RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CCT2P78371 535 aaKnown RBP17.57■□□□□ 0.4
C9orf47-201ENST00000334490 LARP6Q9BRS8 491 aaKnown RBP17.57■□□□□ 0.4
C9orf47-201ENST00000334490 CABP5Q9NP86 173 aa17.57■□□□□ 0.4
C9orf47-201ENST00000334490 MFSD6Q6ZSS7 791 aa17.57■□□□□ 0.4
C9orf47-201ENST00000334490 GSTO1P78417 241 aa17.57■□□□□ 0.4
C9orf47-201ENST00000334490 GUCY1B3Q02153 619 aa17.57■□□□□ 0.4
C9orf47-201ENST00000334490 TMEM94Q12767 1356 aa17.57■□□□□ 0.4
C9orf47-201ENST00000334490 PDE1AP54750 535 aa17.56■□□□□ 0.4
C9orf47-201ENST00000334490 NUCB1Q02818 461 aa17.56■□□□□ 0.4
C9orf47-201ENST00000334490 MYO5CQ9NQX4 1742 aa17.56■□□□□ 0.4
C9orf47-201ENST00000334490 OGFOD1Q8N543 542 aa17.56■□□□□ 0.4
C9orf47-201ENST00000334490 ARHGEF5Q12774 1597 aa17.56■□□□□ 0.4
C9orf47-201ENST00000334490 ZFYP08048 801 aaPredicted RBP17.56■□□□□ 0.4
C9orf47-201ENST00000334490 TMEM67Q5HYA8 995 aa17.56■□□□□ 0.4
C9orf47-201ENST00000334490 CEP131Q9UPN4 1083 aa17.56■□□□□ 0.4
C9orf47-201ENST00000334490 NPC1L1Q9UHC9 1359 aa17.56■□□□□ 0.4
C9orf47-201ENST00000334490 ZGPATQ8N5A5 531 aaKnown RBP17.55■□□□□ 0.4
C9orf47-201ENST00000334490 CFAP74Q9C0B2 1584 aa17.55■□□□□ 0.4
C9orf47-201ENST00000334490 DACH1Q9UI36 760 aa17.55■□□□□ 0.4
C9orf47-201ENST00000334490 SERPINC1P01008 464 aa17.55■□□□□ 0.4
C9orf47-201ENST00000334490 HMGN5P82970 282 aaKnown RBP17.55■□□□□ 0.4
C9orf47-201ENST00000334490 SDSP20132 328 aa17.54■□□□□ 0.4
C9orf47-201ENST00000334490 FAM89AQ96GI7 184 aa17.54■□□□□ 0.4
C9orf47-201ENST00000334490 PTPRTO14522 1441 aa17.54■□□□□ 0.4
C9orf47-201ENST00000334490 SLC9C2Q5TAH2 1124 aa17.54■□□□□ 0.4
C9orf47-201ENST00000334490 NAA16Q6N069 864 aaPredicted RBP17.54■□□□□ 0.4
C9orf47-201ENST00000334490 NEK1Q96PY6 1258 aa17.54■□□□□ 0.4
C9orf47-201ENST00000334490 SLC52A2Q9HAB3 445 aa17.54■□□□□ 0.4
C9orf47-201ENST00000334490 SOS1Q07889 1333 aaPredicted RBP17.54■□□□□ 0.4
C9orf47-201ENST00000334490 G2E3Q7L622 706 aa17.54■□□□□ 0.4
C9orf47-201ENST00000334490 NCOA7Q8NI08 942 aa17.54■□□□□ 0.4
C9orf47-201ENST00000334490 STX8Q9UNK0 236 aa17.54■□□□□ 0.4
C9orf47-201ENST00000334490 RLBP1P12271 317 aa17.54■□□□□ 0.4
C9orf47-201ENST00000334490 MICU3Q86XE3 530 aa17.54■□□□□ 0.4
C9orf47-201ENST00000334490 CEP57L1Q8IYX8 460 aa17.54■□□□□ 0.4
C9orf47-201ENST00000334490 A1BGP04217 495 aa17.53■□□□□ 0.4
C9orf47-201ENST00000334490 TTLL5Q6EMB2 1281 aa17.53■□□□□ 0.4
C9orf47-201ENST00000334490 ZNF804AQ7Z570 1209 aa17.53■□□□□ 0.4
C9orf47-201ENST00000334490 USP16Q9Y5T5 823 aa17.53■□□□□ 0.4
C9orf47-201ENST00000334490 SSRP1Q08945 709 aaKnown RBP17.53■□□□□ 0.4
C9orf47-201ENST00000334490 TANGO6Q9C0B7 1094 aa17.53■□□□□ 0.4
C9orf47-201ENST00000334490 VAT1LQ9HCJ6 419 aa17.53■□□□□ 0.4
C9orf47-201ENST00000334490 HDAC9Q9UKV0 1011 aa17.53■□□□□ 0.4
C9orf47-201ENST00000334490 CCDC144CPQ8IYA2 1237 aa17.53■□□□□ 0.4
C9orf47-201ENST00000334490 BABAM1Q9NWV8 329 aa17.53■□□□□ 0.4
C9orf47-201ENST00000334490 METP08581 1390 aa17.53■□□□□ 0.4
C9orf47-201ENST00000334490 MLH3Q9UHC1 1453 aa17.53■□□□□ 0.4
C9orf47-201ENST00000334490 NLRP5P59047 1200 aa17.53■□□□□ 0.4
C9orf47-201ENST00000334490 TNIP1Q15025 636 aa17.53■□□□□ 0.4
C9orf47-201ENST00000334490 NUP62CLQ9H1M0 184 aa17.53■□□□□ 0.4
C9orf47-201ENST00000334490 MAGI2Q86UL8 1455 aa17.52■□□□□ 0.4
C9orf47-201ENST00000334490 CCDC194A0A1B0GVG4 234 aa17.52■□□□□ 0.4
C9orf47-201ENST00000334490 SMARCE1Q969G3 411 aa17.52■□□□□ 0.4
C9orf47-201ENST00000334490 KAT14Q9H8E8 782 aa17.52■□□□□ 0.4
C9orf47-201ENST00000334490 STK32BQ9NY57 414 aa17.52■□□□□ 0.4
C9orf47-201ENST00000334490 SYCP1Q15431 976 aa17.52■□□□□ 0.4
C9orf47-201ENST00000334490 CUL5Q93034 780 aa17.52■□□□□ 0.4
C9orf47-201ENST00000334490 HMG20BQ9P0W2 317 aa17.52■□□□□ 0.4
C9orf47-201ENST00000334490 KIF5BP33176 963 aa17.52■□□□□ 0.39
C9orf47-201ENST00000334490 CEP85Q6P2H3 762 aa17.52■□□□□ 0.39
C9orf47-201ENST00000334490 DNAJC10Q8IXB1 793 aa17.52■□□□□ 0.39
C9orf47-201ENST00000334490 CNBD1Q8NA66 436 aa17.52■□□□□ 0.39
C9orf47-201ENST00000334490 PLBD2Q8NHP8 589 aa17.52■□□□□ 0.39
C9orf47-201ENST00000334490 SLC4A4Q9Y6R1 1079 aa17.52■□□□□ 0.39
C9orf47-201ENST00000334490 IARSP41252 1262 aaKnown RBP17.51■□□□□ 0.39
C9orf47-201ENST00000334490 CHL1O00533 1208 aa17.51■□□□□ 0.39
C9orf47-201ENST00000334490 RAB11FIP4Q86YS3 637 aa17.51■□□□□ 0.39
C9orf47-201ENST00000334490 C16orf71Q8IYS4 520 aaPredicted RBP17.51■□□□□ 0.39
C9orf47-201ENST00000334490 SH3TC1Q8TE82 1336 aa17.51■□□□□ 0.39
C9orf47-201ENST00000334490 PDCL3Q9H2J4 239 aa17.51■□□□□ 0.39
C9orf47-201ENST00000334490 MCM4P33991 863 aa17.51■□□□□ 0.39
C9orf47-201ENST00000334490 BICC1Q9H694 974 aaKnown RBP17.5■□□□□ 0.39
C9orf47-201ENST00000334490 HOXB7P09629 217 aa17.5■□□□□ 0.39
C9orf47-201ENST00000334490 ZNF496Q96IT1 587 aaPredicted RBP17.5■□□□□ 0.39
C9orf47-201ENST00000334490 TSPOAP1O95153 1857 aa17.5■□□□□ 0.39
C9orf47-201ENST00000334490 DHX8Q14562 1220 aaKnown RBP17.5■□□□□ 0.39
C9orf47-201ENST00000334490 PARP10Q53GL7 1025 aa17.5■□□□□ 0.39
C9orf47-201ENST00000334490 JDP2Q8WYK2 163 aa17.5■□□□□ 0.39
C9orf47-201ENST00000334490 PLEKHG1Q9ULL1 1385 aa17.5■□□□□ 0.39
C9orf47-201ENST00000334490 EFCAB6Q5THR3 1501 aa17.5■□□□□ 0.39
C9orf47-201ENST00000334490 CHD1O14646 1710 aa17.5■□□□□ 0.39
C9orf47-201ENST00000334490 HCLS1P14317 486 aaPredicted RBP17.5■□□□□ 0.39
C9orf47-201ENST00000334490 CHMP4BP1P59074 171 aa17.5■□□□□ 0.39
C9orf47-201ENST00000334490 CCDC39Q9UFE4 941 aa17.5■□□□□ 0.39
C9orf47-201ENST00000334490 RIMBP2O15034 1052 aa17.49■□□□□ 0.39
C9orf47-201ENST00000334490 PPFIA3O75145 1194 aa17.49■□□□□ 0.39
C9orf47-201ENST00000334490 ZNHIT6Q9NWK9 470 aaKnown RBP17.49■□□□□ 0.39
C9orf47-201ENST00000334490 MCM5P33992 734 aa17.49■□□□□ 0.39
C9orf47-201ENST00000334490 TFCP2Q12800 502 aa17.49■□□□□ 0.39
C9orf47-201ENST00000334490 SCAND2PQ9GZW5 306 aaPredicted RBP17.49■□□□□ 0.39
C9orf47-201ENST00000334490 PAG1Q9NWQ8 432 aa17.49■□□□□ 0.39
C9orf47-201ENST00000334490 NPHP4O75161 1426 aaPredicted RBP17.49■□□□□ 0.39
C9orf47-201ENST00000334490 MCMDC2Q4G0Z9 681 aa17.49■□□□□ 0.39
C9orf47-201ENST00000334490 MNS1Q8NEH6 495 aa17.49■□□□□ 0.39
C9orf47-201ENST00000334490 DCTPP1Q9H773 170 aa17.49■□□□□ 0.39
C9orf47-201ENST00000334490 PICALMQ13492 652 aa17.49■□□□□ 0.39
C9orf47-201ENST00000334490 METTL22Q9BUU2 404 aaPredicted RBP17.49■□□□□ 0.39
C9orf47-201ENST00000334490 ANKRD2Q9GZV1 360 aa17.49■□□□□ 0.39
C9orf47-201ENST00000334490 ORC3Q9UBD5 711 aaPredicted RBP17.49■□□□□ 0.39
C9orf47-201ENST00000334490 SAMD9LQ8IVG5 1584 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms