RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CUL5Q93034 780 aa15.18■□□□□ 0.02
LIN54-201ENST00000340417 PPIP5K2O43314 1243 aa15.18■□□□□ 0.02
LIN54-201ENST00000340417 TXLNAP40222 546 aa15.18■□□□□ 0.02
LIN54-201ENST00000340417 CLTCQ00610 1675 aaKnown RBP15.18■□□□□ 0.02
LIN54-201ENST00000340417 TSR1Q2NL82 804 aaKnown RBP15.18■□□□□ 0.02
LIN54-201ENST00000340417 NAA16Q6N069 864 aaPredicted RBP15.18■□□□□ 0.02
LIN54-201ENST00000340417 PTPRTO14522 1441 aa15.18■□□□□ 0.02
LIN54-201ENST00000340417 KRT32Q14532 448 aa15.18■□□□□ 0.02
LIN54-201ENST00000340417 ECM2O94769 699 aaPredicted RBP15.18■□□□□ 0.02
LIN54-201ENST00000340417 NEK4P51957 841 aa15.18■□□□□ 0.02
LIN54-201ENST00000340417 BLOC1S2Q6QNY1 142 aa15.18■□□□□ 0.02
LIN54-201ENST00000340417 GZF1Q9H116 711 aaPredicted RBP15.18■□□□□ 0.02
LIN54-201ENST00000340417 CDKL5O76039 1030 aa15.18■□□□□ 0.02
LIN54-201ENST00000340417 KDM4FA0A1W2PPD8 638 aa15.17■□□□□ 0.02
LIN54-201ENST00000340417 MPHOSPH6Q99547 160 aaKnown RBP15.17■□□□□ 0.02
LIN54-201ENST00000340417 BIN2Q9UBW5 565 aaPredicted RBP15.17■□□□□ 0.02
LIN54-201ENST00000340417 ANKRD20A12PQ8NF67 263 aa15.17■□□□□ 0.02
LIN54-201ENST00000340417 ZNF496Q96IT1 587 aaPredicted RBP15.17■□□□□ 0.02
LIN54-201ENST00000340417 TET3O43151 1660 aa15.17■□□□□ 0.02
LIN54-201ENST00000340417 ZNF213O14771 459 aa15.17■□□□□ 0.02
LIN54-201ENST00000340417 PDE8AO60658 829 aa15.17■□□□□ 0.02
LIN54-201ENST00000340417 TRIM27P14373 513 aa15.17■□□□□ 0.02
LIN54-201ENST00000340417 ZNF526Q8TF50 670 aaPredicted RBP15.17■□□□□ 0.02
LIN54-201ENST00000340417 JAG2Q9Y219 1238 aa15.17■□□□□ 0.02
LIN54-201ENST00000340417 H7C1D1 291 aa15.16■□□□□ 0.02
LIN54-201ENST00000340417 MPNDQ8N594 471 aa15.16■□□□□ 0.02
LIN54-201ENST00000340417 INSRP06213 1382 aa15.16■□□□□ 0.02
LIN54-201ENST00000340417 BABAM1Q9NWV8 329 aa15.16■□□□□ 0.02
LIN54-201ENST00000340417 CAMSAP1Q5T5Y3 1602 aa15.16■□□□□ 0.02
LIN54-201ENST00000340417 ANKARQ7Z5J8 1434 aa15.16■□□□□ 0.02
LIN54-201ENST00000340417 CNKSR1Q969H4 720 aa15.16■□□□□ 0.02
LIN54-201ENST00000340417 SCLT1Q96NL6 688 aa15.16■□□□□ 0.02
LIN54-201ENST00000340417 KRT24Q2M2I5 525 aa15.16■□□□□ 0.02
LIN54-201ENST00000340417 TSPY2A6NKD2 308 aa15.15■□□□□ 0.02
LIN54-201ENST00000340417 LDHBP07195 334 aaKnown RBP15.15■□□□□ 0.02
LIN54-201ENST00000340417 CTCFLQ8NI51 663 aaPredicted RBP15.15■□□□□ 0.02
LIN54-201ENST00000340417 USP6P35125 1406 aa15.15■□□□□ 0.02
LIN54-201ENST00000340417 USPL1Q5W0Q7 1092 aa15.15■□□□□ 0.02
LIN54-201ENST00000340417 GLI2P10070 1586 aa15.15■□□□□ 0.02
LIN54-201ENST00000340417 ECHDC1Q9NTX5 307 aa15.15■□□□□ 0.02
LIN54-201ENST00000340417 PLCG2P16885 1265 aa15.14■□□□□ 0.01
LIN54-201ENST00000340417 EHMT1Q9H9B1 1298 aa15.14■□□□□ 0.01
LIN54-201ENST00000340417 SOS1Q07889 1333 aaPredicted RBP15.14■□□□□ 0.01
LIN54-201ENST00000340417 CCDC73Q6ZRK6 1079 aa15.14■□□□□ 0.01
LIN54-201ENST00000340417 CCDC191Q8NCU4 936 aa15.14■□□□□ 0.01
LIN54-201ENST00000340417 NOL7Q9UMY1 257 aaKnown RBP15.14■□□□□ 0.01
LIN54-201ENST00000340417 MYOM2P54296 1465 aa15.14■□□□□ 0.01
LIN54-201ENST00000340417 BECN2A8MW95 431 aa15.14■□□□□ 0.01
LIN54-201ENST00000340417 CRKLP46109 303 aaKnown RBP15.14■□□□□ 0.01
LIN54-201ENST00000340417 JAKMIP1Q96N16 626 aaKnown RBP15.14■□□□□ 0.01
LIN54-201ENST00000340417 PHAXQ9H814 394 aaKnown RBP15.14■□□□□ 0.01
LIN54-201ENST00000340417 PRR36Q9H6K5 1346 aa15.14■□□□□ 0.01
LIN54-201ENST00000340417 KCNQ4P56696 695 aa15.14■□□□□ 0.01
LIN54-201ENST00000340417 VTI1AQ96AJ9 217 aa15.14■□□□□ 0.01
LIN54-201ENST00000340417 ARHGEF40Q8TER5 1519 aa15.13■□□□□ 0.01
LIN54-201ENST00000340417 ITGA6P23229 1130 aa15.13■□□□□ 0.01
LIN54-201ENST00000340417 ADGRB3O60242 1522 aa15.13■□□□□ 0.01
LIN54-201ENST00000340417 ASAP1Q9ULH1 1129 aa15.13■□□□□ 0.01
LIN54-201ENST00000340417 EN1Q05925 392 aaPredicted RBP15.13■□□□□ 0.01
LIN54-201ENST00000340417 TNS3Q68CZ2 1445 aa15.13■□□□□ 0.01
LIN54-201ENST00000340417 TPM1P09493 284 aa15.13■□□□□ 0.01
LIN54-201ENST00000340417 METTL22Q9BUU2 404 aaPredicted RBP15.13■□□□□ 0.01
LIN54-201ENST00000340417 ZHX3Q9H4I2 956 aa15.13■□□□□ 0.01
LIN54-201ENST00000340417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.13■□□□□ 0.015e-8■□□□□ 10.8
LIN54-201ENST00000340417 GOLGA6L19H0YKK7 550 aa15.12■□□□□ 0.01
LIN54-201ENST00000340417 TCIRG1Q13488 830 aa15.12■□□□□ 0.01
LIN54-201ENST00000340417 WASF1Q92558 559 aa15.12■□□□□ 0.01
LIN54-201ENST00000340417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.12■□□□□ 0.01
LIN54-201ENST00000340417 HIBADHP31937 336 aaKnown RBP15.12■□□□□ 0.01
LIN54-201ENST00000340417 EPS15P42566 896 aa15.12■□□□□ 0.01
LIN54-201ENST00000340417 PPP4R3BQ5MIZ7 849 aa15.11■□□□□ 0.01
LIN54-201ENST00000340417 EVI5LQ96CN4 794 aa15.11■□□□□ 0.01
LIN54-201ENST00000340417 ERBB3P21860 1342 aa15.11■□□□□ 0.01
LIN54-201ENST00000340417 PDCP20941 246 aa15.11■□□□□ 0.01
LIN54-201ENST00000340417 PICK1Q9NRD5 415 aa15.11■□□□□ 0.01
LIN54-201ENST00000340417 DIP2CQ9Y2E4 1556 aa15.11■□□□□ 0.01
LIN54-201ENST00000340417 RTL1A6NKG5 1358 aa15.11■□□□□ 0.01
LIN54-201ENST00000340417 SYNMO15061 1565 aa15.11■□□□□ 0.01
LIN54-201ENST00000340417 PLS1Q14651 629 aa15.11■□□□□ 0.01
LIN54-201ENST00000340417 MEIS3Q99687 375 aa15.11■□□□□ 0.01
LIN54-201ENST00000340417 KAT14Q9H8E8 782 aa15.11■□□□□ 0.01
LIN54-201ENST00000340417 PSDA5PKW4 1024 aaPredicted RBP15.11■□□□□ 0.01
LIN54-201ENST00000340417 HOXB7P09629 217 aa15.11■□□□□ 0.01
LIN54-201ENST00000340417 PRKG1Q13976 671 aa15.11■□□□□ 0.01
LIN54-201ENST00000340417 PDRG1Q9NUG6 133 aa15.11■□□□□ 0.01
LIN54-201ENST00000340417 ZBTB7AO95365 584 aa15.1■□□□□ 0.01
LIN54-201ENST00000340417 MRPL50Q8N5N7 158 aaKnown RBP15.1■□□□□ 0.01
LIN54-201ENST00000340417 HOOK2Q96ED9 719 aa15.1■□□□□ 0.01
LIN54-201ENST00000340417 IFIT3O14879 490 aaKnown RBP15.1■□□□□ 0.01
LIN54-201ENST00000340417 TSPY3P0CV98 308 aa15.1■□□□□ 0.01
LIN54-201ENST00000340417 TSPY8P0CW00 308 aa15.1■□□□□ 0.01
LIN54-201ENST00000340417 MCM2P49736 904 aa15.1■□□□□ 0.01
LIN54-201ENST00000340417 CATIPQ7Z7H3 387 aa15.1■□□□□ 0.01
LIN54-201ENST00000340417 SLC4A4Q9Y6R1 1079 aa15.1■□□□□ 0.01
LIN54-201ENST00000340417 ARHGAP45Q92619 1136 aa15.1■□□□□ 0.01
LIN54-201ENST00000340417 DENND2AQ9ULE3 1009 aa15.1■□□□□ 0.01
LIN54-201ENST00000340417 MAST3O60307 1309 aa15.1■□□□□ 0.01
LIN54-201ENST00000340417 MATR3P43243 847 aaKnown RBP eCLIP15.1■□□□□ 0.018e-6■□□□□ 9.7
LIN54-201ENST00000340417 MAGEB6P1A0A0J9YX57 407 aa15.09■□□□□ 0.01
LIN54-201ENST00000340417 ATP7BP35670 1465 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms