RNA–Protein interactions for RNA: ENST00000315266.9

GPHN-201, Transcript of gephyrin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPHN, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-201ENST00000315266 CDCA7Q9BWT1 371 aaPredicted RBP11.88□□□□□ -0.51
GPHN-201ENST00000315266 TRDNQ13061 729 aa11.88□□□□□ -0.51
GPHN-201ENST00000315266 DDB1Q16531 1140 aa11.88□□□□□ -0.51
GPHN-201ENST00000315266 RALYLQ86SE5 291 aaKnown RBP11.87□□□□□ -0.51
GPHN-201ENST00000315266 RASSF8Q8NHQ8 419 aa11.87□□□□□ -0.51
GPHN-201ENST00000315266 KIF1BPQ96EK5 621 aa11.87□□□□□ -0.51
GPHN-201ENST00000315266 FAM89AQ96GI7 184 aa11.87□□□□□ -0.51
GPHN-201ENST00000315266 SDSP20132 328 aa11.87□□□□□ -0.51
GPHN-201ENST00000315266 VPS53Q5VIR6 699 aa11.87□□□□□ -0.51
GPHN-201ENST00000315266 PXDNQ92626 1479 aa11.87□□□□□ -0.51
GPHN-201ENST00000315266 NFAT5O94916 1531 aa11.87□□□□□ -0.51
GPHN-201ENST00000315266 PNMA6EA0A0J9YXQ4 647 aa11.87□□□□□ -0.51
GPHN-201ENST00000315266 HOXB7P09629 217 aa11.87□□□□□ -0.51
GPHN-201ENST00000315266 HAND2P61296 217 aa11.87□□□□□ -0.51
GPHN-201ENST00000315266 ZNF790Q6PG37 636 aa11.87□□□□□ -0.51
GPHN-201ENST00000315266 PEAK1Q9H792 1746 aa11.87□□□□□ -0.51
GPHN-201ENST00000315266 SLIT3O75094 1523 aa11.87□□□□□ -0.51
GPHN-201ENST00000315266 ZBTB7BO15156 539 aaPredicted RBP11.86□□□□□ -0.51
GPHN-201ENST00000315266 CCDC173Q0VFZ6 552 aa11.86□□□□□ -0.51
GPHN-201ENST00000315266 LDHAL6AQ6ZMR3 332 aa11.86□□□□□ -0.51
GPHN-201ENST00000315266 LRRC2Q9BYS8 371 aa11.86□□□□□ -0.51
GPHN-201ENST00000315266 GDPD2Q9HCC8 539 aa11.86□□□□□ -0.51
GPHN-201ENST00000315266 HYPKQ9NX55 129 aa11.86□□□□□ -0.51
GPHN-201ENST00000315266 NCAPD2Q15021 1401 aa11.86□□□□□ -0.51
GPHN-201ENST00000315266 GOLIM4O00461 696 aa11.86□□□□□ -0.51
GPHN-201ENST00000315266 BAG4O95429 457 aaKnown RBP11.86□□□□□ -0.51
GPHN-201ENST00000315266 EIF4A1P60842 406 aaKnown RBP11.86□□□□□ -0.51
GPHN-201ENST00000315266 FAM98CQ17RN3 349 aaKnown RBP11.86□□□□□ -0.51
GPHN-201ENST00000315266 CCDC158Q5M9N0 1113 aa11.86□□□□□ -0.51
GPHN-201ENST00000315266 RNF20Q5VTR2 975 aa11.86□□□□□ -0.51
GPHN-201ENST00000315266 RBM27Q9P2N5 1060 aaKnown RBP11.86□□□□□ -0.51
GPHN-201ENST00000315266 PRIM1P49642 420 aaKnown RBP11.86□□□□□ -0.51
GPHN-201ENST00000315266 CERKQ8TCT0 537 aa11.86□□□□□ -0.51
GPHN-201ENST00000315266 ANTXR1Q9H6X2 564 aa11.86□□□□□ -0.51
GPHN-201ENST00000315266 LTN1O94822 1766 aa11.86□□□□□ -0.51
GPHN-201ENST00000315266 ATP6V1AP38606 617 aa11.86□□□□□ -0.51
GPHN-201ENST00000315266 RHPN1Q8TCX5 695 aa11.86□□□□□ -0.51
GPHN-201ENST00000315266 SYCE3A1L190 88 aa11.85□□□□□ -0.51
GPHN-201ENST00000315266 PROSER3Q2NL68 480 aa11.85□□□□□ -0.51
GPHN-201ENST00000315266 CASTP20810 708 aaKnown RBP11.85□□□□□ -0.51
GPHN-201ENST00000315266 CEP85Q6P2H3 762 aa11.85□□□□□ -0.51
GPHN-201ENST00000315266 ZNF594Q96JF6 807 aaPredicted RBP11.85□□□□□ -0.51
GPHN-201ENST00000315266 STRCP1A6NGW2 1772 aa11.84□□□□□ -0.51
GPHN-201ENST00000315266 CPA1P15085 419 aa11.84□□□□□ -0.51
GPHN-201ENST00000315266 TIMM10P62072 90 aa11.84□□□□□ -0.51
GPHN-201ENST00000315266 ATP2B2Q01814 1243 aa11.84□□□□□ -0.51
GPHN-201ENST00000315266 IFIT5Q13325 482 aaKnown RBP11.84□□□□□ -0.51
GPHN-201ENST00000315266 BICD2Q8TD16 824 aa11.84□□□□□ -0.51
GPHN-201ENST00000315266 BRPF1P55201 1214 aaPredicted RBP11.84□□□□□ -0.51
GPHN-201ENST00000315266 CRB1P82279 1406 aa11.84□□□□□ -0.51
GPHN-201ENST00000315266 GUCY1B3Q02153 619 aa11.84□□□□□ -0.51
GPHN-201ENST00000315266 ERVV-2B6SEH9 535 aa11.83□□□□□ -0.52
GPHN-201ENST00000315266 CLSTN1O94985 981 aa11.83□□□□□ -0.52
GPHN-201ENST00000315266 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.83□□□□□ -0.52
GPHN-201ENST00000315266 LRP2BPQ9P2M1 347 aa11.83□□□□□ -0.52
GPHN-201ENST00000315266 GRM8O00222 908 aa11.83□□□□□ -0.52
GPHN-201ENST00000315266 DNAJC10Q8IXB1 793 aa11.83□□□□□ -0.52
GPHN-201ENST00000315266 ANKRD44Q8N8A2 993 aa11.83□□□□□ -0.52
GPHN-201ENST00000315266 RAI14Q9P0K7 980 aa11.83□□□□□ -0.52
GPHN-201ENST00000315266 CYP27B1O15528 508 aa11.83□□□□□ -0.52
GPHN-201ENST00000315266 IFIT1P09914 478 aaKnown RBP11.83□□□□□ -0.52
GPHN-201ENST00000315266 EDC3Q96F86 508 aaKnown RBP11.83□□□□□ -0.52
GPHN-201ENST00000315266 PDE1AP54750 535 aa11.82□□□□□ -0.52
GPHN-201ENST00000315266 HCLS1P14317 486 aaPredicted RBP11.82□□□□□ -0.52
GPHN-201ENST00000315266 CLCN1P35523 988 aa11.82□□□□□ -0.52
GPHN-201ENST00000315266 CCDC83Q8IWF9 413 aa11.82□□□□□ -0.52
GPHN-201ENST00000315266 SNX21Q969T3 373 aa11.82□□□□□ -0.52
GPHN-201ENST00000315266 TEX13AQ9BXU3 409 aaPredicted RBP11.82□□□□□ -0.52
GPHN-201ENST00000315266 RAB3GAP1Q15042 981 aa11.82□□□□□ -0.52
GPHN-201ENST00000315266 TTC22Q5TAA0 569 aa11.82□□□□□ -0.52
GPHN-201ENST00000315266 KSR2Q6VAB6 950 aa11.82□□□□□ -0.52
GPHN-201ENST00000315266 ERC1Q8IUD2 1116 aa11.82□□□□□ -0.52
GPHN-201ENST00000315266 ZGPATQ8N5A5 531 aaKnown RBP11.82□□□□□ -0.52
GPHN-201ENST00000315266 UBE2Q2Q8WVN8 375 aa11.82□□□□□ -0.52
GPHN-201ENST00000315266 A0A0U1RQG5 324 aaPredicted RBP11.82□□□□□ -0.52
GPHN-201ENST00000315266 MINDY4BA8MYZ0 360 aa11.82□□□□□ -0.52
GPHN-201ENST00000315266 ZPR1O75312 459 aa11.82□□□□□ -0.52
GPHN-201ENST00000315266 AKAP17AQ02040 695 aaKnown RBP11.82□□□□□ -0.52
GPHN-201ENST00000315266 SYNE3Q6ZMZ3 975 aa11.82□□□□□ -0.52
GPHN-201ENST00000315266 ZSCAN30Q86W11 494 aa11.82□□□□□ -0.52
GPHN-201ENST00000315266 BICC1Q9H694 974 aaKnown RBP11.82□□□□□ -0.52
GPHN-201ENST00000315266 NUP133Q8WUM0 1156 aa11.81□□□□□ -0.52
GPHN-201ENST00000315266 JCADQ9P266 1359 aa11.81□□□□□ -0.52
GPHN-201ENST00000315266 GIGYF1O75420 1035 aaPredicted RBP11.81□□□□□ -0.52
GPHN-201ENST00000315266 CD2BP2O95400 341 aaKnown RBP11.81□□□□□ -0.52
GPHN-201ENST00000315266 CHST3Q7LGC8 479 aa11.81□□□□□ -0.52
GPHN-201ENST00000315266 CWC22Q9HCG8 908 aaKnown RBP11.81□□□□□ -0.52
GPHN-201ENST00000315266 CWC25Q9NXE8 425 aaPredicted RBP11.81□□□□□ -0.52
GPHN-201ENST00000315266 USP21Q9UK80 565 aa11.81□□□□□ -0.52
GPHN-201ENST00000315266 GLRX3O76003 335 aaKnown RBP11.81□□□□□ -0.52
GPHN-201ENST00000315266 RBM25P49756 843 aaKnown RBP11.81□□□□□ -0.52
GPHN-201ENST00000315266 MED1Q15648 1581 aaPredicted RBP11.8□□□□□ -0.52
GPHN-201ENST00000315266 PLEKHM2Q8IWE5 1019 aa11.8□□□□□ -0.52
GPHN-201ENST00000315266 CCDC144CPQ8IYA2 1237 aa11.8□□□□□ -0.52
GPHN-201ENST00000315266 DDX21Q9NR30 783 aaKnown RBP eCLIP11.8□□□□□ -0.52
GPHN-201ENST00000315266 CYP46A1Q9Y6A2 500 aa11.8□□□□□ -0.52
GPHN-201ENST00000315266 CCT2P78371 535 aaKnown RBP11.8□□□□□ -0.52
GPHN-201ENST00000315266 BLOC1S2Q6QNY1 142 aa11.8□□□□□ -0.52
GPHN-201ENST00000315266 GAS2L3Q86XJ1 694 aa11.8□□□□□ -0.52
GPHN-201ENST00000315266 PES1O00541 588 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms