RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 ANAPC15P60006 121 aa22.91■■□□□ 1.26
LAMP1-201ENST00000332556 NMIQ13287 307 aaPredicted RBP22.91■■□□□ 1.26
LAMP1-201ENST00000332556 GCKRQ14397 625 aa22.91■■□□□ 1.26
LAMP1-201ENST00000332556 MPNDQ8N594 471 aa22.91■■□□□ 1.26
LAMP1-201ENST00000332556 BRD1O95696 1058 aa22.9■■□□□ 1.26
LAMP1-201ENST00000332556 SLFNL1Q499Z3 407 aa22.9■■□□□ 1.26
LAMP1-201ENST00000332556 ANKRD13DQ6ZTN6 518 aa22.9■■□□□ 1.26
LAMP1-201ENST00000332556 ZNF330Q9Y3S2 320 aaPredicted RBP22.9■■□□□ 1.26
LAMP1-201ENST00000332556 C5P01031 1676 aa22.89■■□□□ 1.26
LAMP1-201ENST00000332556 KCNJ4P48050 445 aa22.89■■□□□ 1.26
LAMP1-201ENST00000332556 CABP4P57796 275 aa22.89■■□□□ 1.26
LAMP1-201ENST00000332556 NEXNQ0ZGT2 675 aa22.89■■□□□ 1.26
LAMP1-201ENST00000332556 NECAB1Q8N987 351 aa22.89■■□□□ 1.26
LAMP1-201ENST00000332556 MST1RQ04912 1400 aa22.89■■□□□ 1.26
LAMP1-201ENST00000332556 NCAPD2Q15021 1401 aa22.89■■□□□ 1.25
LAMP1-201ENST00000332556 A0A0D9SFI3 127 aa22.89■■□□□ 1.25
LAMP1-201ENST00000332556 CCDC83Q8IWF9 413 aa22.89■■□□□ 1.25
LAMP1-201ENST00000332556 HS1BP3Q53T59 392 aa22.88■■□□□ 1.25
LAMP1-201ENST00000332556 LARP1Q6PKG0 1096 aaKnown RBP22.88■■□□□ 1.25
LAMP1-201ENST00000332556 ZKSCAN5Q9Y2L8 839 aa22.88■■□□□ 1.25
LAMP1-201ENST00000332556 FSD1Q9BTV5 496 aa22.87■■□□□ 1.25
LAMP1-201ENST00000332556 ZNF500O60304 480 aaPredicted RBP22.87■■□□□ 1.25
LAMP1-201ENST00000332556 TTC14Q96N46 770 aa22.87■■□□□ 1.25
LAMP1-201ENST00000332556 TTC41PQ6P2S7 1318 aa22.87■■□□□ 1.25
LAMP1-201ENST00000332556 PHRF1Q9P1Y6 1649 aaKnown RBP22.86■■□□□ 1.25
LAMP1-201ENST00000332556 UQCRHLA0A096LP55 91 aa22.86■■□□□ 1.25
LAMP1-201ENST00000332556 UQCRHP07919 91 aa22.86■■□□□ 1.25
LAMP1-201ENST00000332556 TFCP2Q12800 502 aa22.86■■□□□ 1.25
LAMP1-201ENST00000332556 STRN4Q9NRL3 753 aa22.86■■□□□ 1.25
LAMP1-201ENST00000332556 ZNF589Q86UQ0 364 aaPredicted RBP22.86■■□□□ 1.25
LAMP1-201ENST00000332556 METTL22Q9BUU2 404 aaPredicted RBP22.86■■□□□ 1.25
LAMP1-201ENST00000332556 A0A087WZG4 1122 aa22.85■■□□□ 1.25
LAMP1-201ENST00000332556 MCM2P49736 904 aa22.85■■□□□ 1.25
LAMP1-201ENST00000332556 A1BGP04217 495 aa22.85■■□□□ 1.25
LAMP1-201ENST00000332556 CCDC129Q6ZRS4 1044 aa22.85■■□□□ 1.25
LAMP1-201ENST00000332556 TTLL7Q6ZT98 887 aa22.85■■□□□ 1.25
LAMP1-201ENST00000332556 LRP10Q7Z4F1 713 aa22.85■■□□□ 1.25
LAMP1-201ENST00000332556 RBM8AQ9Y5S9 174 aaKnown RBP22.85■■□□□ 1.25
LAMP1-201ENST00000332556 SNRPA1P09661 255 aaKnown RBP22.85■■□□□ 1.25
LAMP1-201ENST00000332556 TOM1L2Q6ZVM7 507 aa22.85■■□□□ 1.25
LAMP1-201ENST00000332556 GPATCH3Q96I76 525 aa22.85■■□□□ 1.25
LAMP1-201ENST00000332556 DNAJC2Q99543 621 aaKnown RBP22.85■■□□□ 1.25
LAMP1-201ENST00000332556 CNPY2Q9Y2B0 182 aa22.85■■□□□ 1.25
LAMP1-201ENST00000332556 CCDC85AQ96PX6 553 aaPredicted RBP22.84■■□□□ 1.25
LAMP1-201ENST00000332556 SEC62Q99442 399 aaKnown RBP22.84■■□□□ 1.25
LAMP1-201ENST00000332556 CHMP4AQ9BY43 222 aa22.84■■□□□ 1.25
LAMP1-201ENST00000332556 ZBTB3Q9H5J0 574 aa22.84■■□□□ 1.25
LAMP1-201ENST00000332556 TCHHQ07283 1943 aa22.84■■□□□ 1.25
LAMP1-201ENST00000332556 RPAP1Q9BWH6 1393 aaPredicted RBP22.84■■□□□ 1.25
LAMP1-201ENST00000332556 STRCP1A6NGW2 1772 aa22.84■■□□□ 1.25
LAMP1-201ENST00000332556 USP48Q86UV5 1035 aa22.83■■□□□ 1.25
LAMP1-201ENST00000332556 ERC1Q8IUD2 1116 aa22.83■■□□□ 1.24
LAMP1-201ENST00000332556 EVI5LQ96CN4 794 aa22.83■■□□□ 1.24
LAMP1-201ENST00000332556 PRDM11Q9NQV5 511 aa22.83■■□□□ 1.24
LAMP1-201ENST00000332556 PDRG1Q9NUG6 133 aa22.83■■□□□ 1.24
LAMP1-201ENST00000332556 SIPA1L3O60292 1781 aaPredicted RBP22.83■■□□□ 1.24
LAMP1-201ENST00000332556 USP42Q9H9J4 1324 aaKnown RBP22.82■■□□□ 1.24
LAMP1-201ENST00000332556 NBPF26B4DH59 902 aa22.82■■□□□ 1.24
LAMP1-201ENST00000332556 NBPF14Q5TI25 921 aa22.82■■□□□ 1.24
LAMP1-201ENST00000332556 NBPF10Q6P3W6 841 aaKnown RBP22.82■■□□□ 1.24
LAMP1-201ENST00000332556 NBPF15Q8N660 670 aa22.82■■□□□ 1.24
LAMP1-201ENST00000332556 DCAF5Q96JK2 942 aa22.82■■□□□ 1.24
LAMP1-201ENST00000332556 FMNL2Q96PY5 1086 aa22.82■■□□□ 1.24
LAMP1-201ENST00000332556 DBNLQ9UJU6 430 aaKnown RBP22.82■■□□□ 1.24
LAMP1-201ENST00000332556 PTMAP06454 111 aaKnown RBP22.82■■□□□ 1.24
LAMP1-201ENST00000332556 STK3Q13188 491 aa22.81■■□□□ 1.24
LAMP1-201ENST00000332556 DBNDD2Q9BQY9 259 aa22.81■■□□□ 1.24
LAMP1-201ENST00000332556 CCDC171Q6TFL3 1326 aa22.81■■□□□ 1.24
LAMP1-201ENST00000332556 MBD3O95983 291 aa22.81■■□□□ 1.24
LAMP1-201ENST00000332556 SYT1P21579 422 aa22.81■■□□□ 1.24
LAMP1-201ENST00000332556 PTPN12Q05209 780 aaKnown RBP22.81■■□□□ 1.24
LAMP1-201ENST00000332556 ST3GAL1Q11201 340 aa22.81■■□□□ 1.24
LAMP1-201ENST00000332556 ZNF594Q96JF6 807 aaPredicted RBP22.81■■□□□ 1.24
LAMP1-201ENST00000332556 LIMCH1Q9UPQ0 1083 aa22.81■■□□□ 1.24
LAMP1-201ENST00000332556 ALS2Q96Q42 1657 aa22.81■■□□□ 1.24
LAMP1-201ENST00000332556 CREB3L3Q68CJ9 461 aa22.8■■□□□ 1.24
LAMP1-201ENST00000332556 LMBR1LQ6UX01 489 aa22.8■■□□□ 1.24
LAMP1-201ENST00000332556 INTS4Q96HW7 963 aaKnown RBP22.8■■□□□ 1.24
LAMP1-201ENST00000332556 CCDC39Q9UFE4 941 aa22.8■■□□□ 1.24
LAMP1-201ENST00000332556 UTYO14607 1347 aa22.8■■□□□ 1.24
LAMP1-201ENST00000332556 FIBPO43427 364 aa22.8■■□□□ 1.24
LAMP1-201ENST00000332556 DDX46Q7L014 1031 aaKnown RBP22.8■■□□□ 1.24
LAMP1-201ENST00000332556 ME3Q16798 604 aa22.79■■□□□ 1.24
LAMP1-201ENST00000332556 FAM173BQ6P4H8 233 aa22.79■■□□□ 1.24
LAMP1-201ENST00000332556 RUFY2Q8WXA3 655 aa22.79■■□□□ 1.24
LAMP1-201ENST00000332556 TSPY26PQ9H489 355 aa22.79■■□□□ 1.24
LAMP1-201ENST00000332556 SMC3Q9UQE7 1217 aa22.79■■□□□ 1.24
LAMP1-201ENST00000332556 PPFIA3O75145 1194 aa22.79■■□□□ 1.24
LAMP1-201ENST00000332556 GJB2P29033 226 aa22.79■■□□□ 1.24
LAMP1-201ENST00000332556 SPATA31A3Q5VYP0 1347 aa22.79■■□□□ 1.24
LAMP1-201ENST00000332556 NECTIN1Q15223 517 aa22.78■■□□□ 1.24
LAMP1-201ENST00000332556 BRINP3Q76B58 766 aa22.78■■□□□ 1.24
LAMP1-201ENST00000332556 CADPS2Q86UW7 1296 aa22.78■■□□□ 1.24
LAMP1-201ENST00000332556 FERMT3Q86UX7 667 aa22.78■■□□□ 1.24
LAMP1-201ENST00000332556 ZNF830Q96NB3 372 aaPredicted RBP22.78■■□□□ 1.24
LAMP1-201ENST00000332556 NEUROD6Q96NK8 337 aa22.78■■□□□ 1.24
LAMP1-201ENST00000332556 VPS37CA5D8V6 355 aaPredicted RBP22.77■■□□□ 1.24
LAMP1-201ENST00000332556 RFX5P48382 616 aaPredicted RBP22.77■■□□□ 1.24
LAMP1-201ENST00000332556 TERF1P54274 439 aa22.77■■□□□ 1.24
LAMP1-201ENST00000332556 TPCN1Q9ULQ1 816 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms