RNA–Protein interactions for RNA: ENST00000332440.3

LINC00313-201, long intergenic non-protein coding RNA 313, humanhuman

TSL 1 (best) BASIC

Gene LINC00313, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00313-201ENST00000332440 ZNF853P0CG23 659 aa21.33■■□□□ 1.01
LINC00313-201ENST00000332440 ZNF541Q9H0D2 1346 aa21.32■■□□□ 1
LINC00313-201ENST00000332440 DDNO94850 711 aaPredicted RBP21.32■■□□□ 1
LINC00313-201ENST00000332440 WDR43Q15061 677 aaKnown RBP eCLIP21.32■■□□□ 1
LINC00313-201ENST00000332440 SLC10A5Q5PT55 438 aa21.32■■□□□ 1
LINC00313-201ENST00000332440 L3MBTL3Q96JM7 780 aaPredicted RBP21.32■■□□□ 1
LINC00313-201ENST00000332440 ZNF277Q9NRM2 450 aaPredicted RBP21.32■■□□□ 1
LINC00313-201ENST00000332440 ALDH1B1P30837 517 aa21.31■■□□□ 1
LINC00313-201ENST00000332440 PARP10Q53GL7 1025 aa21.31■■□□□ 1
LINC00313-201ENST00000332440 COPS6Q7L5N1 327 aa21.31■■□□□ 1
LINC00313-201ENST00000332440 XAGE3Q8WTP9 111 aa21.31■■□□□ 1
LINC00313-201ENST00000332440 PSMD1Q99460 953 aa21.31■■□□□ 1
LINC00313-201ENST00000332440 DDX21Q9NR30 783 aaKnown RBP eCLIP21.31■■□□□ 1
LINC00313-201ENST00000332440 LTBP1Q14766 1721 aa21.31■■□□□ 1
LINC00313-201ENST00000332440 COL4A1P02462 1669 aa21.31■■□□□ 1
LINC00313-201ENST00000332440 HOXB7P09629 217 aa21.3■■□□□ 1
LINC00313-201ENST00000332440 POTEIP0CG38 1075 aa21.3■■□□□ 1
LINC00313-201ENST00000332440 POTEJP0CG39 1038 aa21.3■■□□□ 1
LINC00313-201ENST00000332440 RTKN2Q8IZC4 609 aa21.3■■□□□ 1
LINC00313-201ENST00000332440 NECTIN2Q92692 538 aa21.3■■□□□ 1
LINC00313-201ENST00000332440 CFAP44Q96MT7 982 aa21.3■■□□□ 1
LINC00313-201ENST00000332440 LRRC37AA6NMS7 1700 aa21.29■■□□□ 1
LINC00313-201ENST00000332440 GTF2E1P29083 439 aaPredicted RBP21.29■■□□□ 1
LINC00313-201ENST00000332440 DPY19L2Q6NUT2 758 aa21.29■■□□□ 1
LINC00313-201ENST00000332440 NLRP10Q86W26 655 aa21.29■■□□□ 1
LINC00313-201ENST00000332440 CRAMP1Q96RY5 1269 aa21.29■■□□□ 1
LINC00313-201ENST00000332440 CHPF2Q9P2E5 772 aa21.29■■□□□ 1
LINC00313-201ENST00000332440 RNF123Q5XPI4 1314 aa21.29■■□□□ 1
LINC00313-201ENST00000332440 FZD9O00144 591 aa21.28■■□□□ 1
LINC00313-201ENST00000332440 JMYQ8N9B5 988 aa21.28■■□□□ 1
LINC00313-201ENST00000332440 KLRG1Q96E93 195 aa21.28■■□□□ 1
LINC00313-201ENST00000332440 MBIPQ9NS73 344 aa21.28■■□□□ 1
LINC00313-201ENST00000332440 DUOX1Q9NRD9 1551 aa21.27■■□□□ 1
LINC00313-201ENST00000332440 TAF1P21675 1872 aa21.27■■□□□ 1
LINC00313-201ENST00000332440 IARSP41252 1262 aaKnown RBP21.27■■□□□ 1
LINC00313-201ENST00000332440 CCDC184Q52MB2 194 aa21.27■■□□□ 1
LINC00313-201ENST00000332440 SYNE4Q8N205 404 aa21.27■■□□□ 1
LINC00313-201ENST00000332440 TCIRG1Q13488 830 aa21.26■□□□□ 0.99
LINC00313-201ENST00000332440 PPP1R42Q7Z4L9 355 aa21.26■□□□□ 0.99
LINC00313-201ENST00000332440 UTP14AQ9BVJ6 771 aaKnown RBP21.26■□□□□ 0.99
LINC00313-201ENST00000332440 APAF1O14727 1248 aa21.25■□□□□ 0.99
LINC00313-201ENST00000332440 ABCC4O15439 1325 aa21.25■□□□□ 0.99
LINC00313-201ENST00000332440 AIMP1Q12904 312 aaKnown RBP21.24■□□□□ 0.99
LINC00313-201ENST00000332440 HDGFL1Q5TGJ6 251 aa21.24■□□□□ 0.99
LINC00313-201ENST00000332440 CC2D2BQ6DHV5 1058 aa21.24■□□□□ 0.99
LINC00313-201ENST00000332440 RPGRQ92834 1020 aaKnown RBP21.24■□□□□ 0.99
LINC00313-201ENST00000332440 LAS1LQ9Y4W2 734 aaKnown RBP21.24■□□□□ 0.99
LINC00313-201ENST00000332440 PPEF1O14829 653 aaPredicted RBP21.23■□□□□ 0.99
LINC00313-201ENST00000332440 HSP90AB3PQ58FF7 597 aa21.23■□□□□ 0.99
LINC00313-201ENST00000332440 DUSP27Q5VZP5 1158 aa21.23■□□□□ 0.99
LINC00313-201ENST00000332440 RBM17Q96I25 401 aaKnown RBP21.23■□□□□ 0.99
LINC00313-201ENST00000332440 ISCA1Q9BUE6 129 aa21.23■□□□□ 0.99
LINC00313-201ENST00000332440 TAF1DQ9H5J8 278 aaPredicted RBP21.23■□□□□ 0.99
LINC00313-201ENST00000332440 IFT57Q9NWB7 429 aa21.23■□□□□ 0.99
LINC00313-201ENST00000332440 PLBD2Q8NHP8 589 aa21.22■□□□□ 0.99
LINC00313-201ENST00000332440 PASKQ96RG2 1323 aa21.22■□□□□ 0.99
LINC00313-201ENST00000332440 CHADLQ6NUI6 762 aa21.21■□□□□ 0.99
LINC00313-201ENST00000332440 NLRP3Q96P20 1036 aa21.21■□□□□ 0.99
LINC00313-201ENST00000332440 DBF4Q9UBU7 674 aaPredicted RBP21.21■□□□□ 0.99
LINC00313-201ENST00000332440 ATP6V0A2Q9Y487 856 aa21.21■□□□□ 0.99
LINC00313-201ENST00000332440 HCLS1P14317 486 aaPredicted RBP21.2■□□□□ 0.98
LINC00313-201ENST00000332440 RTFDC1Q9BY42 306 aaPredicted RBP21.2■□□□□ 0.98
LINC00313-201ENST00000332440 IQCA1LA6NCM1 817 aa21.19■□□□□ 0.98
LINC00313-201ENST00000332440 GRIPAP1Q4V328 841 aa21.19■□□□□ 0.98
LINC00313-201ENST00000332440 SH3TC1Q8TE82 1336 aa21.19■□□□□ 0.98
LINC00313-201ENST00000332440 ANKRD13DQ6ZTN6 518 aa21.18■□□□□ 0.98
LINC00313-201ENST00000332440 GPC2Q8N158 579 aa21.18■□□□□ 0.98
LINC00313-201ENST00000332440 ITGBL1O95965 494 aaPredicted RBP21.17■□□□□ 0.98
LINC00313-201ENST00000332440 LDHDQ86WU2 507 aa21.17■□□□□ 0.98
LINC00313-201ENST00000332440 C8orf58Q8NAV2 365 aa21.17■□□□□ 0.98
LINC00313-201ENST00000332440 HYPKQ9NX55 129 aa21.17■□□□□ 0.98
LINC00313-201ENST00000332440 TRMT112Q9UI30 125 aaKnown RBP21.17■□□□□ 0.98
LINC00313-201ENST00000332440 GNAI1P63096 354 aa21.16■□□□□ 0.98
LINC00313-201ENST00000332440 TRIM28Q13263 835 aaKnown RBP21.16■□□□□ 0.98
LINC00313-201ENST00000332440 ZNF428Q96B54 188 aa21.16■□□□□ 0.98
LINC00313-201ENST00000332440 HACL1Q9UJ83 578 aa21.16■□□□□ 0.98
LINC00313-201ENST00000332440 TCERG1O14776 1098 aaKnown RBP21.15■□□□□ 0.98
LINC00313-201ENST00000332440 SCNN1DP51172 638 aa21.15■□□□□ 0.98
LINC00313-201ENST00000332440 IFFO2Q5TF58 517 aa21.15■□□□□ 0.98
LINC00313-201ENST00000332440 PHAXQ9H814 394 aaKnown RBP21.15■□□□□ 0.98
LINC00313-201ENST00000332440 ATP5J2-PTCD1G3V325 749 aa21.14■□□□□ 0.97
LINC00313-201ENST00000332440 EPHX2P34913 555 aa21.14■□□□□ 0.97
LINC00313-201ENST00000332440 GRAPQ13588 217 aa21.14■□□□□ 0.97
LINC00313-201ENST00000332440 SP8Q8IXZ3 490 aa21.14■□□□□ 0.97
LINC00313-201ENST00000332440 GRAPLQ8TC17 118 aaPredicted RBP21.14■□□□□ 0.97
LINC00313-201ENST00000332440 BBOX1O75936 387 aa21.13■□□□□ 0.97
LINC00313-201ENST00000332440 SF3B3Q15393 1217 aaKnown RBP21.13■□□□□ 0.97
LINC00313-201ENST00000332440 CCDC27Q2M243 656 aa21.13■□□□□ 0.97
LINC00313-201ENST00000332440 TSPYL6Q8N831 410 aa21.13■□□□□ 0.97
LINC00313-201ENST00000332440 JDP2Q8WYK2 163 aa21.13■□□□□ 0.97
LINC00313-201ENST00000332440 FAM89AQ96GI7 184 aa21.13■□□□□ 0.97
LINC00313-201ENST00000332440 CREBZFQ9NS37 354 aa21.13■□□□□ 0.97
LINC00313-201ENST00000332440 AOC3Q16853 763 aa21.12■□□□□ 0.97
LINC00313-201ENST00000332440 LARGE2Q8N3Y3 721 aa21.12■□□□□ 0.97
LINC00313-201ENST00000332440 VPS33BQ9H267 617 aa21.12■□□□□ 0.97
LINC00313-201ENST00000332440 CALD1Q05682 793 aaKnown RBP21.11■□□□□ 0.97
LINC00313-201ENST00000332440 ELL2O00472 640 aaPredicted RBP21.1■□□□□ 0.97
LINC00313-201ENST00000332440 PPIP5K2O43314 1243 aa21.1■□□□□ 0.97
LINC00313-201ENST00000332440 KIAA2012Q0VF49 1180 aa21.1■□□□□ 0.97
LINC00313-201ENST00000332440 CELF1Q92879 486 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms