RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 CCNL1Q9UK58 526 aaPredicted RBP17.25■□□□□ 0.35
RAB40A-201ENST00000304236 ALDH1L1O75891 902 aa17.24■□□□□ 0.35
RAB40A-201ENST00000304236 KLHL40Q2TBA0 621 aa17.24■□□□□ 0.35
RAB40A-201ENST00000304236 TSHZ3Q63HK5 1081 aa17.24■□□□□ 0.35
RAB40A-201ENST00000304236 MPRIPQ6WCQ1 1025 aa17.24■□□□□ 0.35
RAB40A-201ENST00000304236 ARXQ96QS3 562 aa17.24■□□□□ 0.35
RAB40A-201ENST00000304236 SYT17Q9BSW7 474 aa17.24■□□□□ 0.35
RAB40A-201ENST00000304236 SRGAP3O43295 1099 aa17.24■□□□□ 0.35
RAB40A-201ENST00000304236 KCNQ3O43525 872 aa17.23■□□□□ 0.35
RAB40A-201ENST00000304236 HMGB2P26583 209 aaKnown RBP17.23■□□□□ 0.35
RAB40A-201ENST00000304236 NEK4P51957 841 aa17.23■□□□□ 0.35
RAB40A-201ENST00000304236 MTX1Q13505 466 aa17.22■□□□□ 0.35
RAB40A-201ENST00000304236 ANO2Q9NQ90 1003 aa17.22■□□□□ 0.35
RAB40A-201ENST00000304236 AK9Q5TCS8 1911 aa17.22■□□□□ 0.35
RAB40A-201ENST00000304236 HEG1Q9ULI3 1381 aa17.22■□□□□ 0.35
RAB40A-201ENST00000304236 PNPLA7Q6ZV29 1317 aa17.22■□□□□ 0.35
RAB40A-201ENST00000304236 CYP27B1O15528 508 aa17.22■□□□□ 0.35
RAB40A-201ENST00000304236 IL1RAPL2Q9NP60 686 aa17.22■□□□□ 0.35
RAB40A-201ENST00000304236 SPG7Q9UQ90 795 aa17.22■□□□□ 0.35
RAB40A-201ENST00000304236 ADCY9O60503 1353 aa17.22■□□□□ 0.35
RAB40A-201ENST00000304236 GIGYF1O75420 1035 aaPredicted RBP17.21■□□□□ 0.35
RAB40A-201ENST00000304236 NBPF7P0C2Y1 421 aaPredicted RBP17.21■□□□□ 0.35
RAB40A-201ENST00000304236 KSR2Q6VAB6 950 aa17.21■□□□□ 0.35
RAB40A-201ENST00000304236 DDX49Q9Y6V7 483 aaKnown RBP17.21■□□□□ 0.35
RAB40A-201ENST00000304236 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.35
RAB40A-201ENST00000304236 POLD1P28340 1107 aa17.2■□□□□ 0.34
RAB40A-201ENST00000304236 CUL4AQ13619 759 aa17.2■□□□□ 0.34
RAB40A-201ENST00000304236 INTS4Q96HW7 963 aaKnown RBP17.2■□□□□ 0.34
RAB40A-201ENST00000304236 HYPKQ9NX55 129 aa17.2■□□□□ 0.34
RAB40A-201ENST00000304236 SIPA1L3O60292 1781 aaPredicted RBP17.2■□□□□ 0.34
RAB40A-201ENST00000304236 NUTM1Q86Y26 1132 aa17.2■□□□□ 0.34
RAB40A-201ENST00000304236 CNTROBQ8N137 903 aa17.2■□□□□ 0.34
RAB40A-201ENST00000304236 TMX3Q96JJ7 454 aa17.2■□□□□ 0.34
RAB40A-201ENST00000304236 LY75O60449 1722 aa17.2■□□□□ 0.34
RAB40A-201ENST00000304236 TTC41PQ6P2S7 1318 aa17.2■□□□□ 0.34
RAB40A-201ENST00000304236 ADAMTS7Q9UKP4 1686 aa17.19■□□□□ 0.34
RAB40A-201ENST00000304236 PI4K2BQ8TCG2 481 aa17.19■□□□□ 0.34
RAB40A-201ENST00000304236 MCTP1Q6DN14 999 aa17.19■□□□□ 0.34
RAB40A-201ENST00000304236 ERC1Q8IUD2 1116 aa17.19■□□□□ 0.34
RAB40A-201ENST00000304236 ZGPATQ8N5A5 531 aaKnown RBP17.19■□□□□ 0.34
RAB40A-201ENST00000304236 SMARCC1Q92922 1105 aaPredicted RBP17.19■□□□□ 0.34
RAB40A-201ENST00000304236 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.19■□□□□ 0.34
RAB40A-201ENST00000304236 DDX58O95786 925 aaKnown RBP17.18■□□□□ 0.34
RAB40A-201ENST00000304236 NKX1-1Q15270 411 aaPredicted RBP17.18■□□□□ 0.34
RAB40A-201ENST00000304236 PANK2Q9BZ23 570 aa17.18■□□□□ 0.34
RAB40A-201ENST00000304236 C9orf78Q9NZ63 289 aaPredicted RBP17.18■□□□□ 0.34
RAB40A-201ENST00000304236 QSER1Q2KHR3 1735 aa17.18■□□□□ 0.34
RAB40A-201ENST00000304236 PALLDQ8WX93 1383 aa17.17■□□□□ 0.34
RAB40A-201ENST00000304236 HSPA4P34932 840 aa17.17■□□□□ 0.34
RAB40A-201ENST00000304236 LMBRD1Q9NUN5 540 aa17.17■□□□□ 0.34
RAB40A-201ENST00000304236 MAP3K2Q9Y2U5 619 aa17.17■□□□□ 0.34
RAB40A-201ENST00000304236 GLRX3O76003 335 aaKnown RBP17.17■□□□□ 0.34
RAB40A-201ENST00000304236 OS9Q13438 667 aaPredicted RBP17.17■□□□□ 0.34
RAB40A-201ENST00000304236 PALD1Q9ULE6 856 aa17.17■□□□□ 0.34
RAB40A-201ENST00000304236 SGSM2O43147 1006 aa17.16■□□□□ 0.34
RAB40A-201ENST00000304236 ANXA1P04083 346 aa17.16■□□□□ 0.34
RAB40A-201ENST00000304236 CLASRPQ8N2M8 674 aaKnown RBP17.16■□□□□ 0.34
RAB40A-201ENST00000304236 GPATCH3Q96I76 525 aa17.16■□□□□ 0.34
RAB40A-201ENST00000304236 PLEKHG2Q9H7P9 1386 aa17.16■□□□□ 0.34
RAB40A-201ENST00000304236 GAS2L3Q86XJ1 694 aa17.15■□□□□ 0.34
RAB40A-201ENST00000304236 LINS1Q8NG48 757 aa17.15■□□□□ 0.34
RAB40A-201ENST00000304236 DDX21Q9NR30 783 aaKnown RBP eCLIP17.15■□□□□ 0.34
RAB40A-201ENST00000304236 ZDHHC9Q9Y397 364 aa17.15■□□□□ 0.34
RAB40A-201ENST00000304236 PKD1L3Q7Z443 1732 aa17.15■□□□□ 0.34
RAB40A-201ENST00000304236 ZNF445P59923 1031 aa17.15■□□□□ 0.34
RAB40A-201ENST00000304236 PKP1Q13835 747 aa17.15■□□□□ 0.34
RAB40A-201ENST00000304236 COL23A1Q86Y22 540 aaPredicted RBP17.15■□□□□ 0.34
RAB40A-201ENST00000304236 KLHL34Q8N239 644 aa17.15■□□□□ 0.34
RAB40A-201ENST00000304236 UTYO14607 1347 aa17.15■□□□□ 0.34
RAB40A-201ENST00000304236 RAD50Q92878 1312 aa17.15■□□□□ 0.34
RAB40A-201ENST00000304236 IFNL2Q8IZJ0 200 aa17.14■□□□□ 0.33
RAB40A-201ENST00000304236 FLAD1Q8NFF5 587 aa17.14■□□□□ 0.33
RAB40A-201ENST00000304236 RUFY2Q8WXA3 655 aa17.14■□□□□ 0.33
RAB40A-201ENST00000304236 PIGBQ92521 554 aa17.14■□□□□ 0.33
RAB40A-201ENST00000304236 KIAA1211Q6ZU35 1233 aa17.13■□□□□ 0.33
RAB40A-201ENST00000304236 BRD1O95696 1058 aa17.13■□□□□ 0.33
RAB40A-201ENST00000304236 PHKG2P15735 406 aa17.12■□□□□ 0.33
RAB40A-201ENST00000304236 PROSER3Q2NL68 480 aa17.12■□□□□ 0.33
RAB40A-201ENST00000304236 ECHDC1Q9NTX5 307 aa17.12■□□□□ 0.33
RAB40A-201ENST00000304236 TMOD3Q9NYL9 352 aa17.12■□□□□ 0.33
RAB40A-201ENST00000304236 SCN11AQ9UI33 1791 aa17.12■□□□□ 0.33
RAB40A-201ENST00000304236 GRM8O00222 908 aa17.11■□□□□ 0.33
RAB40A-201ENST00000304236 LSG1Q9H089 658 aaKnown RBP17.11■□□□□ 0.33
RAB40A-201ENST00000304236 PRPF40AO75400 957 aaKnown RBP17.11■□□□□ 0.33
RAB40A-201ENST00000304236 MAP4K4O95819 1239 aaPredicted RBP17.11■□□□□ 0.33
RAB40A-201ENST00000304236 IFIT2P09913 472 aaKnown RBP17.11■□□□□ 0.33
RAB40A-201ENST00000304236 GPR162Q16538 588 aa17.11■□□□□ 0.33
RAB40A-201ENST00000304236 TOGARAM1Q9Y4F4 1720 aa17.1■□□□□ 0.33
RAB40A-201ENST00000304236 MBD3O95983 291 aa17.1■□□□□ 0.33
RAB40A-201ENST00000304236 ZNF790Q6PG37 636 aa17.1■□□□□ 0.33
RAB40A-201ENST00000304236 ANP32BQ92688 251 aaKnown RBP17.1■□□□□ 0.33
RAB40A-201ENST00000304236 AK7Q96M32 723 aa17.1■□□□□ 0.33
RAB40A-201ENST00000304236 SLC52A2Q9HAB3 445 aa17.1■□□□□ 0.33
RAB40A-201ENST00000304236 RRAGDQ9NQL2 400 aaPredicted RBP17.1■□□□□ 0.33
RAB40A-201ENST00000304236 COL24A1Q17RW2 1714 aa17.1■□□□□ 0.33
RAB40A-201ENST00000304236 C5P01031 1676 aa17.1■□□□□ 0.33
RAB40A-201ENST00000304236 NCLP19338 710 aaKnown RBP17.09■□□□□ 0.33
RAB40A-201ENST00000304236 IL25Q9H293 177 aa17.09■□□□□ 0.33
RAB40A-201ENST00000304236 DIAPH3Q9NSV4 1193 aa17.09■□□□□ 0.33
RAB40A-201ENST00000304236 ITGB4P16144 1822 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms