RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 PTPN14Q15678 1187 aa24.08■■□□□ 1.45
RUNX3-202ENST00000338888 MAP3K19Q56UN5 1328 aa24.08■■□□□ 1.45
RUNX3-202ENST00000338888 COL9A3Q14050 684 aaPredicted RBP24.07■■□□□ 1.44
RUNX3-202ENST00000338888 RBM43Q6ZSC3 357 aaKnown RBP24.07■■□□□ 1.44
RUNX3-202ENST00000338888 TM6SF1Q9BZW5 370 aa24.07■■□□□ 1.44
RUNX3-202ENST00000338888 SCAND2PQ9GZW5 306 aaPredicted RBP24.07■■□□□ 1.44
RUNX3-202ENST00000338888 RIMS1Q86UR5 1692 aaKnown RBP24.07■■□□□ 1.44
RUNX3-202ENST00000338888 SLIT1O75093 1534 aa24.07■■□□□ 1.44
RUNX3-202ENST00000338888 CCDC66A2RUB6 948 aa24.07■■□□□ 1.44
RUNX3-202ENST00000338888 ERICH4A6NGS2 130 aa24.07■■□□□ 1.44
RUNX3-202ENST00000338888 FBXO38Q6PIJ6 1188 aa24.07■■□□□ 1.44
RUNX3-202ENST00000338888 BICD2Q8TD16 824 aa24.07■■□□□ 1.44
RUNX3-202ENST00000338888 LEO1Q8WVC0 666 aaPredicted RBP24.07■■□□□ 1.44
RUNX3-202ENST00000338888 ARHGAP23Q9P227 1491 aa24.07■■□□□ 1.44
RUNX3-202ENST00000338888 NPHP3Q7Z494 1330 aa24.07■■□□□ 1.44
RUNX3-202ENST00000338888 POLA2Q14181 598 aa24.06■■□□□ 1.44
RUNX3-202ENST00000338888 ELF2Q15723 593 aa24.06■■□□□ 1.44
RUNX3-202ENST00000338888 RUFY2Q8WXA3 655 aa24.06■■□□□ 1.44
RUNX3-202ENST00000338888 TRMT1Q9NXH9 659 aaKnown RBP24.06■■□□□ 1.44
RUNX3-202ENST00000338888 TBX22Q9Y458 520 aa24.06■■□□□ 1.44
RUNX3-202ENST00000338888 TCEANC2Q96MN5 208 aa24.06■■□□□ 1.44
RUNX3-202ENST00000338888 ST7Q9NRC1 585 aa24.06■■□□□ 1.44
RUNX3-202ENST00000338888 VGLL3A8MV65 326 aa24.05■■□□□ 1.44
RUNX3-202ENST00000338888 NPHP1O15259 732 aa24.05■■□□□ 1.44
RUNX3-202ENST00000338888 NRKQ7Z2Y5 1582 aa24.05■■□□□ 1.44
RUNX3-202ENST00000338888 CCDC171Q6TFL3 1326 aa24.05■■□□□ 1.44
RUNX3-202ENST00000338888 RBM6P78332 1123 aaKnown RBP24.05■■□□□ 1.44
RUNX3-202ENST00000338888 SKILP12757 684 aa24.04■■□□□ 1.44
RUNX3-202ENST00000338888 ZKSCAN1P17029 563 aaPredicted RBP24.04■■□□□ 1.44
RUNX3-202ENST00000338888 PDCP20941 246 aa24.04■■□□□ 1.44
RUNX3-202ENST00000338888 LARP1Q6PKG0 1096 aaKnown RBP24.04■■□□□ 1.44
RUNX3-202ENST00000338888 PGBD1Q96JS3 809 aa24.04■■□□□ 1.44
RUNX3-202ENST00000338888 IRX5P78411 483 aaPredicted RBP24.04■■□□□ 1.44
RUNX3-202ENST00000338888 NECTIN1Q15223 517 aa24.04■■□□□ 1.44
RUNX3-202ENST00000338888 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.03■■□□□ 1.44
RUNX3-202ENST00000338888 GOLGA6L19H0YKK7 550 aa24.03■■□□□ 1.44
RUNX3-202ENST00000338888 NYAP1Q6ZVC0 841 aa24.03■■□□□ 1.44
RUNX3-202ENST00000338888 PHAXQ9H814 394 aaKnown RBP24.03■■□□□ 1.44
RUNX3-202ENST00000338888 GLRX3O76003 335 aaKnown RBP24.03■■□□□ 1.44
RUNX3-202ENST00000338888 CDC25BP30305 580 aa24.02■■□□□ 1.44
RUNX3-202ENST00000338888 FAM53CQ9NYF3 392 aa24.02■■□□□ 1.44
RUNX3-202ENST00000338888 RBM8AQ9Y5S9 174 aaKnown RBP24.02■■□□□ 1.44
RUNX3-202ENST00000338888 XRN1Q8IZH2 1706 aaKnown RBP24.02■■□□□ 1.44
RUNX3-202ENST00000338888 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.02■■□□□ 1.44
RUNX3-202ENST00000338888 CREB3L3Q68CJ9 461 aa24.02■■□□□ 1.44
RUNX3-202ENST00000338888 FILIP1Q7Z7B0 1213 aa24.02■■□□□ 1.44
RUNX3-202ENST00000338888 KCNB2Q92953 911 aa24.02■■□□□ 1.44
RUNX3-202ENST00000338888 ERO1AQ96HE7 468 aa24.02■■□□□ 1.44
RUNX3-202ENST00000338888 NBPF7P0C2Y1 421 aaPredicted RBP24.01■■□□□ 1.43
RUNX3-202ENST00000338888 CDK11BP21127 795 aaKnown RBP24.01■■□□□ 1.43
RUNX3-202ENST00000338888 OS9Q13438 667 aaPredicted RBP24.01■■□□□ 1.43
RUNX3-202ENST00000338888 USP16Q9Y5T5 823 aa24.01■■□□□ 1.43
RUNX3-202ENST00000338888 TIGD1Q96MW7 591 aa24.01■■□□□ 1.43
RUNX3-202ENST00000338888 TTC21BQ7Z4L5 1316 aa24■■□□□ 1.43
RUNX3-202ENST00000338888 STK3Q13188 491 aa24■■□□□ 1.43
RUNX3-202ENST00000338888 IQCB1Q15051 598 aa24■■□□□ 1.43
RUNX3-202ENST00000338888 CCDC69A6NI79 296 aa24■■□□□ 1.43
RUNX3-202ENST00000338888 C11orf57Q6ZUT1 292 aaPredicted RBP24■■□□□ 1.43
RUNX3-202ENST00000338888 MAP3K5Q99683 1374 aa24■■□□□ 1.43
RUNX3-202ENST00000338888 PDIA4P13667 645 aaKnown RBP23.99■■□□□ 1.43
RUNX3-202ENST00000338888 ZNF446Q9NWS9 450 aa23.99■■□□□ 1.43
RUNX3-202ENST00000338888 CEP170BQ9Y4F5 1589 aaPredicted RBP23.99■■□□□ 1.43
RUNX3-202ENST00000338888 MON2Q7Z3U7 1717 aa23.99■■□□□ 1.43
RUNX3-202ENST00000338888 NEMFO60524 1076 aa23.98■■□□□ 1.43
RUNX3-202ENST00000338888 SLU7O95391 586 aaKnown RBP23.98■■□□□ 1.43
RUNX3-202ENST00000338888 KCNA6P17658 529 aa23.98■■□□□ 1.43
RUNX3-202ENST00000338888 ACEP12821 1306 aa23.98■■□□□ 1.43
RUNX3-202ENST00000338888 TTC41PQ6P2S7 1318 aa23.98■■□□□ 1.43
RUNX3-202ENST00000338888 MRFAP1L1Q96HT8 127 aa23.98■■□□□ 1.43
RUNX3-202ENST00000338888 ERBB3P21860 1342 aa23.98■■□□□ 1.43
RUNX3-202ENST00000338888 CCZ1BP86790 482 aa23.97■■□□□ 1.43
RUNX3-202ENST00000338888 CCZ1P86791 482 aaPredicted RBP23.97■■□□□ 1.43
RUNX3-202ENST00000338888 SARM1Q6SZW1 724 aa23.97■■□□□ 1.43
RUNX3-202ENST00000338888 CCAR2Q8N163 923 aaKnown RBP23.97■■□□□ 1.43
RUNX3-202ENST00000338888 RBM33Q96EV2 1170 aaKnown RBP23.97■■□□□ 1.43
RUNX3-202ENST00000338888 FAM227BQ96M60 508 aa23.97■■□□□ 1.43
RUNX3-202ENST00000338888 A0A087WWV3 80 aa23.96■■□□□ 1.43
RUNX3-202ENST00000338888 DDX11Q96FC9 970 aa23.96■■□□□ 1.43
RUNX3-202ENST00000338888 SLC27A2O14975 620 aa23.96■■□□□ 1.43
RUNX3-202ENST00000338888 HDGFL1Q5TGJ6 251 aa23.96■■□□□ 1.43
RUNX3-202ENST00000338888 BLOC1S2Q6QNY1 142 aa23.96■■□□□ 1.43
RUNX3-202ENST00000338888 ANKLE2Q86XL3 938 aa23.96■■□□□ 1.43
RUNX3-202ENST00000338888 CLASRPQ8N2M8 674 aaKnown RBP23.96■■□□□ 1.43
RUNX3-202ENST00000338888 USP42Q9H9J4 1324 aaKnown RBP23.95■■□□□ 1.43
RUNX3-202ENST00000338888 CAVIN2O95810 425 aa23.95■■□□□ 1.42
RUNX3-202ENST00000338888 PSMA5P28066 241 aa23.95■■□□□ 1.42
RUNX3-202ENST00000338888 CEBPZQ03701 1054 aaKnown RBP23.95■■□□□ 1.42
RUNX3-202ENST00000338888 SLFNL1Q499Z3 407 aa23.95■■□□□ 1.42
RUNX3-202ENST00000338888 ECHDC1Q9NTX5 307 aa23.95■■□□□ 1.42
RUNX3-202ENST00000338888 BECN2A8MW95 431 aa23.95■■□□□ 1.42
RUNX3-202ENST00000338888 MAP4K1Q92918 833 aa23.95■■□□□ 1.42
RUNX3-202ENST00000338888 TAF6LQ9Y6J9 622 aa23.95■■□□□ 1.42
RUNX3-202ENST00000338888 HSP90AB4PQ58FF6 505 aa23.94■■□□□ 1.42
RUNX3-202ENST00000338888 CALCOCO1Q9P1Z2 691 aa23.94■■□□□ 1.42
RUNX3-202ENST00000338888 PEAK1Q9H792 1746 aa23.94■■□□□ 1.42
RUNX3-202ENST00000338888 PDE4CQ08493 712 aa23.94■■□□□ 1.42
RUNX3-202ENST00000338888 ERCC6LQ2NKX8 1250 aa23.94■■□□□ 1.42
RUNX3-202ENST00000338888 SYTL4Q96C24 671 aaPredicted RBP23.94■■□□□ 1.42
RUNX3-202ENST00000338888 NAP1L2Q9ULW6 460 aaPredicted RBP23.94■■□□□ 1.42
RUNX3-202ENST00000338888 GTF3C6Q969F1 213 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms