RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 GLRX3O76003 335 aaKnown RBP11.23□□□□□ -0.61
PRDM9-201ENST00000296682 BAG4O95429 457 aaKnown RBP11.23□□□□□ -0.61
PRDM9-201ENST00000296682 TTLL7Q6ZT98 887 aa11.23□□□□□ -0.61
PRDM9-201ENST00000296682 ZNF594Q96JF6 807 aaPredicted RBP11.23□□□□□ -0.61
PRDM9-201ENST00000296682 FAM227BQ96M60 508 aa11.23□□□□□ -0.61
PRDM9-201ENST00000296682 HSP90B1P14625 803 aaKnown RBP11.22□□□□□ -0.61
PRDM9-201ENST00000296682 NUCB2P80303 420 aa11.22□□□□□ -0.61
PRDM9-201ENST00000296682 DDX46Q7L014 1031 aaKnown RBP11.22□□□□□ -0.61
PRDM9-201ENST00000296682 DDX60Q8IY21 1712 aaKnown RBP11.22□□□□□ -0.61
PRDM9-201ENST00000296682 TIMM10P62072 90 aa11.22□□□□□ -0.61
PRDM9-201ENST00000296682 EPHA10Q5JZY3 1008 aa11.22□□□□□ -0.61
PRDM9-201ENST00000296682 RUFY2Q8WXA3 655 aa11.22□□□□□ -0.61
PRDM9-201ENST00000296682 EAF2Q96CJ1 260 aaPredicted RBP11.22□□□□□ -0.61
PRDM9-201ENST00000296682 USP42Q9H9J4 1324 aaKnown RBP11.22□□□□□ -0.61
PRDM9-201ENST00000296682 ZKSCAN1P17029 563 aaPredicted RBP11.22□□□□□ -0.61
PRDM9-201ENST00000296682 FKBP4Q02790 459 aaKnown RBP eCLIP11.22□□□□□ -0.61
PRDM9-201ENST00000296682 NECAB1Q8N987 351 aa11.22□□□□□ -0.61
PRDM9-201ENST00000296682 CHGBP05060 677 aa11.21□□□□□ -0.61
PRDM9-201ENST00000296682 FERMT3Q86UX7 667 aa11.21□□□□□ -0.61
PRDM9-201ENST00000296682 CCDC83Q8IWF9 413 aa11.21□□□□□ -0.61
PRDM9-201ENST00000296682 STAP2Q9UGK3 403 aa11.21□□□□□ -0.61
PRDM9-201ENST00000296682 CIZ1Q9ULV3 898 aaPredicted RBP11.21□□□□□ -0.61
PRDM9-201ENST00000296682 XRCC6P12956 609 aaKnown RBP eCLIP11.21□□□□□ -0.62
PRDM9-201ENST00000296682 TFCP2Q12800 502 aa11.21□□□□□ -0.62
PRDM9-201ENST00000296682 DCAF5Q96JK2 942 aa11.21□□□□□ -0.62
PRDM9-201ENST00000296682 LRRC2Q9BYS8 371 aa11.21□□□□□ -0.62
PRDM9-201ENST00000296682 BTG4Q9NY30 223 aa11.21□□□□□ -0.62
PRDM9-201ENST00000296682 IGKV5-2P06315 115 aa11.2□□□□□ -0.62
PRDM9-201ENST00000296682 SLFNL1Q499Z3 407 aa11.2□□□□□ -0.62
PRDM9-201ENST00000296682 ACSBG1Q96GR2 724 aa11.2□□□□□ -0.62
PRDM9-201ENST00000296682 SMC3Q9UQE7 1217 aa11.2□□□□□ -0.62
PRDM9-201ENST00000296682 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.2□□□□□ -0.62
PRDM9-201ENST00000296682 UTYO14607 1347 aa11.2□□□□□ -0.62
PRDM9-201ENST00000296682 FIBPO43427 364 aa11.2□□□□□ -0.62
PRDM9-201ENST00000296682 RAB3GAP1Q15042 981 aa11.2□□□□□ -0.62
PRDM9-201ENST00000296682 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
PRDM9-201ENST00000296682 STK11IPQ8N1F8 1099 aa11.2□□□□□ -0.62
PRDM9-201ENST00000296682 TMOD3Q9NYL9 352 aa11.2□□□□□ -0.62
PRDM9-201ENST00000296682 GCKRQ14397 625 aa11.2□□□□□ -0.62
PRDM9-201ENST00000296682 BRINP3Q76B58 766 aa11.2□□□□□ -0.62
PRDM9-201ENST00000296682 PTH1RQ03431 593 aa11.19□□□□□ -0.62
PRDM9-201ENST00000296682 POLA2Q14181 598 aa11.19□□□□□ -0.62
PRDM9-201ENST00000296682 HSP90AB3PQ58FF7 597 aa11.19□□□□□ -0.62
PRDM9-201ENST00000296682 CCDC129Q6ZRS4 1044 aa11.19□□□□□ -0.62
PRDM9-201ENST00000296682 AFDNP55196 1824 aaKnown RBP11.19□□□□□ -0.62
PRDM9-201ENST00000296682 ADCY9O60503 1353 aa11.19□□□□□ -0.62
PRDM9-201ENST00000296682 CPDO75976 1380 aa11.19□□□□□ -0.62
PRDM9-201ENST00000296682 NEURL1BA8MQ27 555 aa11.19□□□□□ -0.62
PRDM9-201ENST00000296682 ALDH1L1O75891 902 aa11.19□□□□□ -0.62
PRDM9-201ENST00000296682 WASHC4Q2M389 1173 aa11.19□□□□□ -0.62
PRDM9-201ENST00000296682 ERC1Q8IUD2 1116 aa11.19□□□□□ -0.62
PRDM9-201ENST00000296682 FAM89AQ96GI7 184 aa11.19□□□□□ -0.62
PRDM9-201ENST00000296682 COL22A1Q8NFW1 1626 aaPredicted RBP11.19□□□□□ -0.62
PRDM9-201ENST00000296682 NMIQ13287 307 aaPredicted RBP11.19□□□□□ -0.62
PRDM9-201ENST00000296682 MTX1Q13505 466 aa11.18□□□□□ -0.62
PRDM9-201ENST00000296682 DBNDD2Q9BQY9 259 aa11.18□□□□□ -0.62
PRDM9-201ENST00000296682 GRPEL1Q9HAV7 217 aa11.18□□□□□ -0.62
PRDM9-201ENST00000296682 TBC1D2BQ9UPU7 963 aa11.18□□□□□ -0.62
PRDM9-201ENST00000296682 GOLIM4O00461 696 aa11.18□□□□□ -0.62
PRDM9-201ENST00000296682 SEC62Q99442 399 aaKnown RBP11.18□□□□□ -0.62
PRDM9-201ENST00000296682 RREB1Q92766 1687 aa11.18□□□□□ -0.62
PRDM9-201ENST00000296682 TOGARAM1Q9Y4F4 1720 aa11.18□□□□□ -0.62
PRDM9-201ENST00000296682 FSD2A1L4K1 749 aa11.17□□□□□ -0.62
PRDM9-201ENST00000296682 SASH1O94885 1247 aa11.17□□□□□ -0.62
PRDM9-201ENST00000296682 IL2RBP14784 551 aa11.17□□□□□ -0.62
PRDM9-201ENST00000296682 PDRG1Q9NUG6 133 aa11.17□□□□□ -0.62
PRDM9-201ENST00000296682 ASAP1Q9ULH1 1129 aa11.17□□□□□ -0.62
PRDM9-201ENST00000296682 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.17□□□□□ -0.62
PRDM9-201ENST00000296682 LRP6O75581 1613 aa11.17□□□□□ -0.62
PRDM9-201ENST00000296682 METTL22Q9BUU2 404 aaPredicted RBP11.17□□□□□ -0.62
PRDM9-201ENST00000296682 CYP2E1P05181 493 aaPredicted RBP11.17□□□□□ -0.62
PRDM9-201ENST00000296682 AK2P54819 239 aa11.17□□□□□ -0.62
PRDM9-201ENST00000296682 CEBPZQ03701 1054 aaKnown RBP11.17□□□□□ -0.62
PRDM9-201ENST00000296682 DNAJC10Q8IXB1 793 aa11.17□□□□□ -0.62
PRDM9-201ENST00000296682 DDX11Q96FC9 970 aa11.17□□□□□ -0.62
PRDM9-201ENST00000296682 SYCE3A1L190 88 aa11.16□□□□□ -0.62
PRDM9-201ENST00000296682 NPHP1O15259 732 aa11.16□□□□□ -0.62
PRDM9-201ENST00000296682 ADCK5Q3MIX3 580 aa11.16□□□□□ -0.62
PRDM9-201ENST00000296682 SYNE4Q8N205 404 aa11.16□□□□□ -0.62
PRDM9-201ENST00000296682 PI4K2BQ8TCG2 481 aa11.16□□□□□ -0.62
PRDM9-201ENST00000296682 CYP46A1Q9Y6A2 500 aa11.16□□□□□ -0.62
PRDM9-201ENST00000296682 APPP05067 770 aa11.16□□□□□ -0.62
PRDM9-201ENST00000296682 PTMAP06454 111 aaKnown RBP11.16□□□□□ -0.62
PRDM9-201ENST00000296682 CCDC57Q2TAC2 916 aa11.16□□□□□ -0.62
PRDM9-201ENST00000296682 GAS2L3Q86XJ1 694 aa11.16□□□□□ -0.62
PRDM9-201ENST00000296682 RBM8AQ9Y5S9 174 aaKnown RBP11.16□□□□□ -0.62
PRDM9-201ENST00000296682 SPEF2Q9C093 1822 aa11.16□□□□□ -0.62
PRDM9-201ENST00000296682 SGSM2O43147 1006 aa11.16□□□□□ -0.62
PRDM9-201ENST00000296682 SKOR2Q2VWA4 1001 aaPredicted RBP11.16□□□□□ -0.62
PRDM9-201ENST00000296682 CHST3Q7LGC8 479 aa11.16□□□□□ -0.62
PRDM9-201ENST00000296682 RAB11FIP4Q86YS3 637 aa11.16□□□□□ -0.62
PRDM9-201ENST00000296682 SNX14Q9Y5W7 946 aa11.16□□□□□ -0.62
PRDM9-201ENST00000296682 HELBQ8NG08 1087 aaPredicted RBP11.15□□□□□ -0.62
PRDM9-201ENST00000296682 NAP1L5Q96NT1 182 aaPredicted RBP11.15□□□□□ -0.62
PRDM9-201ENST00000296682 GOLGA6L4A6NEF3 574 aa11.15□□□□□ -0.62
PRDM9-201ENST00000296682 FAM173BQ6P4H8 233 aa11.15□□□□□ -0.62
PRDM9-201ENST00000296682 EVI5LQ96CN4 794 aa11.15□□□□□ -0.62
PRDM9-201ENST00000296682 KCNQ4P56696 695 aa11.15□□□□□ -0.62
PRDM9-201ENST00000296682 PDIA6Q15084 440 aa11.15□□□□□ -0.62
PRDM9-201ENST00000296682 ZNF831Q5JPB2 1677 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms