RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 IL2RBP14784 551 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 METAP2P50579 478 aaKnown RBP eCLIP13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 HAND2P61296 217 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 CACNA2D4Q7Z3S7 1137 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 UBA5Q9GZZ9 404 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 ESPNB1AK53 854 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 MYO1BO43795 1136 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 AMPD3Q01432 767 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 TRAF1Q13077 416 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 SLC39A6Q13433 755 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 CCDC178Q5BJE1 867 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 LMBR1LQ6UX01 489 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 FSIP1Q8NA03 581 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 UGGT2Q9NYU1 1516 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 STX6O43752 255 aa13.84□□□□□ -0.19
AMBRA1-201ENST00000314845 PPP4R3BQ5MIZ7 849 aa13.84□□□□□ -0.19
AMBRA1-201ENST00000314845 PRAG1Q86YV5 1406 aa13.84□□□□□ -0.19
AMBRA1-201ENST00000314845 POLR3AO14802 1390 aaPredicted RBP13.84□□□□□ -0.19
AMBRA1-201ENST00000314845 ZSCAN12O43309 604 aa13.84□□□□□ -0.19
AMBRA1-201ENST00000314845 LEKR1Q6ZMV7 388 aa13.84□□□□□ -0.19
AMBRA1-201ENST00000314845 TMTC2Q8N394 836 aa13.84□□□□□ -0.19
AMBRA1-201ENST00000314845 CALML4Q96GE6 196 aa13.84□□□□□ -0.19
AMBRA1-201ENST00000314845 SYCP2Q9BX26 1530 aa13.84□□□□□ -0.19
AMBRA1-201ENST00000314845 UBA7P41226 1012 aa13.84□□□□□ -0.19
AMBRA1-201ENST00000314845 JARID2Q92833 1246 aaPredicted RBP13.84□□□□□ -0.19
AMBRA1-201ENST00000314845 NBPF7P0C2Y1 421 aaPredicted RBP13.83□□□□□ -0.19
AMBRA1-201ENST00000314845 TSPYL1Q9H0U9 437 aa13.83□□□□□ -0.19
AMBRA1-201ENST00000314845 TOP1P11387 765 aaKnown RBP13.83□□□□□ -0.2
AMBRA1-201ENST00000314845 GJB2P29033 226 aa13.83□□□□□ -0.2
AMBRA1-201ENST00000314845 ATP8B2P98198 1209 aa13.83□□□□□ -0.2
AMBRA1-201ENST00000314845 NUCB1Q02818 461 aa13.83□□□□□ -0.2
AMBRA1-201ENST00000314845 CCDC148Q8NFR7 591 aa13.83□□□□□ -0.2
AMBRA1-201ENST00000314845 KRT23Q9C075 422 aa13.83□□□□□ -0.2
AMBRA1-201ENST00000314845 NEBLO76041 1014 aa13.83□□□□□ -0.2
AMBRA1-201ENST00000314845 SSR1P43307 286 aaKnown RBP13.83□□□□□ -0.2
AMBRA1-201ENST00000314845 SSFA2P28290 1259 aa13.83□□□□□ -0.2
AMBRA1-201ENST00000314845 CETN1Q12798 172 aa13.83□□□□□ -0.2
AMBRA1-201ENST00000314845 STX8Q9UNK0 236 aa13.83□□□□□ -0.2
AMBRA1-201ENST00000314845 TRAPPC8Q9Y2L5 1435 aa13.83□□□□□ -0.2
AMBRA1-201ENST00000314845 NPATQ14207 1427 aa13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 UBXN4Q92575 508 aa13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 ESR2Q92731 530 aa13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 CNNM2Q9H8M5 875 aa13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 NIP7Q9Y221 180 aaKnown RBP eCLIP13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 TBX22Q9Y458 520 aa13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 CYP7A1P22680 504 aa13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 PDE1AP54750 535 aa13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 WTAPQ15007 396 aa13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 SKAP1Q86WV1 359 aa13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 C8orf58Q8NAV2 365 aa13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 GCP02774 474 aa13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 KANK3Q6NY19 840 aa13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 STXBP4Q6ZWJ1 553 aa13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 ACSBG1Q96GR2 724 aa13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 DCAF5Q96JK2 942 aa13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 NYXQ9GZU5 481 aa13.82□□□□□ -0.2
AMBRA1-201ENST00000314845 ITSN2Q9NZM3 1697 aa13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 CCDC66A2RUB6 948 aa13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 MTHFSDQ2M296 383 aaKnown RBP13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 TSHZ3Q63HK5 1081 aa13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 ZSCAN30Q86W11 494 aa13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 ZSCAN16Q9H4T2 348 aaPredicted RBP13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 VAT1LQ9HCJ6 419 aa13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 TFIP11Q9UBB9 837 aaKnown RBP13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 IDEP14735 1019 aa13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 GNAQP50148 359 aa13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 MRPL50Q8N5N7 158 aaKnown RBP13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 SLC26A6Q9BXS9 759 aa13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 TNPO1Q92973 898 aaKnown RBP13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 UTP14AQ9BVJ6 771 aaKnown RBP13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 CAVIN2O95810 425 aa13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 BMP15O95972 392 aa13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 IGHDP01880 384 aa13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 SDSP20132 328 aa13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 TPTE2Q6XPS3 522 aa13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 BRF1Q92994 677 aa13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 LRRC27Q9C0I9 530 aa13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 PTPRKQ15262 1439 aa13.81□□□□□ -0.2
AMBRA1-201ENST00000314845 LRRC59Q96AG4 307 aaKnown RBP13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 HDAC9Q9UKV0 1011 aa13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 CHMP4BP1P59074 171 aa13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 ANAPC15P60006 121 aa13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 C8orf37Q96NL8 207 aa13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 LARP6Q9BRS8 491 aaKnown RBP13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 GBP3Q9H0R5 595 aa13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 SOS1Q07889 1333 aaPredicted RBP13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 KLF18A0A0U1RQI7 1052 aa13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 ZBTB43O43298 467 aa13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 NAA16Q6N069 864 aaPredicted RBP13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 CCDC144CPQ8IYA2 1237 aa13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 OGFOD1Q8N543 542 aa13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 CCDC150Q8NCX0 1101 aa13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 IBSPP21815 317 aaPredicted RBP13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 PTPN14Q15678 1187 aa13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 MCMDC2Q4G0Z9 681 aa13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 CCDC102BQ68D86 513 aa13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 CKAP2LQ8IYA6 745 aa13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 TBC1D32Q96NH3 1257 aa13.8□□□□□ -0.2
AMBRA1-201ENST00000314845 TRPM2O94759 1503 aa13.79□□□□□ -0.2
AMBRA1-201ENST00000314845 KIF5CO60282 957 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms