.38■□□□□ 0.21
TRIM60-201ENST00000341062 GNPATO15228 680 aa16.37■□□□□ 0.21
TRIM60-201ENST00000341062 EPB41L2O43491 1005 aaKnown RBP16.37■□□□□ 0.21
TRIM60-201ENST00000341062 PHF14O94880 888 aa16.37■□□□□ 0.21
TRIM60-201ENST00000341062 EIF5P55010 431 aaKnown RBP16.37■□□□□ 0.21
TRIM60-201ENST00000341062 CLEC17AQ6ZS10 378 aa16.37■□□□□ 0.21
TRIM60-201ENST00000341062 GBP4Q96PP9 640 aa16.37■□□□□ 0.21
TRIM60-201ENST00000341062 TEX13AQ9BXU3 409 aaPredicted RBP16.37■□□□□ 0.21
TRIM60-201ENST00000341062 TBC1D2BQ9UPU7 963 aa16.37■□□□□ 0.21
TRIM60-201ENST00000341062 NBPF7P0C2Y1 421 aaPredicted RBP16.37■□□□□ 0.21
TRIM60-201ENST00000341062 PTMSP20962 102 aa16.37■□□□□ 0.21
TRIM60-201ENST00000341062 IL17RAQ96F46 866 aa16.37■□□□□ 0.21
TRIM60-201ENST00000341062 ESYT1Q9BSJ8 1104 aa16.37■□□□□ 0.21
TRIM60-201ENST00000341062 ZBTB3Q9H5J0 574 aa16.37■□□□□ 0.21
TRIM60-201ENST00000341062 HYPKQ9NX55 129 aa16.37■□□□□ 0.21
TRIM60-201ENST00000341062 CNTNAP4Q9C0A0 1308 aa16.37■□□□□ 0.21
TRIM60-201ENST00000341062 ST18O60284 1047 aa16.36■□□□□ 0.21
TRIM60-201ENST00000341062 HSP90AB4PQ58FF6 505 aa16.36■□□□□ 0.21
TRIM60-201ENST00000341062 SLC27A3Q5K4L6 730 aa16.36■□□□□ 0.21
TRIM60-201ENST00000341062 KSR2Q6VAB6 950 aa16.36■□□□□ 0.21
TRIM60-201ENST00000341062 HDAC5Q9UQL6 1122 aa16.36■□□□□ 0.21
TRIM60-201ENST00000341062 SRGAP3O43295 1099 aa16.35■□□□□ 0.21
TRIM60-201ENST00000341062 TRAK2O60296 914 aa16.35■□□□□ 0.21
TRIM60-201ENST00000341062 CHMLP26374 656 aa16.35■□□□□ 0.21
TRIM60-201ENST00000341062 HLFQ16534 295 aa16.35■□□□□ 0.21
TRIM60-201ENST00000341062 RHPN1Q8TCX5 695 aa16.35■□□□□ 0.21
TRIM60-201ENST00000341062 AKT1S1Q96B36 256 aa16.35■□□□□ 0.21
TRIM60-201ENST00000341062 KIF1BPQ96EK5 621 aa16.35■□□□□ 0.21
TRIM60-201ENST00000341062 ARXQ96QS3 562 aa16.35■□□□□ 0.21
TRIM60-201ENST00000341062 PDGFDQ9GZP0 370 aaPredicted RBP16.35■□□□□ 0.21
TRIM60-201ENST00000341062 SRP68Q9UHB9 627 aaKnown RBP16.35■□□□□ 0.21
TRIM60-201ENST00000341062 NUP98P52948 1817 aa16.35■□□□□ 0.21
TRIM60-201ENST00000341062 SURF6O75683 361 aaKnown RBP16.35■□□□□ 0.21
TRIM60-201ENST00000341062 IL27Q8NEV9 243 aa16.35■□□□□ 0.21
TRIM60-201ENST00000341062 COL15A1P39059 1388 aa16.34■□□□□ 0.21
TRIM60-201ENST00000341062 BAG6P46379 1132 aa16.34■□□□□ 0.21
TRIM60-201ENST00000341062 ANAPC15P60006 121 aa16.34■□□□□ 0.21
TRIM60-201ENST00000341062 L1TD1Q5T7N2 865 aaKnown RBP16.34■□□□□ 0.21
TRIM60-201ENST00000341062 TSHZ3Q63HK5 1081 aa16.34■□□□□ 0.21
TRIM60-201ENST00000341062 MAP3K2Q9Y2U5 619 aa16.34■□□□□ 0.21
TRIM60-201ENST00000341062 ERBB4Q15303 1308 aa16.34■□□□□ 0.21
TRIM60-201ENST00000341062 USP42Q9H9J4 1324 aaKnown RBP16.34■□□□□ 0.21
TRIM60-201ENST00000341062 IL6STP40189 918 aaPredicted RBP16.33■□□□□ 0.21
TRIM60-201ENST00000341062 SF3B2Q13435 895 aaKnown RBP16.33■□□□□ 0.21
TRIM60-201ENST00000341062 RPS6KA4O75676 772 aa16.33■□□□□ 0.2
TRIM60-201ENST00000341062 RC3H1Q5TC82 1133 aaKnown RBP16.33■□□□□ 0.2
TRIM60-201ENST00000341062 ARHGEF1Q92888 912 aaKnown RBP16.33■□□□□ 0.2
TRIM60-201ENST00000341062 CWC22Q9HCG8 908 aaKnown RBP16.33■□□□□ 0.2
TRIM60-201ENST00000341062 UTYO14607 1347 aa16.33■□□□□ 0.2
TRIM60-201ENST00000341062 BCORQ6W2J9 1755 aa16.32■□□□□ 0.2
TRIM60-201ENST00000341062 FSD2A1L4K1 749 aa16.32■□□□□ 0.2
TRIM60-201ENST00000341062 LINS1Q8NG48 757 aa16.32■□□□□ 0.2
TRIM60-201ENST00000341062 PI4K2BQ8TCG2 481 aa16.32■□□□□ 0.2
TRIM60-201ENST00000341062 AK7Q96M32 723 aa16.32■□□□□ 0.2
TRIM60-201ENST00000341062 BCL2L12Q9HB09 334 aa16.32■□□□□ 0.2
TRIM60-201ENST00000341062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.31■□□□□ 0.2
TRIM60-201ENST00000341062 TRIM6-TRIM34B2RNG4 842 aa16.31■□□□□ 0.2
TRIM60-201ENST00000341062 ATP5J2-PTCD1G3V325 749 aa16.31■□□□□ 0.2
TRIM60-201ENST00000341062 DDX58O95786 925 aaKnown RBP16.31■□□□□ 0.2
TRIM60-201ENST00000341062 MCCP23508 829 aa16.31■□□□□ 0.2
TRIM60-201ENST00000341062 CWF19L2Q2TBE0 894 aaKnown RBP16.31■□□□□ 0.2
TRIM60-201ENST00000341062 SKOR2Q2VWA4 1001 aaPredicted RBP16.31■□□□□ 0.2
TRIM60-201ENST00000341062 ANKRD13DQ6ZTN6 518 aa16.31■□□□□ 0.2
TRIM60-201ENST00000341062 DZIP3Q86Y13 1208 aaKnown RBP16.31■□□□□ 0.2
TRIM60-201ENST00000341062 IL1RAPL2Q9NP60 686 aa16.31■□□□□ 0.2
TRIM60-201ENST00000341062 AFDNP55196 1824 aaKnown RBP16.31■□□□□ 0.2
TRIM60-201ENST00000341062 UTRNP46939 3433 aa16.31■□□□□ 0.2
TRIM60-201ENST00000341062 CAMTA2O94983 1202 aa16.31■□□□□ 0.2
TRIM60-201ENST00000341062 IGKV5-2P06315 115 aa16.31■□□□□ 0.2
TRIM60-201ENST00000341062 MCM2P49736 904 aa16.31■□□□□ 0.2
TRIM60-201ENST00000341062 NUCB2P80303 420 aa16.31■□□□□ 0.2
TRIM60-201ENST00000341062 JARID2Q92833 1246 aaPredicted RBP16.31■□□□□ 0.2
TRIM60-201ENST00000341062 CYP2E1P05181 493 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms