RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 SLC10A5Q5PT55 438 aa23.14■■□□□ 1.29
PTPMT1-201ENST00000326656 JMYQ8N9B5 988 aa23.14■■□□□ 1.29
PTPMT1-201ENST00000326656 ADAMTS8Q9UP79 889 aa23.14■■□□□ 1.29
PTPMT1-201ENST00000326656 TRIM35Q9UPQ4 493 aa23.14■■□□□ 1.29
PTPMT1-201ENST00000326656 NEUROD2Q15784 382 aa23.13■■□□□ 1.29
PTPMT1-201ENST00000326656 CCDC146Q8IYE0 955 aa23.13■■□□□ 1.29
PTPMT1-201ENST00000326656 RBM17Q96I25 401 aaKnown RBP23.13■■□□□ 1.29
PTPMT1-201ENST00000326656 ZNF277Q9NRM2 450 aaPredicted RBP23.13■■□□□ 1.29
PTPMT1-201ENST00000326656 SCN4AP35499 1836 aa23.12■■□□□ 1.29
PTPMT1-201ENST00000326656 HOXB7P09629 217 aa23.12■■□□□ 1.29
PTPMT1-201ENST00000326656 SYNE4Q8N205 404 aa23.12■■□□□ 1.29
PTPMT1-201ENST00000326656 NLRP3Q96P20 1036 aa23.12■■□□□ 1.29
PTPMT1-201ENST00000326656 UTP14AQ9BVJ6 771 aaKnown RBP23.12■■□□□ 1.29
PTPMT1-201ENST00000326656 PRKRIP1Q9H875 184 aaPredicted RBP23.12■■□□□ 1.29
PTPMT1-201ENST00000326656 DDX21Q9NR30 783 aaKnown RBP eCLIP23.12■■□□□ 1.29
PTPMT1-201ENST00000326656 IARSP41252 1262 aaKnown RBP23.11■■□□□ 1.29
PTPMT1-201ENST00000326656 CHADLQ6NUI6 762 aa23.11■■□□□ 1.29
PTPMT1-201ENST00000326656 COPS6Q7L5N1 327 aa23.11■■□□□ 1.29
PTPMT1-201ENST00000326656 SNED1Q8TER0 1413 aa23.1■■□□□ 1.29
PTPMT1-201ENST00000326656 PROSER3Q2NL68 480 aa23.1■■□□□ 1.29
PTPMT1-201ENST00000326656 OLFM4Q6UX06 510 aa23.1■■□□□ 1.29
PTPMT1-201ENST00000326656 FZD9O00144 591 aa23.09■■□□□ 1.29
PTPMT1-201ENST00000326656 COL13A1Q5TAT6 717 aaPredicted RBP23.09■■□□□ 1.29
PTPMT1-201ENST00000326656 JDP2Q8WYK2 163 aa23.09■■□□□ 1.29
PTPMT1-201ENST00000326656 CFAP44Q96MT7 982 aa23.09■■□□□ 1.29
PTPMT1-201ENST00000326656 CAPN15O75808 1086 aa23.08■■□□□ 1.29
PTPMT1-201ENST00000326656 TCIRG1Q13488 830 aa23.08■■□□□ 1.29
PTPMT1-201ENST00000326656 XAGE3Q8WTP9 111 aa23.08■■□□□ 1.29
PTPMT1-201ENST00000326656 TMX4Q9H1E5 349 aaPredicted RBP23.08■■□□□ 1.29
PTPMT1-201ENST00000326656 ANXA1P04083 346 aa23.07■■□□□ 1.28
PTPMT1-201ENST00000326656 TAF1DQ9H5J8 278 aaPredicted RBP23.07■■□□□ 1.28
PTPMT1-201ENST00000326656 LAS1LQ9Y4W2 734 aaKnown RBP23.07■■□□□ 1.28
PTPMT1-201ENST00000326656 NLRP10Q86W26 655 aa23.06■■□□□ 1.28
PTPMT1-201ENST00000326656 LDHDQ86WU2 507 aa23.06■■□□□ 1.28
PTPMT1-201ENST00000326656 GPC2Q8N158 579 aa23.06■■□□□ 1.28
PTPMT1-201ENST00000326656 VPS33BQ9H267 617 aa23.06■■□□□ 1.28
PTPMT1-201ENST00000326656 DBF4Q9UBU7 674 aaPredicted RBP23.06■■□□□ 1.28
PTPMT1-201ENST00000326656 ANKRD36CQ5JPF3 1778 aa23.06■■□□□ 1.28
PTPMT1-201ENST00000326656 CALD1Q05682 793 aaKnown RBP23.05■■□□□ 1.28
PTPMT1-201ENST00000326656 AIMP1Q12904 312 aaKnown RBP23.05■■□□□ 1.28
PTPMT1-201ENST00000326656 HACL1Q9UJ83 578 aa23.05■■□□□ 1.28
PTPMT1-201ENST00000326656 PPEF1O14829 653 aaPredicted RBP23.04■■□□□ 1.28
PTPMT1-201ENST00000326656 BBOX1O75936 387 aa23.04■■□□□ 1.28
PTPMT1-201ENST00000326656 HDGFL1Q5TGJ6 251 aa23.04■■□□□ 1.28
PTPMT1-201ENST00000326656 PNMA8AQ86V59 439 aaPredicted RBP23.04■■□□□ 1.28
PTPMT1-201ENST00000326656 NECTIN2Q92692 538 aa23.04■■□□□ 1.28
PTPMT1-201ENST00000326656 ZNF541Q9H0D2 1346 aa23.04■■□□□ 1.28
PTPMT1-201ENST00000326656 KRT24Q2M2I5 525 aa23.03■■□□□ 1.28
PTPMT1-201ENST00000326656 PLBD2Q8NHP8 589 aa23.03■■□□□ 1.28
PTPMT1-201ENST00000326656 HYPKQ9NX55 129 aa23.03■■□□□ 1.28
PTPMT1-201ENST00000326656 CHPF2Q9P2E5 772 aa23.03■■□□□ 1.28
PTPMT1-201ENST00000326656 ATP6V0A2Q9Y487 856 aa23.03■■□□□ 1.28
PTPMT1-201ENST00000326656 EIF6P56537 245 aaKnown RBP23.02■■□□□ 1.28
PTPMT1-201ENST00000326656 ANKRD13DQ6ZTN6 518 aa23.02■■□□□ 1.28
PTPMT1-201ENST00000326656 C3orf67Q6ZVT6 689 aa23.02■■□□□ 1.28
PTPMT1-201ENST00000326656 CREBZFQ9NS37 354 aa23.02■■□□□ 1.28
PTPMT1-201ENST00000326656 TRMT112Q9UI30 125 aaKnown RBP23.02■■□□□ 1.28
PTPMT1-201ENST00000326656 SH3TC1Q8TE82 1336 aa23.02■■□□□ 1.28
PTPMT1-201ENST00000326656 ZNF853P0CG23 659 aa23.01■■□□□ 1.27
PTPMT1-201ENST00000326656 POTEIP0CG38 1075 aa23■■□□□ 1.27
PTPMT1-201ENST00000326656 POTEJP0CG39 1038 aa23■■□□□ 1.27
PTPMT1-201ENST00000326656 EPHX2P34913 555 aa23■■□□□ 1.27
PTPMT1-201ENST00000326656 DUSP27Q5VZP5 1158 aa23■■□□□ 1.27
PTPMT1-201ENST00000326656 SP8Q8IXZ3 490 aa23■■□□□ 1.27
PTPMT1-201ENST00000326656 LARGE2Q8N3Y3 721 aa23■■□□□ 1.27
PTPMT1-201ENST00000326656 SUPT20HQ8NEM7 779 aa23■■□□□ 1.27
PTPMT1-201ENST00000326656 CHMP4AQ9BY43 222 aa23■■□□□ 1.27
PTPMT1-201ENST00000326656 IFT57Q9NWB7 429 aa23■■□□□ 1.27
PTPMT1-201ENST00000326656 GNAI1P63096 354 aa22.99■■□□□ 1.27
PTPMT1-201ENST00000326656 MBIPQ9NS73 344 aa22.99■■□□□ 1.27
PTPMT1-201ENST00000326656 ABCC4O15439 1325 aa22.99■■□□□ 1.27
PTPMT1-201ENST00000326656 APAF1O14727 1248 aa22.98■■□□□ 1.27
PTPMT1-201ENST00000326656 TRIM28Q13263 835 aaKnown RBP22.98■■□□□ 1.27
PTPMT1-201ENST00000326656 DDX46Q7L014 1031 aaKnown RBP22.98■■□□□ 1.27
PTPMT1-201ENST00000326656 TMC4Q7Z404 712 aa22.98■■□□□ 1.27
PTPMT1-201ENST00000326656 RTFDC1Q9BY42 306 aaPredicted RBP22.98■■□□□ 1.27
PTPMT1-201ENST00000326656 PASKQ96RG2 1323 aa22.98■■□□□ 1.27
PTPMT1-201ENST00000326656 ITGBL1O95965 494 aaPredicted RBP22.97■■□□□ 1.27
PTPMT1-201ENST00000326656 HCLS1P14317 486 aaPredicted RBP22.97■■□□□ 1.27
PTPMT1-201ENST00000326656 ISCA1Q9BUE6 129 aa22.97■■□□□ 1.27
PTPMT1-201ENST00000326656 TCERG1O14776 1098 aaKnown RBP22.96■■□□□ 1.27
PTPMT1-201ENST00000326656 EAPPQ56P03 285 aaPredicted RBP22.96■■□□□ 1.27
PTPMT1-201ENST00000326656 NIM1KQ8IY84 436 aa22.96■■□□□ 1.27
PTPMT1-201ENST00000326656 LAMB2P55268 1798 aa22.96■■□□□ 1.27
PTPMT1-201ENST00000326656 LMOD1P29536 600 aaPredicted RBP22.95■■□□□ 1.26
PTPMT1-201ENST00000326656 GRAPQ13588 217 aa22.95■■□□□ 1.26
PTPMT1-201ENST00000326656 GRAPLQ8TC17 118 aaPredicted RBP22.95■■□□□ 1.26
PTPMT1-201ENST00000326656 CLEC11AQ9Y240 323 aa22.95■■□□□ 1.26
PTPMT1-201ENST00000326656 PCNTO95613 3336 aa22.95■■□□□ 1.26
PTPMT1-201ENST00000326656 ADAMTSL1Q8N6G6 1762 aa22.94■■□□□ 1.26
PTPMT1-201ENST00000326656 PPIP5K2O43314 1243 aa22.94■■□□□ 1.26
PTPMT1-201ENST00000326656 TNS4Q8IZW8 715 aa22.94■■□□□ 1.26
PTPMT1-201ENST00000326656 MPNDQ8N594 471 aa22.94■■□□□ 1.26
PTPMT1-201ENST00000326656 GJA3Q9Y6H8 435 aa22.94■■□□□ 1.26
PTPMT1-201ENST00000326656 COL4A5P29400 1685 aa22.93■■□□□ 1.26
PTPMT1-201ENST00000326656 SF3B3Q15393 1217 aaKnown RBP22.93■■□□□ 1.26
PTPMT1-201ENST00000326656 DPP8Q6V1X1 898 aaPredicted RBP22.93■■□□□ 1.26
PTPMT1-201ENST00000326656 ZNRF3Q9ULT6 936 aa22.93■■□□□ 1.26
PTPMT1-201ENST00000326656 HSP90B1P14625 803 aaKnown RBP22.92■■□□□ 1.26
PTPMT1-201ENST00000326656 TMEM88BA6NKF7 163 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms