RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 A0A0D9SFI3 127 aa16.66■□□□□ 0.26
PCDH8-201ENST00000338862 PTPN21Q16825 1174 aa16.66■□□□□ 0.26
PCDH8-201ENST00000338862 PROSER3Q2NL68 480 aa16.66■□□□□ 0.26
PCDH8-201ENST00000338862 TOMM22Q9NS69 142 aa16.66■□□□□ 0.26
PCDH8-201ENST00000338862 NLRP2Q9NX02 1062 aa16.66■□□□□ 0.26
PCDH8-201ENST00000338862 TPM3P06753 285 aa16.66■□□□□ 0.26
PCDH8-201ENST00000338862 SKILP12757 684 aa16.66■□□□□ 0.26
PCDH8-201ENST00000338862 ZC3H6P61129 1189 aaKnown RBP16.66■□□□□ 0.26
PCDH8-201ENST00000338862 COL9A3Q14050 684 aaPredicted RBP16.66■□□□□ 0.26
PCDH8-201ENST00000338862 CCAR1Q8IX12 1150 aaKnown RBP16.66■□□□□ 0.26
PCDH8-201ENST00000338862 SMAP1Q8IYB5 467 aaPredicted RBP16.66■□□□□ 0.26
PCDH8-201ENST00000338862 EVI5LQ96CN4 794 aa16.66■□□□□ 0.26
PCDH8-201ENST00000338862 CCDC171Q6TFL3 1326 aa16.66■□□□□ 0.26
PCDH8-201ENST00000338862 CPLX1O14810 134 aa16.66■□□□□ 0.26
PCDH8-201ENST00000338862 SLFNL1Q499Z3 407 aa16.66■□□□□ 0.26
PCDH8-201ENST00000338862 CEP135Q66GS9 1140 aa16.66■□□□□ 0.26
PCDH8-201ENST00000338862 Q6ZUG5 572 aa16.66■□□□□ 0.26
PCDH8-201ENST00000338862 PI4K2BQ8TCG2 481 aa16.66■□□□□ 0.26
PCDH8-201ENST00000338862 SSH3Q8TE77 659 aa16.66■□□□□ 0.26
PCDH8-201ENST00000338862 TAF6LQ9Y6J9 622 aa16.66■□□□□ 0.26
PCDH8-201ENST00000338862 COL3A1P02461 1466 aaPredicted RBP16.65■□□□□ 0.26
PCDH8-201ENST00000338862 DDX58O95786 925 aaKnown RBP16.65■□□□□ 0.26
PCDH8-201ENST00000338862 ZNF710Q8N1W2 664 aa16.65■□□□□ 0.26
PCDH8-201ENST00000338862 PDILTQ8N807 584 aa16.65■□□□□ 0.26
PCDH8-201ENST00000338862 SNRKQ9NRH2 765 aa16.65■□□□□ 0.26
PCDH8-201ENST00000338862 HSP90AB3PQ58FF7 597 aa16.65■□□□□ 0.26
PCDH8-201ENST00000338862 KIAA1524Q8TCG1 905 aa16.65■□□□□ 0.26
PCDH8-201ENST00000338862 KCNF1Q9H3M0 494 aa16.65■□□□□ 0.26
PCDH8-201ENST00000338862 CAMSAP1Q5T5Y3 1602 aa16.65■□□□□ 0.26
PCDH8-201ENST00000338862 SLC27A2O14975 620 aa16.65■□□□□ 0.26
PCDH8-201ENST00000338862 APPP05067 770 aa16.65■□□□□ 0.26
PCDH8-201ENST00000338862 TRHP20396 242 aaPredicted RBP16.65■□□□□ 0.26
PCDH8-201ENST00000338862 FKBP4Q02790 459 aaKnown RBP eCLIP16.65■□□□□ 0.26
PCDH8-201ENST00000338862 BICC1Q9H694 974 aaKnown RBP16.65■□□□□ 0.26
PCDH8-201ENST00000338862 VPS53Q5VIR6 699 aa16.64■□□□□ 0.25
PCDH8-201ENST00000338862 STK38Q15208 465 aa16.64■□□□□ 0.25
PCDH8-201ENST00000338862 FSIP1Q8NA03 581 aa16.64■□□□□ 0.25
PCDH8-201ENST00000338862 EAF2Q96CJ1 260 aaPredicted RBP16.64■□□□□ 0.25
PCDH8-201ENST00000338862 TTLL5Q6EMB2 1281 aa16.63■□□□□ 0.25
PCDH8-201ENST00000338862 KIAA0232Q92628 1395 aa16.63■□□□□ 0.25
PCDH8-201ENST00000338862 AOPEPQ8N6M6 819 aa16.63■□□□□ 0.25
PCDH8-201ENST00000338862 ZFP91Q96JP5 570 aaPredicted RBP16.63■□□□□ 0.25
PCDH8-201ENST00000338862 MRVI1Q9Y6F6 885 aa16.63■□□□□ 0.25
PCDH8-201ENST00000338862 APOBRQ0VD83 1088 aa16.63■□□□□ 0.25
PCDH8-201ENST00000338862 UBE3BQ7Z3V4 1068 aa16.63■□□□□ 0.25
PCDH8-201ENST00000338862 LEO1Q8WVC0 666 aaPredicted RBP16.63■□□□□ 0.25
PCDH8-201ENST00000338862 STAP2Q9UGK3 403 aa16.63■□□□□ 0.25
PCDH8-201ENST00000338862 CD163L1Q9NR16 1453 aa16.63■□□□□ 0.25
PCDH8-201ENST00000338862 POLR3GO15318 223 aaPredicted RBP16.62■□□□□ 0.25
PCDH8-201ENST00000338862 SKIDA1Q1XH10 827 aa16.62■□□□□ 0.25
PCDH8-201ENST00000338862 ERC1Q8IUD2 1116 aa16.62■□□□□ 0.25
PCDH8-201ENST00000338862 NEK1Q96PY6 1258 aa16.62■□□□□ 0.25
PCDH8-201ENST00000338862 DBF4Q9UBU7 674 aaPredicted RBP16.62■□□□□ 0.25
PCDH8-201ENST00000338862 RPAP1Q9BWH6 1393 aaPredicted RBP16.62■□□□□ 0.25
PCDH8-201ENST00000338862 GOLIM4O00461 696 aa16.62■□□□□ 0.25
PCDH8-201ENST00000338862 HOXC9P31274 260 aa16.62■□□□□ 0.25
PCDH8-201ENST00000338862 ANKRD1Q15327 319 aa16.62■□□□□ 0.25
PCDH8-201ENST00000338862 TAF7LQ5H9L4 462 aa16.61■□□□□ 0.25
PCDH8-201ENST00000338862 ZNF589Q86UQ0 364 aaPredicted RBP16.61■□□□□ 0.25
PCDH8-201ENST00000338862 CACTINQ8WUQ7 758 aaKnown RBP16.61■□□□□ 0.25
PCDH8-201ENST00000338862 TMC6Q7Z403 805 aa16.61■□□□□ 0.25
PCDH8-201ENST00000338862 KIF24Q5T7B8 1368 aa16.61■□□□□ 0.25
PCDH8-201ENST00000338862 A0A1B0GVL5 298 aa16.61■□□□□ 0.25
PCDH8-201ENST00000338862 PLEKHO1Q53GL0 409 aaPredicted RBP16.61■□□□□ 0.25
PCDH8-201ENST00000338862 SUCLG2Q96I99 432 aa16.61■□□□□ 0.25
PCDH8-201ENST00000338862 DDX19AQ9NUU7 478 aaKnown RBP16.61■□□□□ 0.25
PCDH8-201ENST00000338862 NRXN1Q9ULB1 1477 aa16.61■□□□□ 0.25
PCDH8-201ENST00000338862 ZNF75DP51815 510 aa16.6■□□□□ 0.25
PCDH8-201ENST00000338862 ZSCAN25Q6NSZ9 544 aa16.6■□□□□ 0.25
PCDH8-201ENST00000338862 SYNE3Q6ZMZ3 975 aa16.6■□□□□ 0.25
PCDH8-201ENST00000338862 HDAC5Q9UQL6 1122 aa16.6■□□□□ 0.25
PCDH8-201ENST00000338862 PTPRMP28827 1452 aa16.6■□□□□ 0.25
PCDH8-201ENST00000338862 CCDC69A6NI79 296 aa16.6■□□□□ 0.25
PCDH8-201ENST00000338862 CCDC82Q8N4S0 544 aa16.6■□□□□ 0.25
PCDH8-201ENST00000338862 CFAP45Q9UL16 551 aa16.6■□□□□ 0.25
PCDH8-201ENST00000338862 ARHGEF40Q8TER5 1519 aa16.6■□□□□ 0.25
PCDH8-201ENST00000338862 NBPF6Q5VWK0 638 aa16.6■□□□□ 0.25
PCDH8-201ENST00000338862 CCDC144CPQ8IYA2 1237 aa16.6■□□□□ 0.25
PCDH8-201ENST00000338862 TTC5Q8N0Z6 440 aa16.6■□□□□ 0.25
PCDH8-201ENST00000338862 MNS1Q8NEH6 495 aa16.6■□□□□ 0.25
PCDH8-201ENST00000338862 NBPF4Q96M43 638 aa16.6■□□□□ 0.25
PCDH8-201ENST00000338862 SETD1BQ9UPS6 1966 aaKnown RBP16.6■□□□□ 0.25
PCDH8-201ENST00000338862 FLT4P35916 1363 aa16.6■□□□□ 0.25
PCDH8-201ENST00000338862 TTC14Q96N46 770 aa16.59■□□□□ 0.25
PCDH8-201ENST00000338862 ZSWIM4Q9H7M6 989 aa16.59■□□□□ 0.25
PCDH8-201ENST00000338862 UHRF1BP1LA0JNW5 1464 aa16.59■□□□□ 0.25
PCDH8-201ENST00000338862 ADGRB2O60241 1585 aa16.59■□□□□ 0.25
PCDH8-201ENST00000338862 LTKP29376 864 aa16.59■□□□□ 0.25
PCDH8-201ENST00000338862 ELF2Q15723 593 aa16.59■□□□□ 0.25
PCDH8-201ENST00000338862 CEP57L1Q8IYX8 460 aa16.59■□□□□ 0.25
PCDH8-201ENST00000338862 CHMP4CQ96CF2 233 aa16.59■□□□□ 0.25
PCDH8-201ENST00000338862 SETBP1Q9Y6X0 1596 aa16.59■□□□□ 0.25
PCDH8-201ENST00000338862 GRM8O00222 908 aa16.58■□□□□ 0.25
PCDH8-201ENST00000338862 LMOD1P29536 600 aaPredicted RBP16.58■□□□□ 0.25
PCDH8-201ENST00000338862 TPM4P67936 248 aa16.58■□□□□ 0.25
PCDH8-201ENST00000338862 BEND3Q5T5X7 828 aa16.58■□□□□ 0.25
PCDH8-201ENST00000338862 NPHP3Q7Z494 1330 aa16.58■□□□□ 0.25
PCDH8-201ENST00000338862 GTF3C6Q969F1 213 aa16.58■□□□□ 0.25
PCDH8-201ENST00000338862 HIP1O00291 1037 aa16.58■□□□□ 0.24
PCDH8-201ENST00000338862 SERPINC1P01008 464 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms