RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 TNMDQ9H2S6 317 aa10.92□□□□□ -0.66
RPGR-202ENST00000339363 ZCCHC17Q9NP64 241 aaKnown RBP10.92□□□□□ -0.66
RPGR-202ENST00000339363 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.92□□□□□ -0.66
RPGR-202ENST00000339363 CEP83Q9Y592 693 aa10.92□□□□□ -0.66
RPGR-202ENST00000339363 MAP3K19Q56UN5 1328 aa10.92□□□□□ -0.66
RPGR-202ENST00000339363 RBM6P78332 1123 aaKnown RBP10.92□□□□□ -0.66
RPGR-202ENST00000339363 FAM177A1Q8N128 213 aaPredicted RBP10.92□□□□□ -0.66
RPGR-202ENST00000339363 FAM200AQ8TCP9 573 aa10.92□□□□□ -0.66
RPGR-202ENST00000339363 DLC1Q96QB1 1528 aa10.92□□□□□ -0.66
RPGR-202ENST00000339363 ANKRD65E5RJM6 399 aa10.91□□□□□ -0.66
RPGR-202ENST00000339363 WASLO00401 505 aaPredicted RBP10.91□□□□□ -0.66
RPGR-202ENST00000339363 IBSPP21815 317 aaPredicted RBP10.91□□□□□ -0.66
RPGR-202ENST00000339363 ZSCAN25Q6NSZ9 544 aa10.91□□□□□ -0.66
RPGR-202ENST00000339363 DNAAF4Q8WXU2 420 aa10.91□□□□□ -0.66
RPGR-202ENST00000339363 CRB1P82279 1406 aa10.91□□□□□ -0.66
RPGR-202ENST00000339363 CCDC172P0C7W6 258 aa10.91□□□□□ -0.66
RPGR-202ENST00000339363 OAS2P29728 719 aaKnown RBP10.91□□□□□ -0.66
RPGR-202ENST00000339363 ANKRD20A12PQ8NF67 263 aa10.91□□□□□ -0.66
RPGR-202ENST00000339363 BICD2Q8TD16 824 aa10.91□□□□□ -0.66
RPGR-202ENST00000339363 CCDC171Q6TFL3 1326 aa10.91□□□□□ -0.66
RPGR-202ENST00000339363 PEAK1Q9H792 1746 aa10.91□□□□□ -0.66
RPGR-202ENST00000339363 CASTP20810 708 aaKnown RBP10.91□□□□□ -0.66
RPGR-202ENST00000339363 FAM212AQ96EL1 285 aa10.91□□□□□ -0.66
RPGR-202ENST00000339363 BRMS1Q9HCU9 246 aa10.91□□□□□ -0.66
RPGR-202ENST00000339363 TAF6LQ9Y6J9 622 aa10.91□□□□□ -0.66
RPGR-202ENST00000339363 CUL4AQ13619 759 aa10.9□□□□□ -0.66
RPGR-202ENST00000339363 RPAP2Q8IXW5 612 aaPredicted RBP10.9□□□□□ -0.66
RPGR-202ENST00000339363 SMARCE1Q969G3 411 aa10.9□□□□□ -0.66
RPGR-202ENST00000339363 KIAA0232Q92628 1395 aa10.9□□□□□ -0.66
RPGR-202ENST00000339363 URI1O94763 535 aaPredicted RBP10.9□□□□□ -0.66
RPGR-202ENST00000339363 ST5P78524 1137 aa10.9□□□□□ -0.66
RPGR-202ENST00000339363 ST3GAL1Q11201 340 aa10.9□□□□□ -0.66
RPGR-202ENST00000339363 SNW1Q13573 536 aaKnown RBP10.9□□□□□ -0.66
RPGR-202ENST00000339363 CT47A1Q5JQC4 288 aaPredicted RBP10.9□□□□□ -0.66
RPGR-202ENST00000339363 PHAXQ9H814 394 aaKnown RBP10.9□□□□□ -0.66
RPGR-202ENST00000339363 SPG7Q9UQ90 795 aa10.9□□□□□ -0.66
RPGR-202ENST00000339363 TUBGCP6Q96RT7 1819 aa10.9□□□□□ -0.66
RPGR-202ENST00000339363 PREX1Q8TCU6 1659 aa10.9□□□□□ -0.66
RPGR-202ENST00000339363 ANXA1P04083 346 aa10.9□□□□□ -0.66
RPGR-202ENST00000339363 GUCY2CP25092 1073 aa10.9□□□□□ -0.66
RPGR-202ENST00000339363 MAP2K2P36507 400 aa10.9□□□□□ -0.66
RPGR-202ENST00000339363 ANO6Q4KMQ2 910 aa10.9□□□□□ -0.66
RPGR-202ENST00000339363 COG3Q96JB2 828 aa10.9□□□□□ -0.66
RPGR-202ENST00000339363 LCMT1Q9UIC8 334 aa10.9□□□□□ -0.66
RPGR-202ENST00000339363 STAG3Q9UJ98 1225 aa10.9□□□□□ -0.66
RPGR-202ENST00000339363 PNMA6AP0CW24 399 aaPredicted RBP10.89□□□□□ -0.67
RPGR-202ENST00000339363 CLCN6P51797 869 aa10.89□□□□□ -0.67
RPGR-202ENST00000339363 ADCK5Q3MIX3 580 aa10.89□□□□□ -0.67
RPGR-202ENST00000339363 MICALL1Q8N3F8 863 aa10.89□□□□□ -0.67
RPGR-202ENST00000339363 CDK12Q9NYV4 1490 aaPredicted RBP10.89□□□□□ -0.67
RPGR-202ENST00000339363 GOLIM4O00461 696 aa10.89□□□□□ -0.67
RPGR-202ENST00000339363 NUTM2GQ5VZR2 741 aa10.89□□□□□ -0.67
RPGR-202ENST00000339363 ZNF165P49910 485 aa10.89□□□□□ -0.67
RPGR-202ENST00000339363 RUFY3Q7L099 469 aa10.89□□□□□ -0.67
RPGR-202ENST00000339363 CHGBP05060 677 aa10.88□□□□□ -0.67
RPGR-202ENST00000339363 NOP2P46087 812 aaKnown RBP10.88□□□□□ -0.67
RPGR-202ENST00000339363 HSP90B2PQ58FF3 399 aa10.88□□□□□ -0.67
RPGR-202ENST00000339363 CACTINQ8WUQ7 758 aaKnown RBP10.88□□□□□ -0.67
RPGR-202ENST00000339363 SEC31AO94979 1220 aaKnown RBP10.88□□□□□ -0.67
RPGR-202ENST00000339363 FERMT3Q86UX7 667 aa10.88□□□□□ -0.67
RPGR-202ENST00000339363 OSBPL3Q9H4L5 887 aa10.88□□□□□ -0.67
RPGR-202ENST00000339363 IVLP07476 585 aa10.88□□□□□ -0.67
RPGR-202ENST00000339363 CALRP27797 417 aaKnown RBP10.88□□□□□ -0.67
RPGR-202ENST00000339363 PSEN1P49768 467 aa10.88□□□□□ -0.67
RPGR-202ENST00000339363 TYRO3Q06418 890 aa10.88□□□□□ -0.67
RPGR-202ENST00000339363 GIMAP7Q8NHV1 300 aa10.88□□□□□ -0.67
RPGR-202ENST00000339363 TCEANC2Q96MN5 208 aa10.88□□□□□ -0.67
RPGR-202ENST00000339363 ATP6V1AP38606 617 aa10.87□□□□□ -0.67
RPGR-202ENST00000339363 USP44Q9H0E7 712 aa10.87□□□□□ -0.67
RPGR-202ENST00000339363 ATP7BP35670 1465 aa10.87□□□□□ -0.67
RPGR-202ENST00000339363 EDC4Q6P2E9 1401 aaKnown RBP10.87□□□□□ -0.67
RPGR-202ENST00000339363 A0A087WWV3 80 aa10.87□□□□□ -0.67
RPGR-202ENST00000339363 KIF2AO00139 706 aaPredicted RBP10.87□□□□□ -0.67
RPGR-202ENST00000339363 SMC1AQ14683 1233 aaKnown RBP10.87□□□□□ -0.67
RPGR-202ENST00000339363 SAMD1Q6SPF0 538 aaPredicted RBP10.87□□□□□ -0.67
RPGR-202ENST00000339363 SRLQ86TD4 932 aa10.87□□□□□ -0.67
RPGR-202ENST00000339363 TSPYL4Q9UJ04 414 aa10.87□□□□□ -0.67
RPGR-202ENST00000339363 SOS1Q07889 1333 aaPredicted RBP10.87□□□□□ -0.67
RPGR-202ENST00000339363 H0YHG0 523 aa10.87□□□□□ -0.67
RPGR-202ENST00000339363 DNM1Q05193 864 aaKnown RBP10.87□□□□□ -0.67
RPGR-202ENST00000339363 GOLGA5Q8TBA6 731 aa10.87□□□□□ -0.67
RPGR-202ENST00000339363 CXorf56Q9H5V9 222 aa10.87□□□□□ -0.67
RPGR-202ENST00000339363 VPS18Q9P253 973 aa10.87□□□□□ -0.67
RPGR-202ENST00000339363 CCDC69A6NI79 296 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 NBPF7P0C2Y1 421 aaPredicted RBP10.86□□□□□ -0.67
RPGR-202ENST00000339363 AK2P54819 239 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 PTH1RQ03431 593 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 MCM6Q14566 821 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 HSP90AB3PQ58FF7 597 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 USHBP1Q8N6Y0 703 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 PPM1EQ8WY54 764 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 SIRT1Q96EB6 747 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 CEP170BQ9Y4F5 1589 aaPredicted RBP10.86□□□□□ -0.67
RPGR-202ENST00000339363 SETD1AO15047 1707 aaKnown RBP10.86□□□□□ -0.67
RPGR-202ENST00000339363 STX6O43752 255 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 ZNF75DP51815 510 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 PPP2R5AQ15172 486 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 NECAB1Q8N987 351 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 DNAJC25Q9H1X3 360 aa10.86□□□□□ -0.67
RPGR-202ENST00000339363 PDRG1Q9NUG6 133 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms