RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 Q9H521 79 aa8.54□□□□□ -1.04
TSC1-201ENST00000298552 SPECC1L-ADORA2AF8WAN1 911 aa8.54□□□□□ -1.04
TSC1-201ENST00000298552 PALM2Q8IXS6 379 aa8.54□□□□□ -1.04
TSC1-201ENST00000298552 LMBR1Q8WVP7 490 aa8.54□□□□□ -1.04
TSC1-201ENST00000298552 KRT3P12035 628 aa8.54□□□□□ -1.04
TSC1-201ENST00000298552 UBAC1Q9BSL1 405 aa8.54□□□□□ -1.04
TSC1-201ENST00000298552 TEKT2Q9UIF3 430 aa8.54□□□□□ -1.04
TSC1-201ENST00000298552 WDR33Q9C0J8 1336 aaKnown RBP8.54□□□□□ -1.04
TSC1-201ENST00000298552 SFPQP23246 707 aaKnown RBP eCLIP8.54□□□□□ -1.04
TSC1-201ENST00000298552 UTP14CQ5TAP6 766 aaKnown RBP8.54□□□□□ -1.04
TSC1-201ENST00000298552 DRC3Q9H069 523 aa8.54□□□□□ -1.04
TSC1-201ENST00000298552 ATAD2Q6PL18 1390 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 PRPF38AQ8NAV1 312 aaKnown RBP8.53□□□□□ -1.04
TSC1-201ENST00000298552 TUBB4AP04350 444 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 BLVRAP53004 296 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 ERMNQ8TAM6 284 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 MMRN2Q9H8L6 949 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 RBM27Q9P2N5 1060 aaKnown RBP8.53□□□□□ -1.04
TSC1-201ENST00000298552 FAN1Q9Y2M0 1017 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 CTAGE8P0CG41 777 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 CTAGE4Q8IX94 777 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 ME1P48163 572 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 NEK11Q8NG66 645 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 SDCCAG3Q96C92 435 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 DTNBO60941 627 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 GSDMDP57764 484 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 ZNF365Q70YC5 407 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 SYTL4Q96C24 671 aaPredicted RBP8.53□□□□□ -1.04
TSC1-201ENST00000298552 LMNAP02545 664 aaKnown RBP8.53□□□□□ -1.04
TSC1-201ENST00000298552 XRCC6P12956 609 aaKnown RBP eCLIP8.53□□□□□ -1.04
TSC1-201ENST00000298552 ZNF131P52739 623 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 F8W8V4 182 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 PPP1R9AQ9ULJ8 1098 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 FAM169AQ9Y6X4 670 aa8.53□□□□□ -1.04
TSC1-201ENST00000298552 GFAPP14136 432 aa8.52□□□□□ -1.04
TSC1-201ENST00000298552 GEN1Q17RS7 908 aa8.52□□□□□ -1.04
TSC1-201ENST00000298552 NLRP13Q86W25 1043 aa8.52□□□□□ -1.04
TSC1-201ENST00000298552 TMCO5AQ8N6Q1 288 aa8.52□□□□□ -1.04
TSC1-201ENST00000298552 GPR161Q8N6U8 529 aaKnown RBP8.52□□□□□ -1.04
TSC1-201ENST00000298552 CCDC63Q8NA47 563 aa8.52□□□□□ -1.04
TSC1-201ENST00000298552 PPFIA1Q13136 1202 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 MCM10Q7L590 875 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 ARFGAP2Q8N6H7 521 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 RAPGEF4Q8WZA2 1011 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 SCN8AQ9UQD0 1980 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.52□□□□□ -1.05
TSC1-201ENST00000298552 IRX3P78415 501 aaPredicted RBP8.52□□□□□ -1.05
TSC1-201ENST00000298552 PDCLQ13371 301 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 KANK3Q6NY19 840 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 HELBQ8NG08 1087 aaPredicted RBP8.52□□□□□ -1.05
TSC1-201ENST00000298552 ZCRB1Q8TBF4 217 aaKnown RBP8.52□□□□□ -1.05
TSC1-201ENST00000298552 HSP90AA5PQ58FG0 334 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 CFAP70Q5T0N1 1121 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 FYB2Q5VWT5 728 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 POTEDQ86YR6 584 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 UPF3BQ9BZI7 483 aaKnown RBP8.52□□□□□ -1.05
TSC1-201ENST00000298552 TTC16Q8NEE8 873 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 FOXD4L1Q9NU39 408 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 BAG5Q9UL15 447 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 GNAI3P08754 354 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 PSMA3P25788 255 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 RBM5P52756 815 aaKnown RBP eCLIP8.52□□□□□ -1.05
TSC1-201ENST00000298552 CUX2O14529 1486 aa8.52□□□□□ -1.05
TSC1-201ENST00000298552 LPXNO60711 386 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 CCT6AP40227 531 aaKnown RBP8.51□□□□□ -1.05
TSC1-201ENST00000298552 RIC3Q7Z5B4 369 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 PNMA2Q9UL42 364 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 CARMIL2Q6F5E8 1435 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 CCDC125Q86Z20 511 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 STAC3Q96MF2 364 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 KRT23Q9C075 422 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 CA8P35219 290 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 CEBPZQ03701 1054 aaKnown RBP8.51□□□□□ -1.05
TSC1-201ENST00000298552 MAD1L1Q9Y6D9 718 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 CARMIL1Q5VZK9 1371 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 SLC4A3P48751 1232 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 RASSF2P50749 326 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 CCDC122Q5T0U0 273 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 EVC2Q86UK5 1308 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 GTF2A1P52655 376 aaPredicted RBP8.51□□□□□ -1.05
TSC1-201ENST00000298552 CTAGE15A4D2H0 777 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 PPP2R5DQ14738 602 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 CCDC114Q96M63 670 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 JAKMIP1Q96N16 626 aaKnown RBP8.51□□□□□ -1.05
TSC1-201ENST00000298552 ESYT2A0FGR8 921 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 RAB11FIP3O75154 756 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 PDE6AP16499 860 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 GPATCH11Q8N954 259 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 ORC6Q9Y5N6 252 aa8.51□□□□□ -1.05
TSC1-201ENST00000298552 PODNQ7Z5L7 613 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 FNBP4Q8N3X1 1017 aaPredicted RBP8.5□□□□□ -1.05
TSC1-201ENST00000298552 HNRNPCL2B2RXH8 293 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 HNRNPCL1O60812 293 aaKnown RBP8.5□□□□□ -1.05
TSC1-201ENST00000298552 CDC45O75419 566 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 SERPINI2O75830 405 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 MTIF2P46199 727 aaKnown RBP8.5□□□□□ -1.05
TSC1-201ENST00000298552 RUFY3Q7L099 469 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 NEUROD6Q96NK8 337 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 TEX12Q9BXU0 123 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 BICDL1Q6ZP65 573 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms