RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 POTEB2H3BUK9 544 aa18.51■□□□□ 0.55
SSRP1-202ENST00000293880 FGFR1OPO95684 399 aaKnown RBP18.51■□□□□ 0.55
SSRP1-202ENST00000293880 PHAXQ9H814 394 aaKnown RBP18.5■□□□□ 0.55
SSRP1-202ENST00000293880 DDX19AQ9NUU7 478 aaKnown RBP18.5■□□□□ 0.55
SSRP1-202ENST00000293880 MXRA7P84157 204 aa18.5■□□□□ 0.55
SSRP1-202ENST00000293880 DDX23Q9BUQ8 820 aaKnown RBP18.5■□□□□ 0.55
SSRP1-202ENST00000293880 NAA15Q9BXJ9 866 aaKnown RBP18.5■□□□□ 0.55
SSRP1-202ENST00000293880 RRAGBQ5VZM2 374 aa18.5■□□□□ 0.55
SSRP1-202ENST00000293880 C10orf67Q8IYJ2 551 aa18.5■□□□□ 0.55
SSRP1-202ENST00000293880 CALML4Q96GE6 196 aa18.5■□□□□ 0.55
SSRP1-202ENST00000293880 HYPKQ9NX55 129 aa18.5■□□□□ 0.55
SSRP1-202ENST00000293880 SLC5A1P13866 664 aa18.49■□□□□ 0.55
SSRP1-202ENST00000293880 MCM6Q14566 821 aa18.49■□□□□ 0.55
SSRP1-202ENST00000293880 DAAM2Q86T65 1068 aa18.49■□□□□ 0.55
SSRP1-202ENST00000293880 PPM1EQ8WY54 764 aa18.49■□□□□ 0.55
SSRP1-202ENST00000293880 ZNF165P49910 485 aa18.49■□□□□ 0.55
SSRP1-202ENST00000293880 MAP3K12Q12852 859 aa18.49■□□□□ 0.55
SSRP1-202ENST00000293880 NME9Q86XW9 330 aa18.49■□□□□ 0.55
SSRP1-202ENST00000293880 SELENOSQ9BQE4 189 aa18.49■□□□□ 0.55
SSRP1-202ENST00000293880 TMOD3Q9NYL9 352 aa18.49■□□□□ 0.55
SSRP1-202ENST00000293880 STARD3NLO95772 234 aa18.49■□□□□ 0.55
SSRP1-202ENST00000293880 METAP2P50579 478 aaKnown RBP eCLIP18.49■□□□□ 0.552e-6■■□□□ 12.3
SSRP1-202ENST00000293880 BMS1Q14692 1282 aaKnown RBP18.49■□□□□ 0.55
SSRP1-202ENST00000293880 FBF1Q8TES7 1133 aa18.49■□□□□ 0.55
SSRP1-202ENST00000293880 TCEANC2Q96MN5 208 aa18.49■□□□□ 0.55
SSRP1-202ENST00000293880 SAMM50Q9Y512 469 aa18.49■□□□□ 0.55
SSRP1-202ENST00000293880 TRIM27P14373 513 aa18.49■□□□□ 0.55
SSRP1-202ENST00000293880 PPP1R14CQ8TAE6 165 aa18.49■□□□□ 0.55
SSRP1-202ENST00000293880 TAOK3Q9H2K8 898 aa18.49■□□□□ 0.55
SSRP1-202ENST00000293880 DNAJC21Q5F1R6 531 aaKnown RBP18.49■□□□□ 0.55
SSRP1-202ENST00000293880 IFIT5Q13325 482 aaKnown RBP18.48■□□□□ 0.55
SSRP1-202ENST00000293880 USP48Q86UV5 1035 aa18.48■□□□□ 0.55
SSRP1-202ENST00000293880 TRIM47Q96LD4 638 aa18.48■□□□□ 0.55
SSRP1-202ENST00000293880 ATP5J2-PTCD1G3V325 749 aa18.48■□□□□ 0.55
SSRP1-202ENST00000293880 UBASH3AP57075 661 aa18.48■□□□□ 0.55
SSRP1-202ENST00000293880 STAC3Q96MF2 364 aa18.48■□□□□ 0.55
SSRP1-202ENST00000293880 TMOD2Q9NZR1 351 aa18.48■□□□□ 0.55
SSRP1-202ENST00000293880 TRMT112Q9UI30 125 aaKnown RBP18.48■□□□□ 0.55
SSRP1-202ENST00000293880 DNAI1Q9UI46 699 aa18.48■□□□□ 0.55
SSRP1-202ENST00000293880 A0A087WZG4 1122 aa18.48■□□□□ 0.55
SSRP1-202ENST00000293880 CCDC6Q16204 474 aa18.48■□□□□ 0.55
SSRP1-202ENST00000293880 EMILIN1Q9Y6C2 1016 aa18.48■□□□□ 0.55
SSRP1-202ENST00000293880 ZBTB3Q9H5J0 574 aa18.48■□□□□ 0.55
SSRP1-202ENST00000293880 FSD2A1L4K1 749 aa18.48■□□□□ 0.55
SSRP1-202ENST00000293880 HMGB1P09429 215 aaKnown RBP18.48■□□□□ 0.55
SSRP1-202ENST00000293880 IQCA1Q86XH1 822 aa18.48■□□□□ 0.55
SSRP1-202ENST00000293880 AOPEPQ8N6M6 819 aa18.48■□□□□ 0.55
SSRP1-202ENST00000293880 NUDT16Q96DE0 195 aaKnown RBP18.48■□□□□ 0.55
SSRP1-202ENST00000293880 PPARDQ03181 441 aa18.47■□□□□ 0.55
SSRP1-202ENST00000293880 FAM83GA6ND36 823 aa18.47■□□□□ 0.55
SSRP1-202ENST00000293880 ARID5AQ03989 594 aa18.47■□□□□ 0.55
SSRP1-202ENST00000293880 SPECC1LQ69YQ0 1117 aa18.47■□□□□ 0.55
SSRP1-202ENST00000293880 LRSAM1Q6UWE0 723 aa18.47■□□□□ 0.55
SSRP1-202ENST00000293880 BICD1Q96G01 975 aa18.47■□□□□ 0.55
SSRP1-202ENST00000293880 ARAP1Q96P48 1450 aa18.47■□□□□ 0.55
SSRP1-202ENST00000293880 ZPR1O75312 459 aa18.47■□□□□ 0.55
SSRP1-202ENST00000293880 ADAMTS2O95450 1211 aa18.47■□□□□ 0.55
SSRP1-202ENST00000293880 MSL1Q68DK7 614 aa18.47■□□□□ 0.55
SSRP1-202ENST00000293880 EXOC1Q9NV70 894 aa18.47■□□□□ 0.55
SSRP1-202ENST00000293880 CCDC196A0A1B0GTZ2 297 aa18.47■□□□□ 0.55
SSRP1-202ENST00000293880 SLC52A1Q9NWF4 448 aa18.47■□□□□ 0.55
SSRP1-202ENST00000293880 CD109Q6YHK3 1445 aa18.46■□□□□ 0.55
SSRP1-202ENST00000293880 DYNC1I1O14576 645 aa18.46■□□□□ 0.55
SSRP1-202ENST00000293880 MARCKSP29966 332 aaPredicted RBP18.46■□□□□ 0.55
SSRP1-202ENST00000293880 TTLL12Q14166 644 aaPredicted RBP18.46■□□□□ 0.55
SSRP1-202ENST00000293880 KRT13P13646 458 aa18.46■□□□□ 0.55
SSRP1-202ENST00000293880 EVI5LQ96CN4 794 aa18.46■□□□□ 0.55
SSRP1-202ENST00000293880 KARSQ15046 597 aaKnown RBP18.46■□□□□ 0.54
SSRP1-202ENST00000293880 DNAJC25Q9H1X3 360 aa18.46■□□□□ 0.54
SSRP1-202ENST00000293880 ZNF287Q9HBT7 754 aa18.46■□□□□ 0.54
SSRP1-202ENST00000293880 ORC3Q9UBD5 711 aaPredicted RBP18.46■□□□□ 0.54
SSRP1-202ENST00000293880 UBE2HP62256 183 aa18.45■□□□□ 0.54
SSRP1-202ENST00000293880 N4BP3O15049 544 aa18.45■□□□□ 0.54
SSRP1-202ENST00000293880 HSPA4P34932 840 aa18.45■□□□□ 0.54
SSRP1-202ENST00000293880 IARSP41252 1262 aaKnown RBP18.45■□□□□ 0.54
SSRP1-202ENST00000293880 VPS18Q9P253 973 aa18.45■□□□□ 0.54
SSRP1-202ENST00000293880 NEMFO60524 1076 aa18.45■□□□□ 0.54
SSRP1-202ENST00000293880 TTC31Q49AM3 519 aaPredicted RBP18.45■□□□□ 0.54
SSRP1-202ENST00000293880 TTC22Q5TAA0 569 aa18.45■□□□□ 0.54
SSRP1-202ENST00000293880 NEK1Q96PY6 1258 aa18.45■□□□□ 0.54
SSRP1-202ENST00000293880 NOLC1Q14978 699 aaKnown RBP eCLIP18.45■□□□□ 0.54
SSRP1-202ENST00000293880 RAB34Q9BZG1 259 aa18.45■□□□□ 0.54
SSRP1-202ENST00000293880 PAXBP1Q9Y5B6 917 aa18.45■□□□□ 0.54
SSRP1-202ENST00000293880 ZNF354CQ86Y25 554 aa18.45■□□□□ 0.54
SSRP1-202ENST00000293880 KAT14Q9H8E8 782 aa18.45■□□□□ 0.54
SSRP1-202ENST00000293880 EHBP1L1Q8N3D4 1523 aa18.44■□□□□ 0.54
SSRP1-202ENST00000293880 FAM160A1Q05DH4 1040 aa18.44■□□□□ 0.54
SSRP1-202ENST00000293880 CCDC186Q7Z3E2 898 aa18.44■□□□□ 0.54
SSRP1-202ENST00000293880 KRT222Q8N1A0 295 aa18.44■□□□□ 0.54
SSRP1-202ENST00000293880 NAP1L3Q99457 506 aaPredicted RBP18.44■□□□□ 0.54
SSRP1-202ENST00000293880 SKILP12757 684 aa18.44■□□□□ 0.54
SSRP1-202ENST00000293880 ARL1P40616 181 aaPredicted RBP18.44■□□□□ 0.54
SSRP1-202ENST00000293880 ALDH1L2Q3SY69 923 aa18.44■□□□□ 0.54
SSRP1-202ENST00000293880 TMX3Q96JJ7 454 aa18.44■□□□□ 0.54
SSRP1-202ENST00000293880 HMGXB3Q12766 1538 aa18.44■□□□□ 0.54
SSRP1-202ENST00000293880 ANKRD18BA2A2Z9 1011 aa18.44■□□□□ 0.54
SSRP1-202ENST00000293880 NAA25Q14CX7 972 aa18.44■□□□□ 0.54
SSRP1-202ENST00000293880 ZSCAN22P10073 491 aaPredicted RBP18.43■□□□□ 0.54
SSRP1-202ENST00000293880 DPH6Q7L8W6 267 aa18.43■□□□□ 0.54
SSRP1-202ENST00000293880 TROQ12816 1431 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms