RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 Q6ZUG5 572 aa13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 CDC37L1Q7L3B6 337 aa13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 ERCC4Q92889 916 aaPredicted RBP13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 CLIP2Q9UDT6 1046 aa13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 ZHX1Q9UKY1 873 aaPredicted RBP13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 IBTKQ9P2D0 1353 aaPredicted RBP13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 SETD1BQ9UPS6 1966 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 CCDC171Q6TFL3 1326 aa13.06□□□□□ -0.32
SEMA4D-201ENST00000339861 ME3Q16798 604 aa13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 PDILTQ8N807 584 aa13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 AK9Q5TCS8 1911 aa13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 HECW2Q9P2P5 1572 aa13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 LMBR1LQ6UX01 489 aa13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 IL25Q9H293 177 aa13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 AATKQ6ZMQ8 1374 aa13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 GCP02774 474 aa13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 CDK11BP21127 795 aaKnown RBP13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 CEP126Q9P2H0 1117 aa13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 JAK2O60674 1132 aa13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 IFIT1P09914 478 aaKnown RBP13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 TFCP2Q12800 502 aa13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 TRIM29Q14134 588 aa13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 AKAP4Q5JQC9 854 aa13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 CPLX2Q6PUV4 134 aaKnown RBP13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 CCDC144CPQ8IYA2 1237 aa13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 CCDC112Q8NEF3 446 aa13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 CFAP45Q9UL16 551 aa13.05□□□□□ -0.32
SEMA4D-201ENST00000339861 ADGRB1O14514 1584 aa13.04□□□□□ -0.32
SEMA4D-201ENST00000339861 PDCL2Q8N4E4 241 aa13.04□□□□□ -0.32
SEMA4D-201ENST00000339861 TLR7Q9NYK1 1049 aaKnown RBP13.04□□□□□ -0.32
SEMA4D-201ENST00000339861 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.04□□□□□ -0.32
SEMA4D-201ENST00000339861 V9GYY5 206 aaPredicted RBP13.04□□□□□ -0.32
SEMA4D-201ENST00000339861 MROH2AA6NES4 1674 aa13.04□□□□□ -0.32
SEMA4D-201ENST00000339861 TYRO3Q06418 890 aa13.04□□□□□ -0.32
SEMA4D-201ENST00000339861 CCDC57Q2TAC2 916 aa13.04□□□□□ -0.32
SEMA4D-201ENST00000339861 LINS1Q8NG48 757 aa13.04□□□□□ -0.32
SEMA4D-201ENST00000339861 DDX17Q92841 729 aaKnown RBP13.04□□□□□ -0.32
SEMA4D-201ENST00000339861 EAF2Q96CJ1 260 aaPredicted RBP13.04□□□□□ -0.32
SEMA4D-201ENST00000339861 MYOM1P52179 1685 aa13.04□□□□□ -0.32
SEMA4D-201ENST00000339861 IDH1O75874 414 aaKnown RBP13.04□□□□□ -0.32
SEMA4D-201ENST00000339861 TIMM10P62072 90 aa13.04□□□□□ -0.32
SEMA4D-201ENST00000339861 KRT32Q14532 448 aa13.04□□□□□ -0.32
SEMA4D-201ENST00000339861 KRT28Q7Z3Y7 464 aa13.04□□□□□ -0.32
SEMA4D-201ENST00000339861 RNMTO43148 476 aaKnown RBP13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 SEC62Q99442 399 aaKnown RBP13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 OSBPL3Q9H4L5 887 aa13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 MTMR7Q9Y216 660 aa13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 TNNT1P13805 278 aa13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 CCDC158Q5M9N0 1113 aa13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 PPP4R3BQ5MIZ7 849 aa13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 FSIP1Q8NA03 581 aa13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 TMEM2Q9UHN6 1383 aa13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 A0A0D9SFI3 127 aa13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 SLC27A2O14975 620 aa13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 MCM5P33992 734 aa13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 APOBRQ0VD83 1088 aa13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 HSP90AA4PQ58FG1 418 aa13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 RASSF8Q8NHQ8 419 aa13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 ZNF396Q96N95 335 aaPredicted RBP13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 NCOA5Q9HCD5 579 aaKnown RBP13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 CNNM1Q9NRU3 951 aa13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 ATP7BP35670 1465 aa13.03□□□□□ -0.32
SEMA4D-201ENST00000339861 BEND3Q5T5X7 828 aa13.02□□□□□ -0.32
SEMA4D-201ENST00000339861 VPS53Q5VIR6 699 aa13.02□□□□□ -0.32
SEMA4D-201ENST00000339861 IP6K1Q92551 441 aa13.02□□□□□ -0.32
SEMA4D-201ENST00000339861 PTPRMP28827 1452 aa13.02□□□□□ -0.32
SEMA4D-201ENST00000339861 KIF24Q5T7B8 1368 aa13.02□□□□□ -0.32
SEMA4D-201ENST00000339861 NEO1Q92859 1461 aa13.02□□□□□ -0.32
SEMA4D-201ENST00000339861 A0A087WWV3 80 aa13.02□□□□□ -0.32
SEMA4D-201ENST00000339861 TPM3P06753 285 aa13.02□□□□□ -0.32
SEMA4D-201ENST00000339861 LIG1P18858 919 aa13.02□□□□□ -0.32
SEMA4D-201ENST00000339861 GPTP24298 496 aa13.02□□□□□ -0.32
SEMA4D-201ENST00000339861 DDIT3P35638 169 aa13.02□□□□□ -0.32
SEMA4D-201ENST00000339861 CCAR1Q8IX12 1150 aaKnown RBP13.02□□□□□ -0.32
SEMA4D-201ENST00000339861 ZBTB9Q96C00 473 aa13.02□□□□□ -0.32
SEMA4D-201ENST00000339861 DBNDD2Q9BQY9 259 aa13.02□□□□□ -0.32
SEMA4D-201ENST00000339861 INO80Q9ULG1 1556 aaPredicted RBP13.02□□□□□ -0.33
SEMA4D-201ENST00000339861 TTLL5Q6EMB2 1281 aa13.02□□□□□ -0.33
SEMA4D-201ENST00000339861 PRDM11Q9NQV5 511 aa13.02□□□□□ -0.33
SEMA4D-201ENST00000339861 TPCN1Q9ULQ1 816 aa13.02□□□□□ -0.33
SEMA4D-201ENST00000339861 SETBP1Q9Y6X0 1596 aa13.02□□□□□ -0.33
SEMA4D-201ENST00000339861 TTC41PQ6P2S7 1318 aa13.02□□□□□ -0.33
SEMA4D-201ENST00000339861 CAMSAP1Q5T5Y3 1602 aa13.02□□□□□ -0.33
SEMA4D-201ENST00000339861 MTERF4Q7Z6M4 381 aaKnown RBP13.02□□□□□ -0.33
SEMA4D-201ENST00000339861 FAM200AQ8TCP9 573 aa13.02□□□□□ -0.33
SEMA4D-201ENST00000339861 LSG1Q9H089 658 aaKnown RBP13.02□□□□□ -0.33
SEMA4D-201ENST00000339861 KIDINS220Q9ULH0 1771 aa13.01□□□□□ -0.33
SEMA4D-201ENST00000339861 DYNC1I1O14576 645 aa13.01□□□□□ -0.33
SEMA4D-201ENST00000339861 UVSSAQ2YD98 709 aa13.01□□□□□ -0.33
SEMA4D-201ENST00000339861 HS1BP3Q53T59 392 aa13.01□□□□□ -0.33
SEMA4D-201ENST00000339861 OTUD7BQ6GQQ9 843 aa13.01□□□□□ -0.33
SEMA4D-201ENST00000339861 NAT10Q9H0A0 1025 aaKnown RBP13.01□□□□□ -0.33
SEMA4D-201ENST00000339861 CDK12Q9NYV4 1490 aaPredicted RBP13.01□□□□□ -0.33
SEMA4D-201ENST00000339861 GTF2E1P29083 439 aaPredicted RBP13.01□□□□□ -0.33
SEMA4D-201ENST00000339861 TMX1Q9H3N1 280 aa13.01□□□□□ -0.33
SEMA4D-201ENST00000339861 ALKQ9UM73 1620 aa13.01□□□□□ -0.33
SEMA4D-201ENST00000339861 ALDH1L1O75891 902 aa13.01□□□□□ -0.33
SEMA4D-201ENST00000339861 LRRFIP1Q32MZ4 808 aaKnown RBP13.01□□□□□ -0.33
SEMA4D-201ENST00000339861 ARAP3Q8WWN8 1544 aa13□□□□□ -0.33
SEMA4D-201ENST00000339861 CEP57L1Q8IYX8 460 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms