RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 CLEC4GQ6UXB4 293 aa13.51□□□□□ -0.25
VWA3A-201ENST00000299840 DZIP3Q86Y13 1208 aaKnown RBP13.51□□□□□ -0.25
VWA3A-201ENST00000299840 KIAA1551Q9HCM1 1747 aa13.51□□□□□ -0.25
VWA3A-201ENST00000299840 PIP4K2AP48426 406 aaPredicted RBP13.5□□□□□ -0.25
VWA3A-201ENST00000299840 PSEN1P49768 467 aa13.5□□□□□ -0.25
VWA3A-201ENST00000299840 FHDC1Q9C0D6 1143 aaPredicted RBP13.5□□□□□ -0.25
VWA3A-201ENST00000299840 TBC1D2BQ9UPU7 963 aa13.5□□□□□ -0.25
VWA3A-201ENST00000299840 CD2APQ9Y5K6 639 aa13.5□□□□□ -0.25
VWA3A-201ENST00000299840 SYT17Q9BSW7 474 aa13.5□□□□□ -0.25
VWA3A-201ENST00000299840 DDX21Q9NR30 783 aaKnown RBP eCLIP13.5□□□□□ -0.25
VWA3A-201ENST00000299840 ANKRD36CQ5JPF3 1778 aa13.5□□□□□ -0.25
VWA3A-201ENST00000299840 SENP3-EIF4A1A0A087X0R7 540 aa13.49□□□□□ -0.25
VWA3A-201ENST00000299840 ERVV-1B6SEH8 477 aa13.49□□□□□ -0.25
VWA3A-201ENST00000299840 EIF2S2P20042 333 aaKnown RBP13.49□□□□□ -0.25
VWA3A-201ENST00000299840 B4GALNT3Q6L9W6 998 aa13.49□□□□□ -0.25
VWA3A-201ENST00000299840 C8orf58Q8NAV2 365 aa13.49□□□□□ -0.25
VWA3A-201ENST00000299840 PARP3Q9Y6F1 533 aa13.49□□□□□ -0.25
VWA3A-201ENST00000299840 E9PSI1 815 aa13.49□□□□□ -0.25
VWA3A-201ENST00000299840 C10orf71Q711Q0 1435 aa13.49□□□□□ -0.25
VWA3A-201ENST00000299840 POLRMTO00411 1230 aaKnown RBP13.48□□□□□ -0.25
VWA3A-201ENST00000299840 DDR1Q08345 913 aa13.48□□□□□ -0.25
VWA3A-201ENST00000299840 NFIXQ14938 502 aa13.48□□□□□ -0.25
VWA3A-201ENST00000299840 L1TD1Q5T7N2 865 aaKnown RBP13.48□□□□□ -0.25
VWA3A-201ENST00000299840 HDGFL1Q5TGJ6 251 aa13.48□□□□□ -0.25
VWA3A-201ENST00000299840 TAF3Q5VWG9 929 aa13.48□□□□□ -0.25
VWA3A-201ENST00000299840 ZNF330Q9Y3S2 320 aaPredicted RBP13.48□□□□□ -0.25
VWA3A-201ENST00000299840 TSR2Q969E8 191 aaKnown RBP13.48□□□□□ -0.25
VWA3A-201ENST00000299840 MYH16Q9H6N6 1097 aa13.48□□□□□ -0.25
VWA3A-201ENST00000299840 DBF4Q9UBU7 674 aaPredicted RBP13.48□□□□□ -0.25
VWA3A-201ENST00000299840 MAP3K15Q6ZN16 1313 aa13.47□□□□□ -0.25
VWA3A-201ENST00000299840 ZNF652Q9Y2D9 606 aa13.47□□□□□ -0.25
VWA3A-201ENST00000299840 BRCA1P38398 1863 aaKnown RBP13.47□□□□□ -0.25
VWA3A-201ENST00000299840 MYL6BP14649 208 aa13.47□□□□□ -0.25
VWA3A-201ENST00000299840 GOLGA2Q08379 1002 aa13.47□□□□□ -0.25
VWA3A-201ENST00000299840 SPINK5Q9NQ38 1064 aaPredicted RBP13.47□□□□□ -0.25
VWA3A-201ENST00000299840 PROSER3Q2NL68 480 aa13.46□□□□□ -0.25
VWA3A-201ENST00000299840 TBC1D9BQ66K14 1250 aa13.46□□□□□ -0.25
VWA3A-201ENST00000299840 HYPKQ9NX55 129 aa13.46□□□□□ -0.25
VWA3A-201ENST00000299840 ANKRD31Q8N7Z5 1873 aa13.46□□□□□ -0.25
VWA3A-201ENST00000299840 KIF6Q6ZMV9 814 aa13.46□□□□□ -0.26
VWA3A-201ENST00000299840 TTLL7Q6ZT98 887 aa13.46□□□□□ -0.26
VWA3A-201ENST00000299840 TSPYL6Q8N831 410 aa13.46□□□□□ -0.26
VWA3A-201ENST00000299840 CHPF2Q9P2E5 772 aa13.46□□□□□ -0.26
VWA3A-201ENST00000299840 DLEC1Q9Y238 1755 aa13.46□□□□□ -0.26
VWA3A-201ENST00000299840 ATP10DQ9P241 1426 aa13.45□□□□□ -0.26
VWA3A-201ENST00000299840 N4BP2Q86UW6 1770 aaPredicted RBP13.45□□□□□ -0.26
VWA3A-201ENST00000299840 CARMIL3Q8ND23 1372 aa13.45□□□□□ -0.26
VWA3A-201ENST00000299840 ARFGEF2Q9Y6D5 1785 aa13.45□□□□□ -0.26
VWA3A-201ENST00000299840 SERPINB2P05120 415 aa13.45□□□□□ -0.26
VWA3A-201ENST00000299840 TWISTNBQ3B726 338 aaPredicted RBP13.45□□□□□ -0.26
VWA3A-201ENST00000299840 CCDC30Q5VVM6 783 aa13.45□□□□□ -0.26
VWA3A-201ENST00000299840 ARID3AQ99856 593 aa13.45□□□□□ -0.26
VWA3A-201ENST00000299840 NECTIN2Q92692 538 aa13.44□□□□□ -0.26
VWA3A-201ENST00000299840 ELL2O00472 640 aaPredicted RBP13.44□□□□□ -0.26
VWA3A-201ENST00000299840 ANXA1P04083 346 aa13.44□□□□□ -0.26
VWA3A-201ENST00000299840 TGFB2P61812 414 aa13.44□□□□□ -0.26
VWA3A-201ENST00000299840 SLFN5Q08AF3 891 aa13.44□□□□□ -0.26
VWA3A-201ENST00000299840 HLFQ16534 295 aa13.44□□□□□ -0.26
VWA3A-201ENST00000299840 GIGYF2Q6Y7W6 1299 aaKnown RBP13.44□□□□□ -0.26
VWA3A-201ENST00000299840 TRMT2AQ8IZ69 625 aaKnown RBP13.44□□□□□ -0.26
VWA3A-201ENST00000299840 SETDB2Q96T68 719 aa13.44□□□□□ -0.26
VWA3A-201ENST00000299840 VAMP4O75379 141 aa13.43□□□□□ -0.26
VWA3A-201ENST00000299840 EXOSC9Q06265 439 aaKnown RBP13.43□□□□□ -0.26
VWA3A-201ENST00000299840 COPS6Q7L5N1 327 aa13.43□□□□□ -0.26
VWA3A-201ENST00000299840 XAGE3Q8WTP9 111 aa13.43□□□□□ -0.26
VWA3A-201ENST00000299840 IBTKQ9P2D0 1353 aaPredicted RBP13.43□□□□□ -0.26
VWA3A-201ENST00000299840 NLGN2Q8NFZ4 835 aa13.43□□□□□ -0.26
VWA3A-201ENST00000299840 PXDNLA1KZ92 1463 aa13.42□□□□□ -0.26
VWA3A-201ENST00000299840 LETM1O95202 739 aaPredicted RBP13.42□□□□□ -0.26
VWA3A-201ENST00000299840 ZNF34Q8IZ26 560 aa13.42□□□□□ -0.26
VWA3A-201ENST00000299840 ARFGEF1Q9Y6D6 1849 aa13.42□□□□□ -0.26
VWA3A-201ENST00000299840 PLBD2Q8NHP8 589 aa13.42□□□□□ -0.26
VWA3A-201ENST00000299840 ZSCAN20P17040 1043 aaPredicted RBP13.41□□□□□ -0.26
VWA3A-201ENST00000299840 HSP90AB3PQ58FF7 597 aa13.41□□□□□ -0.26
VWA3A-201ENST00000299840 BICDL1Q6ZP65 573 aa13.41□□□□□ -0.26
VWA3A-201ENST00000299840 GTPBP4Q9BZE4 634 aaKnown RBP13.41□□□□□ -0.26
VWA3A-201ENST00000299840 MTERF4Q7Z6M4 381 aaKnown RBP13.41□□□□□ -0.26
VWA3A-201ENST00000299840 ZBTB3Q9H5J0 574 aa13.41□□□□□ -0.26
VWA3A-201ENST00000299840 PDZRN3Q9UPQ7 1066 aa13.41□□□□□ -0.26
VWA3A-201ENST00000299840 NIP7Q9Y221 180 aaKnown RBP eCLIP13.41□□□□□ -0.26
VWA3A-201ENST00000299840 PRR5LQ6MZQ0 368 aa13.4□□□□□ -0.26
VWA3A-201ENST00000299840 CHD4Q14839 1912 aa13.4□□□□□ -0.26
VWA3A-201ENST00000299840 ANKRD13DQ6ZTN6 518 aa13.4□□□□□ -0.26
VWA3A-201ENST00000299840 CERS3Q8IU89 383 aa13.4□□□□□ -0.26
VWA3A-201ENST00000299840 STK31Q9BXU1 1019 aa13.4□□□□□ -0.26
VWA3A-201ENST00000299840 SRCAPQ6ZRS2 3230 aa13.4□□□□□ -0.27
VWA3A-201ENST00000299840 AIMP1Q12904 312 aaKnown RBP13.39□□□□□ -0.27
VWA3A-201ENST00000299840 TCIRG1Q13488 830 aa13.39□□□□□ -0.27
VWA3A-201ENST00000299840 RIC1Q4ADV7 1423 aa13.39□□□□□ -0.27
VWA3A-201ENST00000299840 PARP10Q53GL7 1025 aa13.39□□□□□ -0.27
VWA3A-201ENST00000299840 TPTE2Q6XPS3 522 aa13.39□□□□□ -0.27
VWA3A-201ENST00000299840 BRIP1Q9BX63 1249 aa13.39□□□□□ -0.27
VWA3A-201ENST00000299840 NYXQ9GZU5 481 aa13.39□□□□□ -0.27
VWA3A-201ENST00000299840 PHAXQ9H814 394 aaKnown RBP13.39□□□□□ -0.27
VWA3A-201ENST00000299840 COL11A2P13942 1736 aaPredicted RBP13.38□□□□□ -0.27
VWA3A-201ENST00000299840 DCAF8L1A6NGE4 600 aa13.38□□□□□ -0.27
VWA3A-201ENST00000299840 CNBD1Q8NA66 436 aa13.38□□□□□ -0.27
VWA3A-201ENST00000299840 RNF123Q5XPI4 1314 aa13.38□□□□□ -0.27
VWA3A-201ENST00000299840 UBN2Q6ZU65 1347 aa13.38□□□□□ -0.27
VWA3A-201ENST00000299840 KCNA3P22001 575 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms