RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 TARBP1Q13395 1621 aaKnown RBP22.52■■□□□ 1.2
CDK13-202ENST00000340829 EDC4Q6P2E9 1401 aaKnown RBP22.52■■□□□ 1.2
CDK13-202ENST00000340829 TTF1Q15361 905 aaPredicted RBP22.52■■□□□ 1.19
CDK13-202ENST00000340829 NMIQ13287 307 aaPredicted RBP22.51■■□□□ 1.19
CDK13-202ENST00000340829 NPHP3Q7Z494 1330 aa22.51■■□□□ 1.19
CDK13-202ENST00000340829 GIMAP6Q6P9H5 292 aa22.51■■□□□ 1.19
CDK13-202ENST00000340829 ZGPATQ8N5A5 531 aaKnown RBP22.51■■□□□ 1.19
CDK13-202ENST00000340829 RNF41Q9H4P4 317 aaPredicted RBP22.51■■□□□ 1.19
CDK13-202ENST00000340829 BIN1O00499 593 aa22.51■■□□□ 1.19
CDK13-202ENST00000340829 ADCY5O95622 1261 aa22.51■■□□□ 1.19
CDK13-202ENST00000340829 XRCC6P12956 609 aaKnown RBP eCLIP22.51■■□□□ 1.19
CDK13-202ENST00000340829 HCLS1P14317 486 aaPredicted RBP22.51■■□□□ 1.19
CDK13-202ENST00000340829 MBD5Q9P267 1494 aa22.51■■□□□ 1.19
CDK13-202ENST00000340829 SOS1Q07889 1333 aaPredicted RBP22.51■■□□□ 1.19
CDK13-202ENST00000340829 CTAGE5O15320 804 aa22.51■■□□□ 1.19
CDK13-202ENST00000340829 TMEM67Q5HYA8 995 aa22.51■■□□□ 1.19
CDK13-202ENST00000340829 TRPM2O94759 1503 aa22.5■■□□□ 1.19
CDK13-202ENST00000340829 ERCC4Q92889 916 aaPredicted RBP22.5■■□□□ 1.19
CDK13-202ENST00000340829 PANK2Q9BZ23 570 aa22.5■■□□□ 1.19
CDK13-202ENST00000340829 NCOA7Q8NI08 942 aa22.5■■□□□ 1.19
CDK13-202ENST00000340829 IARSP41252 1262 aaKnown RBP22.5■■□□□ 1.19
CDK13-202ENST00000340829 USP48Q86UV5 1035 aa22.49■■□□□ 1.19
CDK13-202ENST00000340829 CHMLP26374 656 aa22.49■■□□□ 1.19
CDK13-202ENST00000340829 USP26Q9BXU7 913 aa22.49■■□□□ 1.19
CDK13-202ENST00000340829 IP6K1Q92551 441 aa22.49■■□□□ 1.19
CDK13-202ENST00000340829 PPP1R1BQ9UD71 204 aaPredicted RBP22.49■■□□□ 1.19
CDK13-202ENST00000340829 ZFYVE27Q5T4F4 411 aa22.49■■□□□ 1.19
CDK13-202ENST00000340829 LRSAM1Q6UWE0 723 aa22.49■■□□□ 1.19
CDK13-202ENST00000340829 TBX22Q9Y458 520 aa22.49■■□□□ 1.19
CDK13-202ENST00000340829 RAB3GAP1Q15042 981 aa22.48■■□□□ 1.19
CDK13-202ENST00000340829 TTC41PQ6P2S7 1318 aa22.48■■□□□ 1.19
CDK13-202ENST00000340829 MCMDC2Q4G0Z9 681 aa22.48■■□□□ 1.19
CDK13-202ENST00000340829 CNNM3Q8NE01 707 aa22.48■■□□□ 1.19
CDK13-202ENST00000340829 INSRP06213 1382 aa22.48■■□□□ 1.19
CDK13-202ENST00000340829 METAP2P50579 478 aaKnown RBP eCLIP22.48■■□□□ 1.19
CDK13-202ENST00000340829 CFAP65Q6ZU64 1925 aaKnown RBP22.47■■□□□ 1.19
CDK13-202ENST00000340829 CHL1O00533 1208 aa22.47■■□□□ 1.19
CDK13-202ENST00000340829 ZNF165P49910 485 aa22.47■■□□□ 1.19
CDK13-202ENST00000340829 BMP2KQ9NSY1 1161 aaPredicted RBP22.47■■□□□ 1.19
CDK13-202ENST00000340829 ARHGEF5Q12774 1597 aa22.47■■□□□ 1.19
CDK13-202ENST00000340829 RNMTO43148 476 aaKnown RBP22.47■■□□□ 1.19
CDK13-202ENST00000340829 ODF2Q5BJF6 829 aa22.47■■□□□ 1.19
CDK13-202ENST00000340829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.47■■□□□ 1.198e-7■■■■■ 27.3
CDK13-202ENST00000340829 KLF18A0A0U1RQI7 1052 aa22.47■■□□□ 1.19
CDK13-202ENST00000340829 MPHOSPH10O00566 681 aaKnown RBP22.47■■□□□ 1.19
CDK13-202ENST00000340829 SETQ01105 290 aaPredicted RBP22.47■■□□□ 1.19
CDK13-202ENST00000340829 PTPN14Q15678 1187 aa22.47■■□□□ 1.19
CDK13-202ENST00000340829 ATP2B3Q16720 1220 aa22.47■■□□□ 1.19
CDK13-202ENST00000340829 ZNF287Q9HBT7 754 aa22.47■■□□□ 1.19
CDK13-202ENST00000340829 MCM5P33992 734 aa22.46■■□□□ 1.19
CDK13-202ENST00000340829 AK2P54819 239 aa22.46■■□□□ 1.19
CDK13-202ENST00000340829 NOM1Q5C9Z4 860 aaKnown RBP22.46■■□□□ 1.19
CDK13-202ENST00000340829 IL15P40933 162 aaPredicted RBP22.46■■□□□ 1.19
CDK13-202ENST00000340829 EIF5P55010 431 aaKnown RBP22.46■■□□□ 1.19
CDK13-202ENST00000340829 CDC5LQ99459 802 aaKnown RBP22.46■■□□□ 1.19
CDK13-202ENST00000340829 MAGI2Q86UL8 1455 aa22.45■■□□□ 1.18
CDK13-202ENST00000340829 Q6ZUG5 572 aa22.45■■□□□ 1.18
CDK13-202ENST00000340829 EPB41L2O43491 1005 aaKnown RBP22.45■■□□□ 1.18
CDK13-202ENST00000340829 MFSD6Q6ZSS7 791 aa22.45■■□□□ 1.18
CDK13-202ENST00000340829 NGLY1Q96IV0 654 aa22.45■■□□□ 1.18
CDK13-202ENST00000340829 SEC63Q9UGP8 760 aaKnown RBP22.45■■□□□ 1.18
CDK13-202ENST00000340829 CATIPQ7Z7H3 387 aa22.45■■□□□ 1.18
CDK13-202ENST00000340829 PRM3Q9NNZ6 103 aa22.45■■□□□ 1.18
CDK13-202ENST00000340829 DNM1Q05193 864 aaKnown RBP22.45■■□□□ 1.18
CDK13-202ENST00000340829 ZNF444Q8N0Y2 327 aaPredicted RBP22.44■■□□□ 1.18
CDK13-202ENST00000340829 STX1AQ16623 288 aa22.44■■□□□ 1.18
CDK13-202ENST00000340829 SLC26A6Q9BXS9 759 aa22.44■■□□□ 1.18
CDK13-202ENST00000340829 BICC1Q9H694 974 aaKnown RBP22.44■■□□□ 1.18
CDK13-202ENST00000340829 SBNO1A3KN83 1393 aa22.44■■□□□ 1.18
CDK13-202ENST00000340829 F13A1P00488 732 aa22.44■■□□□ 1.18
CDK13-202ENST00000340829 ISM2Q6H9L7 571 aa22.44■■□□□ 1.18
CDK13-202ENST00000340829 ZSCAN16Q9H4T2 348 aaPredicted RBP22.44■■□□□ 1.18
CDK13-202ENST00000340829 ARHGAP29Q52LW3 1261 aa22.44■■□□□ 1.18
CDK13-202ENST00000340829 NLRP5P59047 1200 aa22.43■■□□□ 1.18
CDK13-202ENST00000340829 TOP1P11387 765 aaKnown RBP22.43■■□□□ 1.18
CDK13-202ENST00000340829 CDR1P51861 262 aa22.43■■□□□ 1.18
CDK13-202ENST00000340829 C19orf44Q9H6X5 657 aa22.43■■□□□ 1.18
CDK13-202ENST00000340829 SKIDA1Q1XH10 827 aa22.43■■□□□ 1.18
CDK13-202ENST00000340829 ATP10AO60312 1499 aa22.43■■□□□ 1.18
CDK13-202ENST00000340829 UQCRFS1P1P0C7P4 283 aa22.42■■□□□ 1.18
CDK13-202ENST00000340829 TFCP2Q12800 502 aa22.42■■□□□ 1.18
CDK13-202ENST00000340829 PAG1Q9NWQ8 432 aa22.42■■□□□ 1.18
CDK13-202ENST00000340829 IQSEC3Q9UPP2 1182 aaPredicted RBP22.42■■□□□ 1.18
CDK13-202ENST00000340829 SLC4A8Q2Y0W8 1093 aa22.42■■□□□ 1.18
CDK13-202ENST00000340829 TRMT1Q9NXH9 659 aaKnown RBP22.42■■□□□ 1.18
CDK13-202ENST00000340829 ZFYP08048 801 aaPredicted RBP22.42■■□□□ 1.18
CDK13-202ENST00000340829 PHF23Q9BUL5 403 aaPredicted RBP22.42■■□□□ 1.18
CDK13-202ENST00000340829 C16orf45Q96MC5 204 aaPredicted RBP22.41■■□□□ 1.18
CDK13-202ENST00000340829 LUC7LQ9NQ29 371 aaKnown RBP22.41■■□□□ 1.18
CDK13-202ENST00000340829 SYCP1Q15431 976 aa22.41■■□□□ 1.18
CDK13-202ENST00000340829 CREB3L3Q68CJ9 461 aa22.41■■□□□ 1.18
CDK13-202ENST00000340829 ZNF76P36508 570 aa22.41■■□□□ 1.18
CDK13-202ENST00000340829 RBM25P49756 843 aaKnown RBP22.41■■□□□ 1.18
CDK13-202ENST00000340829 CCDC181Q5TID7 509 aa22.41■■□□□ 1.18
CDK13-202ENST00000340829 PATL2C9JE40 543 aaKnown RBP22.41■■□□□ 1.18
CDK13-202ENST00000340829 LGR6Q9HBX8 967 aa22.4■■□□□ 1.18
CDK13-202ENST00000340829 CPA1P15085 419 aa22.4■■□□□ 1.18
CDK13-202ENST00000340829 PDCL2Q8N4E4 241 aa22.4■■□□□ 1.18
CDK13-202ENST00000340829 ACSBG1Q96GR2 724 aa22.4■■□□□ 1.18
CDK13-202ENST00000340829 DCAF5Q96JK2 942 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms