RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 CPA1P15085 419 aa9.21□□□□□ -0.94
CD46-201ENST00000322875 ERCC6LQ2NKX8 1250 aa9.21□□□□□ -0.94
CD46-201ENST00000322875 LEO1Q8WVC0 666 aaPredicted RBP9.21□□□□□ -0.94
CD46-201ENST00000322875 OSBPL5Q9H0X9 879 aaPredicted RBP9.21□□□□□ -0.94
CD46-201ENST00000322875 CCDC69A6NI79 296 aa9.2□□□□□ -0.94
CD46-201ENST00000322875 F6X3S4 739 aa9.2□□□□□ -0.94
CD46-201ENST00000322875 RAPGEF3O95398 923 aa9.2□□□□□ -0.94
CD46-201ENST00000322875 CASTP20810 708 aaKnown RBP9.2□□□□□ -0.94
CD46-201ENST00000322875 ADCK5Q3MIX3 580 aa9.2□□□□□ -0.94
CD46-201ENST00000322875 E4F1Q66K89 784 aaPredicted RBP9.2□□□□□ -0.94
CD46-201ENST00000322875 GTF3C6Q969F1 213 aa9.2□□□□□ -0.94
CD46-201ENST00000322875 CACNA1FO60840 1977 aa9.2□□□□□ -0.94
CD46-201ENST00000322875 NBPF11Q86T75 865 aa9.2□□□□□ -0.94
CD46-201ENST00000322875 DHX40Q8IX18 779 aaKnown RBP9.2□□□□□ -0.94
CD46-201ENST00000322875 TXLNBQ8N3L3 684 aa9.2□□□□□ -0.94
CD46-201ENST00000322875 SSH3Q8TE77 659 aa9.2□□□□□ -0.94
CD46-201ENST00000322875 ALDH8A1Q9H2A2 487 aaPredicted RBP9.2□□□□□ -0.94
CD46-201ENST00000322875 CPS1P31327 1500 aa9.2□□□□□ -0.94
CD46-201ENST00000322875 C11orf57Q6ZUT1 292 aaPredicted RBP9.2□□□□□ -0.94
CD46-201ENST00000322875 PDRG1Q9NUG6 133 aa9.2□□□□□ -0.94
CD46-201ENST00000322875 TPCN1Q9ULQ1 816 aa9.2□□□□□ -0.94
CD46-201ENST00000322875 SPATA31D1Q6ZQQ2 1576 aa9.19□□□□□ -0.94
CD46-201ENST00000322875 TUBB4AP04350 444 aa9.19□□□□□ -0.94
CD46-201ENST00000322875 GNAI3P08754 354 aa9.19□□□□□ -0.94
CD46-201ENST00000322875 IRX3P78415 501 aaPredicted RBP9.19□□□□□ -0.94
CD46-201ENST00000322875 POLA2Q14181 598 aa9.19□□□□□ -0.94
CD46-201ENST00000322875 NECTIN1Q15223 517 aa9.19□□□□□ -0.94
CD46-201ENST00000322875 RGS22Q8NE09 1264 aa9.19□□□□□ -0.94
CD46-201ENST00000322875 ORC3Q9UBD5 711 aaPredicted RBP9.19□□□□□ -0.94
CD46-201ENST00000322875 PSDA5PKW4 1024 aaPredicted RBP9.19□□□□□ -0.94
CD46-201ENST00000322875 NUTM2DQ5VT03 806 aaPredicted RBP9.19□□□□□ -0.94
CD46-201ENST00000322875 FAM173BQ6P4H8 233 aa9.19□□□□□ -0.94
CD46-201ENST00000322875 IQUBQ8NA54 791 aa9.19□□□□□ -0.94
CD46-201ENST00000322875 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.19□□□□□ -0.941e-6■■■□□ 14.7
CD46-201ENST00000322875 MAP3K5Q99683 1374 aa9.19□□□□□ -0.94
CD46-201ENST00000322875 VPS37CA5D8V6 355 aaPredicted RBP9.18□□□□□ -0.94
CD46-201ENST00000322875 LARP1BQ659C4 914 aaKnown RBP9.18□□□□□ -0.94
CD46-201ENST00000322875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.18□□□□□ -0.941e-6■■■□□ 18.3
CD46-201ENST00000322875 PPP1R13BQ96KQ4 1090 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 PEAK1Q9H792 1746 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 RAB11FIP3O75154 756 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 PTH1RQ03431 593 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 SYT10Q6XYQ8 523 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 REXO1L1PQ8IX06 675 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 SMARCE1Q969G3 411 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 SNRKQ9NRH2 765 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 PSD3Q9NYI0 1048 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 STK26Q9P289 416 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 IMPACTQ9P2X3 320 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 PPP6R1Q9UPN7 881 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 USP16Q9Y5T5 823 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 NALCNQ8IZF0 1738 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 HTATSF1O43719 755 aaKnown RBP9.18□□□□□ -0.94
CD46-201ENST00000322875 DTNBO60941 627 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 ST5P78524 1137 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 IDI1Q13907 227 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 NEK11Q8NG66 645 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 SPATA32Q96LK8 384 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 TRMT1Q9NXH9 659 aaKnown RBP9.18□□□□□ -0.94
CD46-201ENST00000322875 FER1L4A9Z1Z3 1794 aa9.18□□□□□ -0.94
CD46-201ENST00000322875 PDCP20941 246 aa9.17□□□□□ -0.94
CD46-201ENST00000322875 GSDMDP57764 484 aa9.17□□□□□ -0.94
CD46-201ENST00000322875 SNW1Q13573 536 aaKnown RBP9.17□□□□□ -0.94
CD46-201ENST00000322875 MCM10Q7L590 875 aa9.17□□□□□ -0.94
CD46-201ENST00000322875 RASSF4Q9H2L5 321 aa9.17□□□□□ -0.94
CD46-201ENST00000322875 GEMIN8Q9NWZ8 242 aaKnown RBP9.17□□□□□ -0.94
CD46-201ENST00000322875 CYP46A1Q9Y6A2 500 aa9.17□□□□□ -0.94
CD46-201ENST00000322875 FANCGO15287 622 aa9.17□□□□□ -0.94
CD46-201ENST00000322875 SASH3O75995 380 aa9.17□□□□□ -0.94
CD46-201ENST00000322875 TBC1D8O95759 1140 aa9.17□□□□□ -0.94
CD46-201ENST00000322875 TPM4P67936 248 aa9.17□□□□□ -0.94
CD46-201ENST00000322875 FILIP1Q7Z7B0 1213 aa9.17□□□□□ -0.94
CD46-201ENST00000322875 NECAB1Q8N987 351 aa9.17□□□□□ -0.94
CD46-201ENST00000322875 LCMT1Q9UIC8 334 aa9.17□□□□□ -0.94
CD46-201ENST00000322875 CHMP3Q9Y3E7 222 aa9.17□□□□□ -0.94
CD46-201ENST00000322875 PHLPP2Q6ZVD8 1323 aa9.17□□□□□ -0.94
CD46-201ENST00000322875 TADA3O75528 432 aa9.16□□□□□ -0.94
CD46-201ENST00000322875 MAPK8IP2Q13387 824 aaPredicted RBP9.16□□□□□ -0.94
CD46-201ENST00000322875 COL9A3Q14050 684 aaPredicted RBP9.16□□□□□ -0.94
CD46-201ENST00000322875 ARHGAP29Q52LW3 1261 aa9.16□□□□□ -0.94
CD46-201ENST00000322875 SLC4A10Q6U841 1118 aa9.16□□□□□ -0.94
CD46-201ENST00000322875 NUTM1Q86Y26 1132 aa9.16□□□□□ -0.94
CD46-201ENST00000322875 TEX2Q8IWB9 1127 aa9.16□□□□□ -0.94
CD46-201ENST00000322875 CNTROBQ8N137 903 aa9.16□□□□□ -0.94
CD46-201ENST00000322875 JAKMIP1Q96N16 626 aaKnown RBP9.16□□□□□ -0.94
CD46-201ENST00000322875 TRERF1Q96PN7 1200 aa9.16□□□□□ -0.94
CD46-201ENST00000322875 USP44Q9H0E7 712 aa9.16□□□□□ -0.94
CD46-201ENST00000322875 SPG7Q9UQ90 795 aa9.16□□□□□ -0.94
CD46-201ENST00000322875 SETD1BQ9UPS6 1966 aaKnown RBP9.16□□□□□ -0.94
CD46-201ENST00000322875 MYO1CO00159 1063 aa9.16□□□□□ -0.94
CD46-201ENST00000322875 DHX16O60231 1041 aaKnown RBP9.16□□□□□ -0.94
CD46-201ENST00000322875 RESTQ13127 1097 aa9.16□□□□□ -0.94
CD46-201ENST00000322875 STX1AQ16623 288 aa9.16□□□□□ -0.94
CD46-201ENST00000322875 TEX35Q5T0J7 233 aa9.16□□□□□ -0.94
CD46-201ENST00000322875 NME9Q86XW9 330 aa9.16□□□□□ -0.94
CD46-201ENST00000322875 ZRANB1Q9UGI0 708 aa9.16□□□□□ -0.94
CD46-201ENST00000322875 RSPH14Q9UHP6 348 aa9.16□□□□□ -0.94
CD46-201ENST00000322875 LRRFIP2Q9Y608 721 aaKnown RBP9.16□□□□□ -0.94
CD46-201ENST00000322875 RIMS1Q86UR5 1692 aaKnown RBP9.16□□□□□ -0.94
CD46-201ENST00000322875 ABCC6O95255 1503 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms