RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 SYT1P21579 422 aa23.84■■□□□ 1.41
SOX2-201ENST00000325404 UBE2HP62256 183 aa23.84■■□□□ 1.41
SOX2-201ENST00000325404 SIPA1L3O60292 1781 aaPredicted RBP23.83■■□□□ 1.41
SOX2-201ENST00000325404 F13A1P00488 732 aa23.83■■□□□ 1.41
SOX2-201ENST00000325404 DDX58O95786 925 aaKnown RBP23.83■■□□□ 1.41
SOX2-201ENST00000325404 CASTP20810 708 aaKnown RBP23.83■■□□□ 1.41
SOX2-201ENST00000325404 WDR17Q8IZU2 1322 aa23.83■■□□□ 1.41
SOX2-201ENST00000325404 PHKG2P15735 406 aa23.82■■□□□ 1.4
SOX2-201ENST00000325404 NECTIN1Q15223 517 aa23.82■■□□□ 1.4
SOX2-201ENST00000325404 CYP46A1Q9Y6A2 500 aa23.82■■□□□ 1.4
SOX2-201ENST00000325404 ANXA1P04083 346 aa23.82■■□□□ 1.4
SOX2-201ENST00000325404 IFNL2Q8IZJ0 200 aa23.82■■□□□ 1.4
SOX2-201ENST00000325404 PDRG1Q9NUG6 133 aa23.82■■□□□ 1.4
SOX2-201ENST00000325404 DDX21Q9NR30 783 aaKnown RBP eCLIP23.81■■□□□ 1.4
SOX2-201ENST00000325404 ABCA3Q99758 1704 aa23.81■■□□□ 1.4
SOX2-201ENST00000325404 CCDC171Q6TFL3 1326 aa23.8■■□□□ 1.4
SOX2-201ENST00000325404 GRM8O00222 908 aa23.8■■□□□ 1.4
SOX2-201ENST00000325404 HSP90AA2PQ14568 343 aaPredicted RBP23.8■■□□□ 1.4
SOX2-201ENST00000325404 ZKSCAN1P17029 563 aaPredicted RBP23.8■■□□□ 1.4
SOX2-201ENST00000325404 PTH1RQ03431 593 aa23.8■■□□□ 1.4
SOX2-201ENST00000325404 GDPD2Q9HCC8 539 aa23.8■■□□□ 1.4
SOX2-201ENST00000325404 TOM1L2Q6ZVM7 507 aa23.79■■□□□ 1.4
SOX2-201ENST00000325404 ALDH8A1Q9H2A2 487 aaPredicted RBP23.79■■□□□ 1.4
SOX2-201ENST00000325404 COL5A2P05997 1499 aaPredicted RBP23.79■■□□□ 1.4
SOX2-201ENST00000325404 PROSER3Q2NL68 480 aa23.79■■□□□ 1.4
SOX2-201ENST00000325404 RNF214Q8ND24 703 aa23.79■■□□□ 1.4
SOX2-201ENST00000325404 MAP4K1Q92918 833 aa23.79■■□□□ 1.4
SOX2-201ENST00000325404 CNPY2Q9Y2B0 182 aa23.79■■□□□ 1.4
SOX2-201ENST00000325404 KDM6AO15550 1401 aaPredicted RBP23.79■■□□□ 1.4
SOX2-201ENST00000325404 JAKMIP1Q96N16 626 aaKnown RBP23.78■■□□□ 1.4
SOX2-201ENST00000325404 G3BP1Q13283 466 aaKnown RBP eCLIP23.78■■□□□ 1.4
SOX2-201ENST00000325404 AACSQ86V21 672 aa23.78■■□□□ 1.4
SOX2-201ENST00000325404 PSMA5P28066 241 aa23.77■■□□□ 1.4
SOX2-201ENST00000325404 PRPF40BQ6NWY9 871 aaKnown RBP23.77■■□□□ 1.4
SOX2-201ENST00000325404 MRC1P22897 1456 aa23.77■■□□□ 1.4
SOX2-201ENST00000325404 KAZALD1Q96I82 304 aa23.77■■□□□ 1.4
SOX2-201ENST00000325404 SLC52A2Q9HAB3 445 aa23.77■■□□□ 1.4
SOX2-201ENST00000325404 MTMR6Q9Y217 621 aa23.77■■□□□ 1.4
SOX2-201ENST00000325404 PKD1L3Q7Z443 1732 aa23.76■■□□□ 1.39
SOX2-201ENST00000325404 CYP27B1O15528 508 aa23.76■■□□□ 1.39
SOX2-201ENST00000325404 SASH1O94885 1247 aa23.76■■□□□ 1.39
SOX2-201ENST00000325404 GJB2P29033 226 aa23.76■■□□□ 1.39
SOX2-201ENST00000325404 SUCLG2Q96I99 432 aa23.76■■□□□ 1.39
SOX2-201ENST00000325404 DCAF5Q96JK2 942 aa23.76■■□□□ 1.39
SOX2-201ENST00000325404 PA2G4Q9UQ80 394 aaKnown RBP23.76■■□□□ 1.39
SOX2-201ENST00000325404 TCHHQ07283 1943 aa23.76■■□□□ 1.39
SOX2-201ENST00000325404 CWF19L2Q2TBE0 894 aaKnown RBP23.75■■□□□ 1.39
SOX2-201ENST00000325404 SCN11AQ9UI33 1791 aa23.75■■□□□ 1.39
SOX2-201ENST00000325404 ADCK5Q3MIX3 580 aa23.75■■□□□ 1.39
SOX2-201ENST00000325404 CREB3L3Q68CJ9 461 aa23.75■■□□□ 1.39
SOX2-201ENST00000325404 LARP1Q6PKG0 1096 aaKnown RBP23.75■■□□□ 1.39
SOX2-201ENST00000325404 LARGE1O95461 756 aa23.74■■□□□ 1.39
SOX2-201ENST00000325404 PDIA6Q15084 440 aa23.74■■□□□ 1.39
SOX2-201ENST00000325404 RBM8AQ9Y5S9 174 aaKnown RBP23.74■■□□□ 1.39
SOX2-201ENST00000325404 JCADQ9P266 1359 aa23.74■■□□□ 1.39
SOX2-201ENST00000325404 ANKRD1Q15327 319 aa23.74■■□□□ 1.39
SOX2-201ENST00000325404 FOXD4L6Q3SYB3 417 aaPredicted RBP23.74■■□□□ 1.39
SOX2-201ENST00000325404 FOXD4L3Q6VB84 417 aaPredicted RBP23.74■■□□□ 1.39
SOX2-201ENST00000325404 CCDC83Q8IWF9 413 aa23.74■■□□□ 1.39
SOX2-201ENST00000325404 EAF2Q96CJ1 260 aaPredicted RBP23.74■■□□□ 1.39
SOX2-201ENST00000325404 CARD10Q9BWT7 1032 aa23.73■■□□□ 1.39
SOX2-201ENST00000325404 BICC1Q9H694 974 aaKnown RBP23.73■■□□□ 1.39
SOX2-201ENST00000325404 TSGA10IPQ3SY00 556 aa23.73■■□□□ 1.39
SOX2-201ENST00000325404 RNF20Q5VTR2 975 aa23.73■■□□□ 1.39
SOX2-201ENST00000325404 CPA1P15085 419 aa23.72■■□□□ 1.39
SOX2-201ENST00000325404 EVA1CP58658 441 aa23.72■■□□□ 1.39
SOX2-201ENST00000325404 GLIPR1L2Q4G1C9 344 aa23.72■■□□□ 1.39
SOX2-201ENST00000325404 ZNF790Q6PG37 636 aa23.72■■□□□ 1.39
SOX2-201ENST00000325404 NFATC2IPQ8NCF5 419 aa23.72■■□□□ 1.39
SOX2-201ENST00000325404 STRN4Q9NRL3 753 aa23.72■■□□□ 1.39
SOX2-201ENST00000325404 PDCP20941 246 aa23.71■■□□□ 1.39
SOX2-201ENST00000325404 NMIQ13287 307 aaPredicted RBP23.71■■□□□ 1.39
SOX2-201ENST00000325404 FUCA2Q9BTY2 467 aa23.71■■□□□ 1.39
SOX2-201ENST00000325404 HMG20BQ9P0W2 317 aa23.71■■□□□ 1.39
SOX2-201ENST00000325404 ROBO1Q9Y6N7 1651 aa23.71■■□□□ 1.39
SOX2-201ENST00000325404 PARP4Q9UKK3 1724 aaKnown RBP23.71■■□□□ 1.39
SOX2-201ENST00000325404 ME3Q16798 604 aa23.71■■□□□ 1.39
SOX2-201ENST00000325404 MED23Q9ULK4 1368 aa23.71■■□□□ 1.39
SOX2-201ENST00000325404 LTBP4Q8N2S1 1624 aa23.7■■□□□ 1.39
SOX2-201ENST00000325404 SLC27A2O14975 620 aa23.7■■□□□ 1.38
SOX2-201ENST00000325404 PTMAP06454 111 aaKnown RBP23.7■■□□□ 1.38
SOX2-201ENST00000325404 ST3GAL1Q11201 340 aa23.7■■□□□ 1.38
SOX2-201ENST00000325404 COL15A1P39059 1388 aa23.7■■□□□ 1.38
SOX2-201ENST00000325404 IGKV5-2P06315 115 aa23.7■■□□□ 1.38
SOX2-201ENST00000325404 NEXNQ0ZGT2 675 aa23.7■■□□□ 1.38
SOX2-201ENST00000325404 PCDH11XQ9BZA7 1347 aa23.7■■□□□ 1.38
SOX2-201ENST00000325404 PCDH11YQ9BZA8 1340 aa23.7■■□□□ 1.38
SOX2-201ENST00000325404 KIAA2012Q0VF49 1180 aa23.69■■□□□ 1.38
SOX2-201ENST00000325404 SLC39A6Q13433 755 aa23.69■■□□□ 1.38
SOX2-201ENST00000325404 RFX7Q2KHR2 1363 aa23.69■■□□□ 1.38
SOX2-201ENST00000325404 ZCRB1Q8TBF4 217 aaKnown RBP23.69■■□□□ 1.38
SOX2-201ENST00000325404 ELP1O95163 1332 aa23.69■■□□□ 1.38
SOX2-201ENST00000325404 PRAMEF22A3QJZ6 481 aa23.69■■□□□ 1.38
SOX2-201ENST00000325404 IL2RBP14784 551 aa23.69■■□□□ 1.38
SOX2-201ENST00000325404 LARP6Q9BRS8 491 aaKnown RBP23.69■■□□□ 1.38
SOX2-201ENST00000325404 PDCL3Q9H2J4 239 aa23.69■■□□□ 1.38
SOX2-201ENST00000325404 R3HCC1Q9Y3T6 440 aaKnown RBP23.69■■□□□ 1.38
SOX2-201ENST00000325404 AHDC1Q5TGY3 1603 aaPredicted RBP23.68■■□□□ 1.38
SOX2-201ENST00000325404 FIBPO43427 364 aa23.68■■□□□ 1.38
SOX2-201ENST00000325404 KCNJ4P48050 445 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms