RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 ST5P78524 1137 aa26.73■■□□□ 1.87
YBX1-202ENST00000332220 ERFEQ4G0M1 354 aa26.73■■□□□ 1.87
YBX1-202ENST00000332220 PPP1R42Q7Z4L9 355 aa26.73■■□□□ 1.87
YBX1-202ENST00000332220 A0A0G2JLW4 131 aa26.72■■□□□ 1.87
YBX1-202ENST00000332220 F6X3S4 739 aa26.72■■□□□ 1.87
YBX1-202ENST00000332220 DPEP1P16444 411 aa26.72■■□□□ 1.87
YBX1-202ENST00000332220 TGFB2P61812 414 aa26.72■■□□□ 1.87
YBX1-202ENST00000332220 TRIM28Q13263 835 aaKnown RBP26.72■■□□□ 1.87
YBX1-202ENST00000332220 DNAAF4Q8WXU2 420 aa26.72■■□□□ 1.87
YBX1-202ENST00000332220 UTP14AQ9BVJ6 771 aaKnown RBP26.72■■□□□ 1.87
YBX1-202ENST00000332220 IGKV5-2P06315 115 aa26.71■■□□□ 1.87
YBX1-202ENST00000332220 GTF2E1P29083 439 aaPredicted RBP26.71■■□□□ 1.87
YBX1-202ENST00000332220 CHRNA5P30532 468 aa26.71■■□□□ 1.87
YBX1-202ENST00000332220 BRIP1Q9BX63 1249 aa26.71■■□□□ 1.87
YBX1-202ENST00000332220 TAF1P21675 1872 aa26.7■■□□□ 1.87
YBX1-202ENST00000332220 SYNE4Q8N205 404 aa26.7■■□□□ 1.86
YBX1-202ENST00000332220 RIC1Q4ADV7 1423 aa26.7■■□□□ 1.86
YBX1-202ENST00000332220 KCNA3P22001 575 aa26.69■■□□□ 1.86
YBX1-202ENST00000332220 TRMT112Q9UI30 125 aaKnown RBP26.69■■□□□ 1.86
YBX1-202ENST00000332220 SLX4Q8IY92 1834 aa26.68■■□□□ 1.86
YBX1-202ENST00000332220 CWF19L2Q2TBE0 894 aaKnown RBP26.68■■□□□ 1.86
YBX1-202ENST00000332220 WWC3Q9ULE0 1092 aa26.68■■□□□ 1.86
YBX1-202ENST00000332220 PTPRCP08575 1304 aa26.67■■□□□ 1.86
YBX1-202ENST00000332220 RNF123Q5XPI4 1314 aa26.67■■□□□ 1.86
YBX1-202ENST00000332220 BRPF1P55201 1214 aaPredicted RBP26.67■■□□□ 1.86
YBX1-202ENST00000332220 NEXNQ0ZGT2 675 aa26.67■■□□□ 1.86
YBX1-202ENST00000332220 C2CD5Q86YS7 1000 aa26.67■■□□□ 1.86
YBX1-202ENST00000332220 CCDC191Q8NCU4 936 aa26.67■■□□□ 1.86
YBX1-202ENST00000332220 NEURL1BA8MQ27 555 aa26.66■■□□□ 1.86
YBX1-202ENST00000332220 BCAR3O75815 825 aa26.66■■□□□ 1.86
YBX1-202ENST00000332220 PDE6BP35913 854 aa26.66■■□□□ 1.86
YBX1-202ENST00000332220 CWC25Q9NXE8 425 aaPredicted RBP26.66■■□□□ 1.86
YBX1-202ENST00000332220 SH3TC1Q8TE82 1336 aa26.65■■□□□ 1.86
YBX1-202ENST00000332220 GOLGB1Q14789 3259 aaKnown RBP26.65■■□□□ 1.86
YBX1-202ENST00000332220 RTL5Q5HYW3 569 aaPredicted RBP26.65■■□□□ 1.86
YBX1-202ENST00000332220 FAM89AQ96GI7 184 aa26.65■■□□□ 1.86
YBX1-202ENST00000332220 NOB1Q9ULX3 412 aaKnown RBP26.65■■□□□ 1.86
YBX1-202ENST00000332220 SLC10A5Q5PT55 438 aa26.64■■□□□ 1.86
YBX1-202ENST00000332220 BEND3Q5T5X7 828 aa26.64■■□□□ 1.86
YBX1-202ENST00000332220 LINS1Q8NG48 757 aa26.64■■□□□ 1.86
YBX1-202ENST00000332220 KLRG2A4D1S0 409 aaPredicted RBP26.63■■□□□ 1.85
YBX1-202ENST00000332220 H0YIN7 160 aa26.63■■□□□ 1.85
YBX1-202ENST00000332220 HCLS1P14317 486 aaPredicted RBP26.63■■□□□ 1.85
YBX1-202ENST00000332220 C3orf67Q6ZVT6 689 aa26.63■■□□□ 1.85
YBX1-202ENST00000332220 JARID2Q92833 1246 aaPredicted RBP26.63■■□□□ 1.85
YBX1-202ENST00000332220 SLC4A10Q6U841 1118 aa26.62■■□□□ 1.85
YBX1-202ENST00000332220 CHD4Q14839 1912 aa26.62■■□□□ 1.85
YBX1-202ENST00000332220 KIF16BQ96L93 1317 aa26.62■■□□□ 1.85
YBX1-202ENST00000332220 PCCAP05165 728 aaPredicted RBP26.61■■□□□ 1.85
YBX1-202ENST00000332220 SRGNP10124 158 aa26.61■■□□□ 1.85
YBX1-202ENST00000332220 YBX3P16989 372 aaKnown RBP eCLIP26.61■■□□□ 1.851e-22■□□□□ 10.9
YBX1-202ENST00000332220 PELP1Q8IZL8 1130 aaKnown RBP26.61■■□□□ 1.85
YBX1-202ENST00000332220 ZBTB38Q8NAP3 1195 aaPredicted RBP26.61■■□□□ 1.85
YBX1-202ENST00000332220 PDZRN3Q9UPQ7 1066 aa26.61■■□□□ 1.85
YBX1-202ENST00000332220 GCKRQ14397 625 aa26.6■■□□□ 1.85
YBX1-202ENST00000332220 PIM2Q9P1W9 311 aa26.6■■□□□ 1.85
YBX1-202ENST00000332220 CRY2Q49AN0 593 aa26.59■■□□□ 1.85
YBX1-202ENST00000332220 CCDC88AQ3V6T2 1871 aa26.59■■□□□ 1.85
YBX1-202ENST00000332220 ZNF622Q969S3 477 aaKnown RBP eCLIP26.58■■□□□ 1.853e-25■□□□□ 9.5
YBX1-202ENST00000332220 SPEF2Q9C093 1822 aa26.58■■□□□ 1.84
YBX1-202ENST00000332220 IRS4O14654 1257 aaPredicted RBP26.57■■□□□ 1.84
YBX1-202ENST00000332220 GPR162Q16538 588 aa26.57■■□□□ 1.84
YBX1-202ENST00000332220 MASTLQ96GX5 879 aa26.57■■□□□ 1.84
YBX1-202ENST00000332220 NLRP3Q96P20 1036 aa26.57■■□□□ 1.84
YBX1-202ENST00000332220 SRCIN1Q9C0H9 1055 aa26.57■■□□□ 1.84
YBX1-202ENST00000332220 BCS1LQ9Y276 419 aa26.57■■□□□ 1.84
YBX1-202ENST00000332220 H7C1W4 665 aa26.56■■□□□ 1.84
YBX1-202ENST00000332220 NPR1P16066 1061 aa26.56■■□□□ 1.84
YBX1-202ENST00000332220 STYK1Q6J9G0 422 aa26.56■■□□□ 1.84
YBX1-202ENST00000332220 FRAT1Q92837 279 aaPredicted RBP26.56■■□□□ 1.84
YBX1-202ENST00000332220 API5Q9BZZ5 524 aaKnown RBP26.56■■□□□ 1.84
YBX1-202ENST00000332220 TNNQ9UQP3 1299 aa26.56■■□□□ 1.84
YBX1-202ENST00000332220 CDHR2Q9BYE9 1310 aa26.56■■□□□ 1.84
YBX1-202ENST00000332220 FER1L6Q2WGJ9 1857 aa26.55■■□□□ 1.84
YBX1-202ENST00000332220 COL4A1P02462 1669 aa26.55■■□□□ 1.84
YBX1-202ENST00000332220 ALDH1L1O75891 902 aa26.55■■□□□ 1.84
YBX1-202ENST00000332220 DALRD3Q5D0E6 543 aaKnown RBP26.55■■□□□ 1.84
YBX1-202ENST00000332220 UBE3BQ7Z3V4 1068 aa26.55■■□□□ 1.84
YBX1-202ENST00000332220 ARHGAP45Q92619 1136 aa26.55■■□□□ 1.84
YBX1-202ENST00000332220 SBF1O95248 1867 aa26.55■■□□□ 1.84
YBX1-202ENST00000332220 CASP7P55210 303 aa26.54■■□□□ 1.84
YBX1-202ENST00000332220 TTLL6Q8N841 843 aa26.54■■□□□ 1.84
YBX1-202ENST00000332220 IPO8O15397 1037 aaKnown RBP26.52■■□□□ 1.84
YBX1-202ENST00000332220 TRIM27P14373 513 aa26.52■■□□□ 1.84
YBX1-202ENST00000332220 HOXA10P31260 410 aaPredicted RBP26.52■■□□□ 1.84
YBX1-202ENST00000332220 RPGRQ92834 1020 aaKnown RBP26.52■■□□□ 1.84
YBX1-202ENST00000332220 RCAN3Q9UKA8 241 aa26.52■■□□□ 1.84
YBX1-202ENST00000332220 ABCC4O15439 1325 aa26.51■■□□□ 1.83
YBX1-202ENST00000332220 PDE8AO60658 829 aa26.51■■□□□ 1.83
YBX1-202ENST00000332220 ATF7IPQ6VMQ6 1270 aa26.51■■□□□ 1.83
YBX1-202ENST00000332220 CNKSR1Q969H4 720 aa26.51■■□□□ 1.83
YBX1-202ENST00000332220 UTRNP46939 3433 aa26.51■■□□□ 1.83
YBX1-202ENST00000332220 DCAF8L1A6NGE4 600 aa26.5■■□□□ 1.83
YBX1-202ENST00000332220 GRM8O00222 908 aa26.5■■□□□ 1.83
YBX1-202ENST00000332220 SF3B3Q15393 1217 aaKnown RBP26.5■■□□□ 1.83
YBX1-202ENST00000332220 ZKSCAN2Q63HK3 967 aa26.5■■□□□ 1.83
YBX1-202ENST00000332220 PRPF40BQ6NWY9 871 aaKnown RBP26.5■■□□□ 1.83
YBX1-202ENST00000332220 CCT4P50991 539 aaKnown RBP26.48■■□□□ 1.83
YBX1-202ENST00000332220 CLUAP1Q96AJ1 413 aa26.48■■□□□ 1.83
YBX1-202ENST00000332220 RBM17Q96I25 401 aaKnown RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms