RNA–Protein interactions for RNA: ENST00000302979.4

POLR1D-201, Transcript of RNA polymerase I and III subunit D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR1D, Length 1,166 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-201ENST00000302979 MYD88Q99836 296 aa33.59■■■□□ 2.97
POLR1D-201ENST00000302979 DDX60Q8IY21 1712 aaKnown RBP33.59■■■□□ 2.97
POLR1D-201ENST00000302979 LAMB2P55268 1798 aa33.58■■■□□ 2.97
POLR1D-201ENST00000302979 TRIM28Q13263 835 aaKnown RBP33.58■■■□□ 2.97
POLR1D-201ENST00000302979 ALDH1L2Q3SY69 923 aa33.58■■■□□ 2.97
POLR1D-201ENST00000302979 RNF123Q5XPI4 1314 aa33.57■■■□□ 2.97
POLR1D-201ENST00000302979 UTP14AQ9BVJ6 771 aaKnown RBP33.57■■■□□ 2.96
POLR1D-201ENST00000302979 BCL2L13Q9BXK5 485 aa33.57■■■□□ 2.96
POLR1D-201ENST00000302979 IGKV5-2P06315 115 aa33.55■■■□□ 2.96
POLR1D-201ENST00000302979 PDE6BP35913 854 aa33.55■■■□□ 2.96
POLR1D-201ENST00000302979 WWC3Q9ULE0 1092 aa33.55■■■□□ 2.96
POLR1D-201ENST00000302979 ARFGEF1Q9Y6D6 1849 aa33.55■■■□□ 2.96
POLR1D-201ENST00000302979 KLRG2A4D1S0 409 aaPredicted RBP33.54■■■□□ 2.96
POLR1D-201ENST00000302979 YBX3P16989 372 aaKnown RBP eCLIP33.54■■■□□ 2.963e-11■□□□□ 9.5
POLR1D-201ENST00000302979 GTF2E1P29083 439 aaPredicted RBP33.54■■■□□ 2.96
POLR1D-201ENST00000302979 C2CD5Q86YS7 1000 aa33.54■■■□□ 2.96
POLR1D-201ENST00000302979 DNAAF4Q8WXU2 420 aa33.53■■■□□ 2.96
POLR1D-201ENST00000302979 RARSP54136 660 aaKnown RBP33.52■■■□□ 2.96
POLR1D-201ENST00000302979 SYNE4Q8N205 404 aa33.52■■■□□ 2.96
POLR1D-201ENST00000302979 SMC4Q9NTJ3 1288 aa33.52■■■□□ 2.96
POLR1D-201ENST00000302979 CACNA1SQ13698 1873 aa33.52■■■□□ 2.96
POLR1D-201ENST00000302979 UTRNP46939 3433 aa33.51■■■□□ 2.96
POLR1D-201ENST00000302979 F6X3S4 739 aa33.51■■■□□ 2.95
POLR1D-201ENST00000302979 CCDC191Q8NCU4 936 aa33.51■■■□□ 2.95
POLR1D-201ENST00000302979 TRMT112Q9UI30 125 aaKnown RBP33.51■■■□□ 2.95
POLR1D-201ENST00000302979 PDZRN3Q9UPQ7 1066 aa33.51■■■□□ 2.95
POLR1D-201ENST00000302979 SH3TC1Q8TE82 1336 aa33.51■■■□□ 2.95
POLR1D-201ENST00000302979 H0YIN7 160 aa33.5■■■□□ 2.95
POLR1D-201ENST00000302979 SRGNP10124 158 aa33.49■■■□□ 2.95
POLR1D-201ENST00000302979 BRPF1P55201 1214 aaPredicted RBP33.49■■■□□ 2.95
POLR1D-201ENST00000302979 SLC10A5Q5PT55 438 aa33.49■■■□□ 2.95
POLR1D-201ENST00000302979 PELP1Q8IZL8 1130 aaKnown RBP33.49■■■□□ 2.95
POLR1D-201ENST00000302979 PIM2Q9P1W9 311 aa33.49■■■□□ 2.95
POLR1D-201ENST00000302979 NEURL1BA8MQ27 555 aa33.48■■■□□ 2.95
POLR1D-201ENST00000302979 NEXNQ0ZGT2 675 aa33.48■■■□□ 2.95
POLR1D-201ENST00000302979 CWF19L2Q2TBE0 894 aaKnown RBP33.48■■■□□ 2.95
POLR1D-201ENST00000302979 CRY2Q49AN0 593 aa33.48■■■□□ 2.95
POLR1D-201ENST00000302979 C3orf67Q6ZVT6 689 aa33.48■■■□□ 2.95
POLR1D-201ENST00000302979 CWC25Q9NXE8 425 aaPredicted RBP33.48■■■□□ 2.95
POLR1D-201ENST00000302979 PTPRCP08575 1304 aa33.48■■■□□ 2.95
POLR1D-201ENST00000302979 GPR162Q16538 588 aa33.47■■■□□ 2.95
POLR1D-201ENST00000302979 FAM89AQ96GI7 184 aa33.47■■■□□ 2.95
POLR1D-201ENST00000302979 ZBTB38Q8NAP3 1195 aaPredicted RBP33.45■■■□□ 2.95
POLR1D-201ENST00000302979 BCS1LQ9Y276 419 aa33.45■■■□□ 2.95
POLR1D-201ENST00000302979 BEND3Q5T5X7 828 aa33.44■■■□□ 2.94
POLR1D-201ENST00000302979 LINS1Q8NG48 757 aa33.44■■■□□ 2.94
POLR1D-201ENST00000302979 SLX4Q8IY92 1834 aa33.44■■■□□ 2.94
POLR1D-201ENST00000302979 PCCAP05165 728 aaPredicted RBP33.43■■■□□ 2.94
POLR1D-201ENST00000302979 HCLS1P14317 486 aaPredicted RBP33.43■■■□□ 2.94
POLR1D-201ENST00000302979 DALRD3Q5D0E6 543 aaKnown RBP33.43■■■□□ 2.94
POLR1D-201ENST00000302979 STYK1Q6J9G0 422 aa33.43■■■□□ 2.94
POLR1D-201ENST00000302979 MASTLQ96GX5 879 aa33.43■■■□□ 2.94
POLR1D-201ENST00000302979 RTL5Q5HYW3 569 aaPredicted RBP33.42■■■□□ 2.94
POLR1D-201ENST00000302979 ZNF622Q969S3 477 aaKnown RBP eCLIP33.42■■■□□ 2.94
POLR1D-201ENST00000302979 NPR1P16066 1061 aa33.41■■■□□ 2.94
POLR1D-201ENST00000302979 TTLL6Q8N841 843 aa33.41■■■□□ 2.94
POLR1D-201ENST00000302979 DCAF8L1A6NGE4 600 aa33.4■■■□□ 2.94
POLR1D-201ENST00000302979 GCKRQ14397 625 aa33.4■■■□□ 2.94
POLR1D-201ENST00000302979 IRS4O14654 1257 aaPredicted RBP33.39■■■□□ 2.94
POLR1D-201ENST00000302979 JARID2Q92833 1246 aaPredicted RBP33.39■■■□□ 2.94
POLR1D-201ENST00000302979 NLRP3Q96P20 1036 aa33.39■■■□□ 2.94
POLR1D-201ENST00000302979 NOB1Q9ULX3 412 aaKnown RBP33.39■■■□□ 2.94
POLR1D-201ENST00000302979 KIF16BQ96L93 1317 aa33.38■■■□□ 2.93
POLR1D-201ENST00000302979 CDHR2Q9BYE9 1310 aa33.38■■■□□ 2.93
POLR1D-201ENST00000302979 BCAR3O75815 825 aa33.38■■■□□ 2.93
POLR1D-201ENST00000302979 MYH3P11055 1940 aa33.38■■■□□ 2.93
POLR1D-201ENST00000302979 SLC4A10Q6U841 1118 aa33.37■■■□□ 2.93
POLR1D-201ENST00000302979 YTHDC1Q96MU7 727 aaKnown RBP33.37■■■□□ 2.93
POLR1D-201ENST00000302979 GRIN3BO60391 1043 aa33.36■■■□□ 2.93
POLR1D-201ENST00000302979 HOXA10P31260 410 aaPredicted RBP33.36■■■□□ 2.93
POLR1D-201ENST00000302979 PRPF40BQ6NWY9 871 aaKnown RBP33.36■■■□□ 2.93
POLR1D-201ENST00000302979 CNKSR1Q969H4 720 aa33.36■■■□□ 2.93
POLR1D-201ENST00000302979 COL4A1P02462 1669 aa33.36■■■□□ 2.93
POLR1D-201ENST00000302979 H7C1W4 665 aa33.35■■■□□ 2.93
POLR1D-201ENST00000302979 CASP7P55210 303 aa33.35■■■□□ 2.93
POLR1D-201ENST00000302979 TAF1P21675 1872 aa33.34■■■□□ 2.93
POLR1D-201ENST00000302979 RPGRQ92834 1020 aaKnown RBP33.34■■■□□ 2.93
POLR1D-201ENST00000302979 CHD4Q14839 1912 aa33.34■■■□□ 2.93
POLR1D-201ENST00000302979 UBE3BQ7Z3V4 1068 aa33.33■■■□□ 2.93
POLR1D-201ENST00000302979 SRCIN1Q9C0H9 1055 aa33.33■■■□□ 2.93
POLR1D-201ENST00000302979 ALDH1L1O75891 902 aa33.32■■■□□ 2.92
POLR1D-201ENST00000302979 SF3B3Q15393 1217 aaKnown RBP33.31■■■□□ 2.92
POLR1D-201ENST00000302979 FER1L6Q2WGJ9 1857 aa33.31■■■□□ 2.92
POLR1D-201ENST00000302979 ARHGAP45Q92619 1136 aa33.3■■■□□ 2.92
POLR1D-201ENST00000302979 CRAMP1Q96RY5 1269 aa33.3■■■□□ 2.92
POLR1D-201ENST00000302979 API5Q9BZZ5 524 aaKnown RBP33.3■■■□□ 2.92
POLR1D-201ENST00000302979 ABCC4O15439 1325 aa33.29■■■□□ 2.92
POLR1D-201ENST00000302979 PDE8AO60658 829 aa33.29■■■□□ 2.92
POLR1D-201ENST00000302979 ALDH1B1P30837 517 aa33.29■■■□□ 2.92
POLR1D-201ENST00000302979 C7orf43Q8WVR3 580 aa33.29■■■□□ 2.92
POLR1D-201ENST00000302979 RBM17Q96I25 401 aaKnown RBP33.29■■■□□ 2.92
POLR1D-201ENST00000302979 SNED1Q8TER0 1413 aa33.28■■■□□ 2.92
POLR1D-201ENST00000302979 GRM8O00222 908 aa33.27■■■□□ 2.92
POLR1D-201ENST00000302979 C21orf2O43822 256 aa33.27■■■□□ 2.92
POLR1D-201ENST00000302979 HSP90B1P14625 803 aaKnown RBP33.27■■■□□ 2.92
POLR1D-201ENST00000302979 LRRC37AA6NMS7 1700 aa33.26■■■□□ 2.92
POLR1D-201ENST00000302979 TRIM27P14373 513 aa33.26■■■□□ 2.91
POLR1D-201ENST00000302979 PLA2G12BQ9BX93 195 aa33.26■■■□□ 2.91
POLR1D-201ENST00000302979 TNNQ9UQP3 1299 aa33.26■■■□□ 2.91
POLR1D-201ENST00000302979 CTSWP56202 376 aa33.25■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms