RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 DDX10Q13206 875 aaKnown RBP10.71□□□□□ -0.69
TPM3-203ENST00000312970 KIF6Q6ZMV9 814 aa10.71□□□□□ -0.69
TPM3-203ENST00000312970 SLX4Q8IY92 1834 aa10.71□□□□□ -0.69
TPM3-203ENST00000312970 NYXQ9GZU5 481 aa10.71□□□□□ -0.69
TPM3-203ENST00000312970 BABAM1Q9NWV8 329 aa10.71□□□□□ -0.69
TPM3-203ENST00000312970 MAP3K15Q6ZN16 1313 aa10.7□□□□□ -0.7
TPM3-203ENST00000312970 FOXN1O15353 648 aa10.7□□□□□ -0.7
TPM3-203ENST00000312970 CCDC93Q567U6 631 aa10.7□□□□□ -0.7
TPM3-203ENST00000312970 TTLL7Q6ZT98 887 aa10.7□□□□□ -0.7
TPM3-203ENST00000312970 RTKN2Q8IZC4 609 aa10.7□□□□□ -0.7
TPM3-203ENST00000312970 MKRN1Q9UHC7 482 aaKnown RBP10.7□□□□□ -0.7
TPM3-203ENST00000312970 TSPYL4Q9UJ04 414 aa10.7□□□□□ -0.7
TPM3-203ENST00000312970 ERBB4Q15303 1308 aa10.69□□□□□ -0.7
TPM3-203ENST00000312970 DDNO94850 711 aaPredicted RBP10.69□□□□□ -0.7
TPM3-203ENST00000312970 TMPOP42166 694 aaKnown RBP10.69□□□□□ -0.7
TPM3-203ENST00000312970 LMOD3Q0VAK6 560 aa10.69□□□□□ -0.7
TPM3-203ENST00000312970 KDM3BQ7LBC6 1761 aa10.68□□□□□ -0.7
TPM3-203ENST00000312970 EIF2S2P20042 333 aaKnown RBP10.68□□□□□ -0.7
TPM3-203ENST00000312970 FKBP4Q02790 459 aaKnown RBP eCLIP10.68□□□□□ -0.7
TPM3-203ENST00000312970 GIGYF2Q6Y7W6 1299 aaKnown RBP10.68□□□□□ -0.7
TPM3-203ENST00000312970 NUTM1Q86Y26 1132 aa10.68□□□□□ -0.7
TPM3-203ENST00000312970 ZNF34Q8IZ26 560 aa10.68□□□□□ -0.7
TPM3-203ENST00000312970 ZBTB3Q9H5J0 574 aa10.68□□□□□ -0.7
TPM3-203ENST00000312970 MYBBP1AQ9BQG0 1328 aaKnown RBP10.67□□□□□ -0.7
TPM3-203ENST00000312970 POTEIP0CG38 1075 aa10.67□□□□□ -0.7
TPM3-203ENST00000312970 POTEJP0CG39 1038 aa10.67□□□□□ -0.7
TPM3-203ENST00000312970 GPTP24298 496 aa10.67□□□□□ -0.7
TPM3-203ENST00000312970 PDIA6Q15084 440 aa10.67□□□□□ -0.7
TPM3-203ENST00000312970 NEUROD2Q15784 382 aa10.67□□□□□ -0.7
TPM3-203ENST00000312970 CRY2Q49AN0 593 aa10.67□□□□□ -0.7
TPM3-203ENST00000312970 SUSD4Q5VX71 490 aa10.67□□□□□ -0.7
TPM3-203ENST00000312970 PPP1R42Q7Z4L9 355 aa10.67□□□□□ -0.7
TPM3-203ENST00000312970 SCN4AP35499 1836 aa10.67□□□□□ -0.7
TPM3-203ENST00000312970 LAMB4A4D0S4 1761 aa10.67□□□□□ -0.7
TPM3-203ENST00000312970 TNRC18O15417 2968 aaPredicted RBP10.66□□□□□ -0.7
TPM3-203ENST00000312970 NUP98P52948 1817 aa10.66□□□□□ -0.7
TPM3-203ENST00000312970 HOXA10P31260 410 aaPredicted RBP10.66□□□□□ -0.7
TPM3-203ENST00000312970 WDR43Q15061 677 aaKnown RBP eCLIP10.66□□□□□ -0.7
TPM3-203ENST00000312970 PARP10Q53GL7 1025 aa10.66□□□□□ -0.7
TPM3-203ENST00000312970 CC2D2BQ6DHV5 1058 aa10.66□□□□□ -0.7
TPM3-203ENST00000312970 OLFM4Q6UX06 510 aa10.66□□□□□ -0.7
TPM3-203ENST00000312970 SYNE4Q8N205 404 aa10.66□□□□□ -0.7
TPM3-203ENST00000312970 RPGRQ92834 1020 aaKnown RBP10.66□□□□□ -0.7
TPM3-203ENST00000312970 RUNDC1Q96C34 613 aa10.66□□□□□ -0.7
TPM3-203ENST00000312970 PRDM10Q9NQV6 1147 aa10.66□□□□□ -0.7
TPM3-203ENST00000312970 ZNF277Q9NRM2 450 aaPredicted RBP10.66□□□□□ -0.7
TPM3-203ENST00000312970 CREBZFQ9NS37 354 aa10.66□□□□□ -0.7
TPM3-203ENST00000312970 UBN2Q6ZU65 1347 aa10.65□□□□□ -0.7
TPM3-203ENST00000312970 IQCA1LA6NCM1 817 aa10.65□□□□□ -0.7
TPM3-203ENST00000312970 CHL1O00533 1208 aa10.65□□□□□ -0.7
TPM3-203ENST00000312970 IARSP41252 1262 aaKnown RBP10.65□□□□□ -0.7
TPM3-203ENST00000312970 GRIPAP1Q4V328 841 aa10.65□□□□□ -0.7
TPM3-203ENST00000312970 CHADLQ6NUI6 762 aa10.65□□□□□ -0.7
TPM3-203ENST00000312970 LRP10Q7Z4F1 713 aa10.65□□□□□ -0.7
TPM3-203ENST00000312970 CCDC146Q8IYE0 955 aa10.65□□□□□ -0.7
TPM3-203ENST00000312970 RBM17Q96I25 401 aaKnown RBP10.65□□□□□ -0.7
TPM3-203ENST00000312970 NLRP3Q96P20 1036 aa10.65□□□□□ -0.7
TPM3-203ENST00000312970 CRAMP1Q96RY5 1269 aa10.65□□□□□ -0.7
TPM3-203ENST00000312970 PSMD1Q99460 953 aa10.65□□□□□ -0.7
TPM3-203ENST00000312970 ADAMTS8Q9UP79 889 aa10.65□□□□□ -0.7
TPM3-203ENST00000312970 IBTKQ9P2D0 1353 aaPredicted RBP10.65□□□□□ -0.71
TPM3-203ENST00000312970 NTSR2O95665 410 aa10.64□□□□□ -0.71
TPM3-203ENST00000312970 VEGFBP49765 207 aa10.64□□□□□ -0.71
TPM3-203ENST00000312970 FAM161AQ3B820 660 aa10.64□□□□□ -0.71
TPM3-203ENST00000312970 SLC10A5Q5PT55 438 aa10.64□□□□□ -0.71
TPM3-203ENST00000312970 COPS6Q7L5N1 327 aa10.64□□□□□ -0.71
TPM3-203ENST00000312970 JDP2Q8WYK2 163 aa10.64□□□□□ -0.71
TPM3-203ENST00000312970 NECTIN2Q92692 538 aa10.64□□□□□ -0.71
TPM3-203ENST00000312970 L3MBTL3Q96JM7 780 aaPredicted RBP10.64□□□□□ -0.71
TPM3-203ENST00000312970 UTP14AQ9BVJ6 771 aaKnown RBP10.64□□□□□ -0.71
TPM3-203ENST00000312970 TRIM35Q9UPQ4 493 aa10.64□□□□□ -0.71
TPM3-203ENST00000312970 LAS1LQ9Y4W2 734 aaKnown RBP10.64□□□□□ -0.71
TPM3-203ENST00000312970 ABCC12Q96J65 1359 aa10.64□□□□□ -0.71
TPM3-203ENST00000312970 FZD9O00144 591 aa10.63□□□□□ -0.71
TPM3-203ENST00000312970 ANXA1P04083 346 aa10.63□□□□□ -0.71
TPM3-203ENST00000312970 CTCFP49711 727 aaPredicted RBP10.63□□□□□ -0.71
TPM3-203ENST00000312970 LBX1P52954 281 aa10.63□□□□□ -0.71
TPM3-203ENST00000312970 AIMP1Q12904 312 aaKnown RBP10.63□□□□□ -0.71
TPM3-203ENST00000312970 PROSER3Q2NL68 480 aa10.63□□□□□ -0.71
TPM3-203ENST00000312970 HSP90AB3PQ58FF7 597 aa10.63□□□□□ -0.71
TPM3-203ENST00000312970 TMX4Q9H1E5 349 aaPredicted RBP10.63□□□□□ -0.71
TPM3-203ENST00000312970 TAF1DQ9H5J8 278 aaPredicted RBP10.63□□□□□ -0.71
TPM3-203ENST00000312970 DDX21Q9NR30 783 aaKnown RBP eCLIP10.63□□□□□ -0.71
TPM3-203ENST00000312970 CNTNAP1P78357 1384 aa10.63□□□□□ -0.71
TPM3-203ENST00000312970 RIC1Q4ADV7 1423 aa10.62□□□□□ -0.71
TPM3-203ENST00000312970 TCIRG1Q13488 830 aa10.62□□□□□ -0.71
TPM3-203ENST00000312970 LDHDQ86WU2 507 aa10.62□□□□□ -0.71
TPM3-203ENST00000312970 XAGE3Q8WTP9 111 aa10.62□□□□□ -0.71
TPM3-203ENST00000312970 ABHD8Q96I13 439 aa10.62□□□□□ -0.71
TPM3-203ENST00000312970 RNF39Q9H2S5 420 aa10.62□□□□□ -0.71
TPM3-203ENST00000312970 WBP1LQ9NX94 342 aa10.62□□□□□ -0.71
TPM3-203ENST00000312970 HACL1Q9UJ83 578 aa10.62□□□□□ -0.71
TPM3-203ENST00000312970 RNF123Q5XPI4 1314 aa10.61□□□□□ -0.71
TPM3-203ENST00000312970 PASKQ96RG2 1323 aa10.61□□□□□ -0.71
TPM3-203ENST00000312970 ZNF541Q9H0D2 1346 aa10.61□□□□□ -0.71
TPM3-203ENST00000312970 TCERG1O14776 1098 aaKnown RBP10.61□□□□□ -0.71
TPM3-203ENST00000312970 PPEF1O14829 653 aaPredicted RBP10.61□□□□□ -0.71
TPM3-203ENST00000312970 EIF6P56537 245 aaKnown RBP10.61□□□□□ -0.71
TPM3-203ENST00000312970 C3orf67Q6ZVT6 689 aa10.61□□□□□ -0.71
TPM3-203ENST00000312970 PNMA8AQ86V59 439 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms