RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 CASQ1P31415 396 aa17.71■□□□□ 0.43
KDM3A-201ENST00000312912 ESYT1Q9BSJ8 1104 aa17.71■□□□□ 0.43
KDM3A-201ENST00000312912 WDR7Q9Y4E6 1490 aa17.71■□□□□ 0.43
KDM3A-201ENST00000312912 GOLIM4O00461 696 aa17.71■□□□□ 0.43
KDM3A-201ENST00000312912 WWC2Q6AWC2 1192 aa17.71■□□□□ 0.43
KDM3A-201ENST00000312912 MICALCLQ6ZW33 695 aa17.71■□□□□ 0.43
KDM3A-201ENST00000312912 TRMT1Q9NXH9 659 aaKnown RBP17.71■□□□□ 0.43
KDM3A-201ENST00000312912 SEC63Q9UGP8 760 aaKnown RBP17.71■□□□□ 0.43
KDM3A-201ENST00000312912 TTF1Q15361 905 aaPredicted RBP17.7■□□□□ 0.42
KDM3A-201ENST00000312912 SEPT7Q16181 437 aaKnown RBP17.7■□□□□ 0.42
KDM3A-201ENST00000312912 ZSCAN29Q8IWY8 852 aaPredicted RBP17.7■□□□□ 0.42
KDM3A-201ENST00000312912 TRMT112Q9UI30 125 aaKnown RBP17.7■□□□□ 0.42
KDM3A-201ENST00000312912 ZNF76P36508 570 aa17.7■□□□□ 0.42
KDM3A-201ENST00000312912 SMC5Q8IY18 1101 aa17.7■□□□□ 0.42
KDM3A-201ENST00000312912 CCDC82Q8N4S0 544 aa17.7■□□□□ 0.42
KDM3A-201ENST00000312912 MRPL50Q8N5N7 158 aaKnown RBP17.7■□□□□ 0.42
KDM3A-201ENST00000312912 TSHZ3Q63HK5 1081 aa17.7■□□□□ 0.42
KDM3A-201ENST00000312912 CNKSR2Q8WXI2 1034 aa17.7■□□□□ 0.42
KDM3A-201ENST00000312912 ADAMTS2O95450 1211 aa17.7■□□□□ 0.42
KDM3A-201ENST00000312912 USP5P45974 858 aa17.7■□□□□ 0.42
KDM3A-201ENST00000312912 NOLC1Q14978 699 aaKnown RBP eCLIP17.7■□□□□ 0.42
KDM3A-201ENST00000312912 ACEP12821 1306 aa17.69■□□□□ 0.42
KDM3A-201ENST00000312912 RANBP6O60518 1105 aaKnown RBP17.69■□□□□ 0.42
KDM3A-201ENST00000312912 PLCH2O75038 1416 aa17.69■□□□□ 0.42
KDM3A-201ENST00000312912 PRAG1Q86YV5 1406 aa17.69■□□□□ 0.42
KDM3A-201ENST00000312912 ATP8B2P98198 1209 aa17.69■□□□□ 0.42
KDM3A-201ENST00000312912 CCDC102BQ68D86 513 aa17.69■□□□□ 0.42
KDM3A-201ENST00000312912 KANK3Q6NY19 840 aa17.69■□□□□ 0.42
KDM3A-201ENST00000312912 UBE3BQ7Z3V4 1068 aa17.69■□□□□ 0.42
KDM3A-201ENST00000312912 IFNL2Q8IZJ0 200 aa17.69■□□□□ 0.42
KDM3A-201ENST00000312912 TESK2Q96S53 571 aa17.69■□□□□ 0.42
KDM3A-201ENST00000312912 TEX13AQ9BXU3 409 aaPredicted RBP17.69■□□□□ 0.42
KDM3A-201ENST00000312912 YEATS4O95619 227 aa17.69■□□□□ 0.42
KDM3A-201ENST00000312912 ANKRD18AQ8IVF6 992 aa17.69■□□□□ 0.42
KDM3A-201ENST00000312912 USO1O60763 962 aaKnown RBP17.68■□□□□ 0.42
KDM3A-201ENST00000312912 PAFAH1B1P43034 410 aa17.68■□□□□ 0.42
KDM3A-201ENST00000312912 TMC6Q7Z403 805 aa17.68■□□□□ 0.42
KDM3A-201ENST00000312912 SEPT11Q9NVA2 429 aaKnown RBP17.68■□□□□ 0.42
KDM3A-201ENST00000312912 CCDC194A0A1B0GVG4 234 aa17.68■□□□□ 0.42
KDM3A-201ENST00000312912 POLR3DP05423 398 aaPredicted RBP17.68■□□□□ 0.42
KDM3A-201ENST00000312912 LDHAL6AQ6ZMR3 332 aa17.68■□□□□ 0.42
KDM3A-201ENST00000312912 CACNA2D4Q7Z3S7 1137 aa17.68■□□□□ 0.42
KDM3A-201ENST00000312912 PYM1Q9BRP8 204 aaKnown RBP17.68■□□□□ 0.42
KDM3A-201ENST00000312912 DCTPP1Q9H773 170 aa17.68■□□□□ 0.42
KDM3A-201ENST00000312912 RBM5P52756 815 aaKnown RBP eCLIP17.68■□□□□ 0.42
KDM3A-201ENST00000312912 GABPB1Q06547 395 aaPredicted RBP17.68■□□□□ 0.42
KDM3A-201ENST00000312912 NCOA7Q8NI08 942 aa17.68■□□□□ 0.42
KDM3A-201ENST00000312912 TSG101Q99816 390 aa17.68■□□□□ 0.42
KDM3A-201ENST00000312912 CWC25Q9NXE8 425 aaPredicted RBP17.68■□□□□ 0.42
KDM3A-201ENST00000312912 ALDH1L1O75891 902 aa17.67■□□□□ 0.42
KDM3A-201ENST00000312912 CATIPQ7Z7H3 387 aa17.67■□□□□ 0.42
KDM3A-201ENST00000312912 VPS36Q86VN1 386 aa17.67■□□□□ 0.42
KDM3A-201ENST00000312912 TAX1BP1Q86VP1 789 aa17.67■□□□□ 0.42
KDM3A-201ENST00000312912 THOC2Q8NI27 1593 aaKnown RBP17.67■□□□□ 0.42
KDM3A-201ENST00000312912 BIN1O00499 593 aa17.67■□□□□ 0.42
KDM3A-201ENST00000312912 GIMAP6Q6P9H5 292 aa17.67■□□□□ 0.42
KDM3A-201ENST00000312912 BICDL1Q6ZP65 573 aa17.67■□□□□ 0.42
KDM3A-201ENST00000312912 CCDC150Q8NCX0 1101 aa17.67■□□□□ 0.42
KDM3A-201ENST00000312912 FAM200AQ8TCP9 573 aa17.67■□□□□ 0.42
KDM3A-201ENST00000312912 BRF1Q92994 677 aa17.67■□□□□ 0.42
KDM3A-201ENST00000312912 RBM28Q9NW13 759 aaKnown RBP17.67■□□□□ 0.42
KDM3A-201ENST00000312912 ZNF444Q8N0Y2 327 aaPredicted RBP17.66■□□□□ 0.42
KDM3A-201ENST00000312912 C8orf58Q8NAV2 365 aa17.66■□□□□ 0.42
KDM3A-201ENST00000312912 POTEB2H3BUK9 544 aa17.66■□□□□ 0.42
KDM3A-201ENST00000312912 ANKRD13DQ6ZTN6 518 aa17.66■□□□□ 0.42
KDM3A-201ENST00000312912 C10orf67Q8IYJ2 551 aa17.66■□□□□ 0.42
KDM3A-201ENST00000312912 SNRPA1P09661 255 aaKnown RBP17.66■□□□□ 0.42
KDM3A-201ENST00000312912 NLRP5P59047 1200 aa17.66■□□□□ 0.42
KDM3A-201ENST00000312912 SNW1Q13573 536 aaKnown RBP17.66■□□□□ 0.42
KDM3A-201ENST00000312912 TTC21AQ8NDW8 1320 aa17.66■□□□□ 0.42
KDM3A-201ENST00000312912 ZFYP08048 801 aaPredicted RBP17.66■□□□□ 0.42
KDM3A-201ENST00000312912 TMEM67Q5HYA8 995 aa17.66■□□□□ 0.42
KDM3A-201ENST00000312912 ZBTB3Q9H5J0 574 aa17.66■□□□□ 0.42
KDM3A-201ENST00000312912 ZBTB40Q9NUA8 1239 aa17.66■□□□□ 0.42
KDM3A-201ENST00000312912 ZNF518AQ6AHZ1 1483 aa17.65■□□□□ 0.42
KDM3A-201ENST00000312912 CETN2P41208 172 aa17.65■□□□□ 0.42
KDM3A-201ENST00000312912 DHX37Q8IY37 1157 aaKnown RBP17.65■□□□□ 0.42
KDM3A-201ENST00000312912 ZNF526Q8TF50 670 aaPredicted RBP17.65■□□□□ 0.42
KDM3A-201ENST00000312912 NUP88Q99567 741 aaPredicted RBP17.65■□□□□ 0.42
KDM3A-201ENST00000312912 PIK3C2GO75747 1445 aa17.65■□□□□ 0.42
KDM3A-201ENST00000312912 UGGT2Q9NYU1 1516 aa17.65■□□□□ 0.42
KDM3A-201ENST00000312912 TMEM266Q2M3C6 531 aa17.65■□□□□ 0.42
KDM3A-201ENST00000312912 DZIP1Q86YF9 867 aaKnown RBP17.65■□□□□ 0.42
KDM3A-201ENST00000312912 A0A1B0GUL7 405 aa17.65■□□□□ 0.42
KDM3A-201ENST00000312912 VAMP4O75379 141 aa17.65■□□□□ 0.42
KDM3A-201ENST00000312912 SARNPP82979 210 aaKnown RBP17.65■□□□□ 0.42
KDM3A-201ENST00000312912 BIVM-ERCC5R4GMW8 1640 aa17.65■□□□□ 0.42
KDM3A-201ENST00000312912 CPLX3Q8WVH0 158 aa17.65■□□□□ 0.42
KDM3A-201ENST00000312912 SNRKQ9NRH2 765 aa17.65■□□□□ 0.42
KDM3A-201ENST00000312912 RBM8AQ9Y5S9 174 aaKnown RBP17.65■□□□□ 0.42
KDM3A-201ENST00000312912 KDM5BQ9UGL1 1544 aa17.64■□□□□ 0.41
KDM3A-201ENST00000312912 RLBP1P12271 317 aa17.64■□□□□ 0.41
KDM3A-201ENST00000312912 METAP2P50579 478 aaKnown RBP eCLIP17.64■□□□□ 0.41
KDM3A-201ENST00000312912 RAB3GAP1Q15042 981 aa17.64■□□□□ 0.41
KDM3A-201ENST00000312912 ENOX2Q16206 610 aaKnown RBP17.64■□□□□ 0.41
KDM3A-201ENST00000312912 USP48Q86UV5 1035 aa17.64■□□□□ 0.41
KDM3A-201ENST00000312912 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.64■□□□□ 0.41
KDM3A-201ENST00000312912 CCDC171Q6TFL3 1326 aa17.64■□□□□ 0.41
KDM3A-201ENST00000312912 ATP5J2-PTCD1G3V325 749 aa17.64■□□□□ 0.41
KDM3A-201ENST00000312912 BRD2P25440 801 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms