RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 PRAMEF22A3QJZ6 481 aa13.69□□□□□ -0.22
ZNF648-201ENST00000339948 PSMA5P28066 241 aa13.69□□□□□ -0.22
ZNF648-201ENST00000339948 SLFNL1Q499Z3 407 aa13.69□□□□□ -0.22
ZNF648-201ENST00000339948 ZSCAN31Q96LW9 406 aaPredicted RBP13.69□□□□□ -0.22
ZNF648-201ENST00000339948 PPP6R1Q9UPN7 881 aa13.69□□□□□ -0.22
ZNF648-201ENST00000339948 EDC4Q6P2E9 1401 aaKnown RBP13.68□□□□□ -0.22
ZNF648-201ENST00000339948 BTBD11A6QL63 1104 aa13.68□□□□□ -0.22
ZNF648-201ENST00000339948 CEBPAP49715 358 aaPredicted RBP13.68□□□□□ -0.22
ZNF648-201ENST00000339948 ZNF75DP51815 510 aa13.68□□□□□ -0.22
ZNF648-201ENST00000339948 OTUD7BQ6GQQ9 843 aa13.68□□□□□ -0.22
ZNF648-201ENST00000339948 RIC3Q7Z5B4 369 aa13.68□□□□□ -0.22
ZNF648-201ENST00000339948 TTC14Q96N46 770 aa13.68□□□□□ -0.22
ZNF648-201ENST00000339948 SEC62Q99442 399 aaKnown RBP13.68□□□□□ -0.22
ZNF648-201ENST00000339948 TPM3P06753 285 aa13.68□□□□□ -0.22
ZNF648-201ENST00000339948 DDX46Q7L014 1031 aaKnown RBP13.68□□□□□ -0.22
ZNF648-201ENST00000339948 LEO1Q8WVC0 666 aaPredicted RBP13.68□□□□□ -0.22
ZNF648-201ENST00000339948 LRRC59Q96AG4 307 aaKnown RBP13.68□□□□□ -0.22
ZNF648-201ENST00000339948 NCOA5Q9HCD5 579 aaKnown RBP13.68□□□□□ -0.22
ZNF648-201ENST00000339948 SH2B1Q9NRF2 756 aaPredicted RBP13.68□□□□□ -0.22
ZNF648-201ENST00000339948 HSP90AB4PQ58FF6 505 aa13.68□□□□□ -0.22
ZNF648-201ENST00000339948 ZNF530Q6P9A1 599 aaPredicted RBP13.68□□□□□ -0.22
ZNF648-201ENST00000339948 AOPEPQ8N6M6 819 aa13.68□□□□□ -0.22
ZNF648-201ENST00000339948 KIAA1210Q9ULL0 1709 aa13.67□□□□□ -0.22
ZNF648-201ENST00000339948 CCDC171Q6TFL3 1326 aa13.67□□□□□ -0.22
ZNF648-201ENST00000339948 UHRF1BP1LA0JNW5 1464 aa13.67□□□□□ -0.22
ZNF648-201ENST00000339948 POLR3DP05423 398 aaPredicted RBP13.67□□□□□ -0.22
ZNF648-201ENST00000339948 CCAR1Q8IX12 1150 aaKnown RBP13.67□□□□□ -0.22
ZNF648-201ENST00000339948 SSH3Q8TE77 659 aa13.67□□□□□ -0.22
ZNF648-201ENST00000339948 STAP2Q9UGK3 403 aa13.67□□□□□ -0.22
ZNF648-201ENST00000339948 SETBP1Q9Y6X0 1596 aa13.67□□□□□ -0.22
ZNF648-201ENST00000339948 PTPRMP28827 1452 aa13.67□□□□□ -0.22
ZNF648-201ENST00000339948 SLC27A2O14975 620 aa13.67□□□□□ -0.22
ZNF648-201ENST00000339948 PDE4CQ08493 712 aa13.67□□□□□ -0.22
ZNF648-201ENST00000339948 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
ZNF648-201ENST00000339948 SCAND2PQ9GZW5 306 aaPredicted RBP13.67□□□□□ -0.22
ZNF648-201ENST00000339948 CCDC69A6NI79 296 aa13.66□□□□□ -0.22
ZNF648-201ENST00000339948 PROSER3Q2NL68 480 aa13.66□□□□□ -0.22
ZNF648-201ENST00000339948 C11orf57Q6ZUT1 292 aaPredicted RBP13.66□□□□□ -0.22
ZNF648-201ENST00000339948 KIF24Q5T7B8 1368 aa13.66□□□□□ -0.22
ZNF648-201ENST00000339948 Q6ZUG5 572 aa13.66□□□□□ -0.22
ZNF648-201ENST00000339948 ZNF589Q86UQ0 364 aaPredicted RBP13.66□□□□□ -0.22
ZNF648-201ENST00000339948 SKIDA1Q1XH10 827 aa13.65□□□□□ -0.22
ZNF648-201ENST00000339948 CCDC85AQ96PX6 553 aaPredicted RBP13.65□□□□□ -0.22
ZNF648-201ENST00000339948 SPTLC3Q9NUV7 552 aa13.65□□□□□ -0.22
ZNF648-201ENST00000339948 KIAA0232Q92628 1395 aa13.65□□□□□ -0.22
ZNF648-201ENST00000339948 TMC6Q7Z403 805 aa13.65□□□□□ -0.22
ZNF648-201ENST00000339948 FSIP1Q8NA03 581 aa13.65□□□□□ -0.22
ZNF648-201ENST00000339948 GTPBP4Q9BZE4 634 aaKnown RBP13.65□□□□□ -0.22
ZNF648-201ENST00000339948 MROH1Q8NDA8 1641 aa13.65□□□□□ -0.22
ZNF648-201ENST00000339948 HTATSF1O43719 755 aaKnown RBP13.65□□□□□ -0.22
ZNF648-201ENST00000339948 CREBRFQ8IUR6 639 aa13.65□□□□□ -0.22
ZNF648-201ENST00000339948 EAF2Q96CJ1 260 aaPredicted RBP13.65□□□□□ -0.22
ZNF648-201ENST00000339948 SLC39A6Q13433 755 aa13.64□□□□□ -0.23
ZNF648-201ENST00000339948 CPS1P31327 1500 aa13.64□□□□□ -0.23
ZNF648-201ENST00000339948 A0A1B0GVL5 298 aa13.64□□□□□ -0.23
ZNF648-201ENST00000339948 SMTNL1A8MU46 457 aa13.64□□□□□ -0.23
ZNF648-201ENST00000339948 EVI5LQ96CN4 794 aa13.64□□□□□ -0.23
ZNF648-201ENST00000339948 DDX19AQ9NUU7 478 aaKnown RBP13.64□□□□□ -0.23
ZNF648-201ENST00000339948 ZC3H13Q5T200 1668 aaKnown RBP13.64□□□□□ -0.23
ZNF648-201ENST00000339948 HDGFP51858 240 aaKnown RBP13.64□□□□□ -0.23
ZNF648-201ENST00000339948 HAND2P61296 217 aa13.64□□□□□ -0.23
ZNF648-201ENST00000339948 APOBRQ0VD83 1088 aa13.64□□□□□ -0.23
ZNF648-201ENST00000339948 ST3GAL1Q11201 340 aa13.64□□□□□ -0.23
ZNF648-201ENST00000339948 SYT10Q6XYQ8 523 aa13.64□□□□□ -0.23
ZNF648-201ENST00000339948 ZSWIM4Q9H7M6 989 aa13.64□□□□□ -0.23
ZNF648-201ENST00000339948 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.64□□□□□ -0.23
ZNF648-201ENST00000339948 SALL3Q9BXA9 1300 aa13.64□□□□□ -0.23
ZNF648-201ENST00000339948 ATP5J2-PTCD1G3V325 749 aa13.63□□□□□ -0.23
ZNF648-201ENST00000339948 PTCD1O75127 700 aaKnown RBP13.63□□□□□ -0.23
ZNF648-201ENST00000339948 HSP90AB3PQ58FF7 597 aa13.63□□□□□ -0.23
ZNF648-201ENST00000339948 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
ZNF648-201ENST00000339948 PDILTQ8N807 584 aa13.63□□□□□ -0.23
ZNF648-201ENST00000339948 MYO3AQ8NEV4 1616 aa13.63□□□□□ -0.23
ZNF648-201ENST00000339948 PGBD1Q96JS3 809 aa13.63□□□□□ -0.23
ZNF648-201ENST00000339948 KNDC1Q76NI1 1749 aa13.63□□□□□ -0.23
ZNF648-201ENST00000339948 GTF2F1P35269 517 aaKnown RBP eCLIP13.63□□□□□ -0.23
ZNF648-201ENST00000339948 GOLGA8FQ08AF8 430 aa13.63□□□□□ -0.23
ZNF648-201ENST00000339948 GOLGA8DPQ0D2H9 430 aa13.63□□□□□ -0.23
ZNF648-201ENST00000339948 C1orf141Q5JVX7 400 aa13.63□□□□□ -0.23
ZNF648-201ENST00000339948 BICC1Q9H694 974 aaKnown RBP13.63□□□□□ -0.23
ZNF648-201ENST00000339948 ZSWIM6Q9HCJ5 1215 aa13.63□□□□□ -0.23
ZNF648-201ENST00000339948 MAP2P11137 1827 aaKnown RBP13.63□□□□□ -0.23
ZNF648-201ENST00000339948 NPHP3Q7Z494 1330 aa13.63□□□□□ -0.23
ZNF648-201ENST00000339948 OSCARQ8IYS5 282 aa13.63□□□□□ -0.23
ZNF648-201ENST00000339948 OGFRQ9NZT2 677 aa13.63□□□□□ -0.23
ZNF648-201ENST00000339948 ATP2B1P20020 1258 aa13.62□□□□□ -0.23
ZNF648-201ENST00000339948 LMOD1P29536 600 aaPredicted RBP13.62□□□□□ -0.23
ZNF648-201ENST00000339948 ERCC6LQ2NKX8 1250 aa13.62□□□□□ -0.23
ZNF648-201ENST00000339948 TTLL5Q6EMB2 1281 aa13.62□□□□□ -0.23
ZNF648-201ENST00000339948 TMEM87AQ8NBN3 555 aa13.62□□□□□ -0.23
ZNF648-201ENST00000339948 FUCA2Q9BTY2 467 aa13.62□□□□□ -0.23
ZNF648-201ENST00000339948 INO80Q9ULG1 1556 aaPredicted RBP13.62□□□□□ -0.23
ZNF648-201ENST00000339948 STK38Q15208 465 aa13.62□□□□□ -0.23
ZNF648-201ENST00000339948 MNS1Q8NEH6 495 aa13.62□□□□□ -0.23
ZNF648-201ENST00000339948 KIF18AQ8NI77 898 aa13.62□□□□□ -0.23
ZNF648-201ENST00000339948 NEK1Q96PY6 1258 aa13.62□□□□□ -0.23
ZNF648-201ENST00000339948 CLSTN2Q9H4D0 955 aa13.62□□□□□ -0.23
ZNF648-201ENST00000339948 VWDEQ8N2E2 1590 aa13.61□□□□□ -0.23
ZNF648-201ENST00000339948 NEXMIFQ5QGS0 1516 aa13.61□□□□□ -0.23
ZNF648-201ENST00000339948 NRDCO43847 1150 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms