RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 GALNT6Q8NCL4 622 aa3.24□□□□□ -1.89
CCDC144A-201ENST00000328495 STK32AQ8WU08 396 aa3.24□□□□□ -1.89
CCDC144A-201ENST00000328495 BRD7Q9NPI1 651 aa3.24□□□□□ -1.89
CCDC144A-201ENST00000328495 PHF20L1A8MW92 1017 aa3.24□□□□□ -1.89
CCDC144A-201ENST00000328495 TYRO3Q06418 890 aa3.24□□□□□ -1.89
CCDC144A-201ENST00000328495 ZNF468Q5VIY5 522 aaPredicted RBP3.24□□□□□ -1.89
CCDC144A-201ENST00000328495 EDARADDQ8WWZ3 215 aa3.24□□□□□ -1.89
CCDC144A-201ENST00000328495 MED14O60244 1454 aa3.24□□□□□ -1.89
CCDC144A-201ENST00000328495 ERCC6Q03468 1493 aa3.24□□□□□ -1.89
CCDC144A-201ENST00000328495 EIF4G1Q04637 1599 aaKnown RBP3.24□□□□□ -1.89
CCDC144A-201ENST00000328495 NEURL1BA8MQ27 555 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 TGFBR3LH3BV60 316 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 AMPD1P23109 780 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 KCNMA1Q12791 1236 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 ZNF280CQ8ND82 737 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 STRN4Q9NRL3 753 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 DNMT3AQ9Y6K1 912 aaPredicted RBP3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 BTLAQ7Z6A9 289 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 KCNH4Q9UQ05 1017 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 SHISA8B8ZZ34 492 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 PRMT3O60678 531 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 EPXP11678 715 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 EPB42P16452 691 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 KCNQ4P56696 695 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 SFSWAPQ12872 951 aaKnown RBP3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 TMEM164Q5U3C3 297 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 KANK3Q6NY19 840 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 BEND7Q8N7W2 519 aaPredicted RBP3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 MYO19Q96H55 970 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 PRIMPOLQ96LW4 560 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 HCN2Q9UL51 889 aa3.23□□□□□ -1.89
CCDC144A-201ENST00000328495 PPP1R15AO75807 674 aaPredicted RBP3.22□□□□□ -1.89
CCDC144A-201ENST00000328495 PCBP4P57723 403 aaKnown RBP3.22□□□□□ -1.89
CCDC144A-201ENST00000328495 SPEM2Q0P670 501 aa3.22□□□□□ -1.89
CCDC144A-201ENST00000328495 FKBP5Q13451 457 aaPredicted RBP3.22□□□□□ -1.89
CCDC144A-201ENST00000328495 RRAGCQ9HB90 399 aa3.22□□□□□ -1.89
CCDC144A-201ENST00000328495 PIK3R2O00459 728 aa3.22□□□□□ -1.89
CCDC144A-201ENST00000328495 IRS1P35568 1242 aa3.22□□□□□ -1.89
CCDC144A-201ENST00000328495 FAM69CQ0P6D2 419 aa3.22□□□□□ -1.89
CCDC144A-201ENST00000328495 DGKZQ13574 1117 aa3.22□□□□□ -1.89
CCDC144A-201ENST00000328495 SYT9Q86SS6 491 aa3.22□□□□□ -1.89
CCDC144A-201ENST00000328495 QTRT2Q9H974 415 aaKnown RBP3.22□□□□□ -1.89
CCDC144A-201ENST00000328495 MKL2Q9ULH7 1088 aa3.22□□□□□ -1.89
CCDC144A-201ENST00000328495 OCLNQ16625 522 aa3.21□□□□□ -1.89
CCDC144A-201ENST00000328495 C1orf229Q6ZS94 237 aaPredicted RBP3.21□□□□□ -1.89
CCDC144A-201ENST00000328495 FCHSD1Q86WN1 690 aa3.21□□□□□ -1.89
CCDC144A-201ENST00000328495 CLP1Q92989 425 aaKnown RBP3.21□□□□□ -1.89
CCDC144A-201ENST00000328495 KLK14Q9P0G3 267 aa3.21□□□□□ -1.89
CCDC144A-201ENST00000328495 CXXC1Q9P0U4 656 aaPredicted RBP3.21□□□□□ -1.89
CCDC144A-201ENST00000328495 SIN3BO75182 1162 aa3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 RASSF7Q02833 373 aa3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 C11orf91Q3C1V1 193 aa3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 TMEM151AQ8N4L1 468 aa3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 COL26A1Q96A83 441 aa3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 C1orf115Q9H7X2 142 aa3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 EFCC1Q9HA90 598 aa3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 ELOA3CA0A087WX78 387 aaPredicted RBP3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 ELOA3DA6NLF2 546 aaPredicted RBP3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 PTCD1O75127 700 aaKnown RBP3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 ALAS2P22557 587 aa3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 IDH3AP50213 366 aa3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 ARSDP51689 593 aa3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 ELOA3BQ3SY89 546 aa3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 ELOA3Q8NG57 546 aa3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 BTBD6Q96KE9 485 aa3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 SLC30A3Q99726 388 aa3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 KLF15Q9UIH9 416 aa3.21□□□□□ -1.9
CCDC144A-201ENST00000328495 GDF11O95390 407 aa3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 CHSY3Q70JA7 882 aa3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 PNMA5Q96PV4 448 aa3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 BCS1LQ9Y276 419 aa3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 CNTNAP5Q8WYK1 1306 aa3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 PCF11O94913 1555 aaKnown RBP3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 GRIN2CQ14957 1233 aa3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 C16orf46Q6P387 395 aa3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 RAB44Q7Z6P3 723 aaPredicted RBP3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 TNFRSF25Q93038 417 aa3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 BHMTQ93088 406 aa3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 IFT43Q96FT9 208 aa3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 MKNK1Q9BUB5 465 aa3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 DMGDHQ9UI17 866 aaKnown RBP3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 ADARB2-AS1A8MUL3 147 aa3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 MICAL2O94851 1124 aa3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 ATP2B4P23634 1241 aa3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 SNRPNP63162 240 aaKnown RBP3.2□□□□□ -1.9
CCDC144A-201ENST00000328495 INPP5BP32019 993 aa3.19□□□□□ -1.9
CCDC144A-201ENST00000328495 DGKGP49619 791 aa3.19□□□□□ -1.9
CCDC144A-201ENST00000328495 GSK3AP49840 483 aa3.19□□□□□ -1.9
CCDC144A-201ENST00000328495 CCINQ13939 588 aa3.19□□□□□ -1.9
CCDC144A-201ENST00000328495 COX20Q5RI15 118 aa3.19□□□□□ -1.9
CCDC144A-201ENST00000328495 C11orf16Q9NQ32 467 aa3.19□□□□□ -1.9
CCDC144A-201ENST00000328495 GNB5O14775 395 aa3.19□□□□□ -1.9
CCDC144A-201ENST00000328495 BRD2P25440 801 aaKnown RBP3.19□□□□□ -1.9
CCDC144A-201ENST00000328495 ADH7P40394 386 aa3.19□□□□□ -1.9
CCDC144A-201ENST00000328495 ALYREFQ86V81 257 aaKnown RBP3.19□□□□□ -1.9
CCDC144A-201ENST00000328495 NOP53Q9NZM5 478 aaKnown RBP3.19□□□□□ -1.9
CCDC144A-201ENST00000328495 LRFN2Q9ULH4 789 aa3.19□□□□□ -1.9
CCDC144A-201ENST00000328495 TREML1Q86YW5 311 aa3.18□□□□□ -1.9
CCDC144A-201ENST00000328495 UBE2OQ9C0C9 1292 aaKnown RBP3.18□□□□□ -1.9
CCDC144A-201ENST00000328495 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms