RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 LAS1LQ9Y4W2 734 aaKnown RBP33.01■■■□□ 2.87
U2AF1-201ENST00000291552 DDNO94850 711 aaPredicted RBP33■■■□□ 2.87
U2AF1-201ENST00000291552 HOXA10P31260 410 aaPredicted RBP33■■■□□ 2.87
U2AF1-201ENST00000291552 XAGE3Q8WTP9 111 aa33■■■□□ 2.87
U2AF1-201ENST00000291552 SCN4AP35499 1836 aa33■■■□□ 2.87
U2AF1-201ENST00000291552 PARP10Q53GL7 1025 aa32.99■■■□□ 2.87
U2AF1-201ENST00000291552 COPS6Q7L5N1 327 aa32.99■■■□□ 2.87
U2AF1-201ENST00000291552 COL4A5P29400 1685 aa32.98■■■□□ 2.87
U2AF1-201ENST00000291552 RTKN2Q8IZC4 609 aa32.98■■■□□ 2.87
U2AF1-201ENST00000291552 DDX21Q9NR30 783 aaKnown RBP eCLIP32.98■■■□□ 2.87
U2AF1-201ENST00000291552 ZNF541Q9H0D2 1346 aa32.97■■■□□ 2.87
U2AF1-201ENST00000291552 AIMP1Q12904 312 aaKnown RBP32.96■■■□□ 2.87
U2AF1-201ENST00000291552 PPP1R42Q7Z4L9 355 aa32.96■■■□□ 2.87
U2AF1-201ENST00000291552 RPGRQ92834 1020 aaKnown RBP32.96■■■□□ 2.87
U2AF1-201ENST00000291552 CHPF2Q9P2E5 772 aa32.96■■■□□ 2.87
U2AF1-201ENST00000291552 SYNE4Q8N205 404 aa32.94■■■□□ 2.86
U2AF1-201ENST00000291552 UTP14AQ9BVJ6 771 aaKnown RBP32.94■■■□□ 2.86
U2AF1-201ENST00000291552 POTEIP0CG38 1075 aa32.93■■■□□ 2.86
U2AF1-201ENST00000291552 POTEJP0CG39 1038 aa32.93■■■□□ 2.86
U2AF1-201ENST00000291552 CFAP44Q96MT7 982 aa32.93■■■□□ 2.86
U2AF1-201ENST00000291552 CRAMP1Q96RY5 1269 aa32.93■■■□□ 2.86
U2AF1-201ENST00000291552 PSMD1Q99460 953 aa32.93■■■□□ 2.86
U2AF1-201ENST00000291552 DDX60Q8IY21 1712 aaKnown RBP32.93■■■□□ 2.86
U2AF1-201ENST00000291552 TAF1P21675 1872 aa32.93■■■□□ 2.86
U2AF1-201ENST00000291552 HOXB7P09629 217 aa32.92■■■□□ 2.86
U2AF1-201ENST00000291552 IARSP41252 1262 aaKnown RBP32.92■■■□□ 2.86
U2AF1-201ENST00000291552 SLC10A5Q5PT55 438 aa32.92■■■□□ 2.86
U2AF1-201ENST00000291552 HDGFL1Q5TGJ6 251 aa32.92■■■□□ 2.86
U2AF1-201ENST00000291552 NLRP10Q86W26 655 aa32.92■■■□□ 2.86
U2AF1-201ENST00000291552 L3MBTL3Q96JM7 780 aaPredicted RBP32.92■■■□□ 2.86
U2AF1-201ENST00000291552 MBIPQ9NS73 344 aa32.92■■■□□ 2.86
U2AF1-201ENST00000291552 APAF1O14727 1248 aa32.91■■■□□ 2.86
U2AF1-201ENST00000291552 ZNF853P0CG23 659 aa32.91■■■□□ 2.86
U2AF1-201ENST00000291552 RBM17Q96I25 401 aaKnown RBP32.9■■■□□ 2.86
U2AF1-201ENST00000291552 RNF123Q5XPI4 1314 aa32.89■■■□□ 2.86
U2AF1-201ENST00000291552 TCIRG1Q13488 830 aa32.89■■■□□ 2.86
U2AF1-201ENST00000291552 HSP90AB3PQ58FF7 597 aa32.89■■■□□ 2.86
U2AF1-201ENST00000291552 KLRG1Q96E93 195 aa32.89■■■□□ 2.86
U2AF1-201ENST00000291552 ADAMTSL1Q8N6G6 1762 aa32.88■■■□□ 2.85
U2AF1-201ENST00000291552 PPEF1O14829 653 aaPredicted RBP32.88■■■□□ 2.85
U2AF1-201ENST00000291552 CC2D2BQ6DHV5 1058 aa32.88■■■□□ 2.85
U2AF1-201ENST00000291552 FZD9O00144 591 aa32.87■■■□□ 2.85
U2AF1-201ENST00000291552 CCDC184Q52MB2 194 aa32.87■■■□□ 2.85
U2AF1-201ENST00000291552 DUSP27Q5VZP5 1158 aa32.87■■■□□ 2.85
U2AF1-201ENST00000291552 NLRP3Q96P20 1036 aa32.87■■■□□ 2.85
U2AF1-201ENST00000291552 ABCC4O15439 1325 aa32.86■■■□□ 2.85
U2AF1-201ENST00000291552 TCERG1O14776 1098 aaKnown RBP32.85■■■□□ 2.85
U2AF1-201ENST00000291552 HCLS1P14317 486 aaPredicted RBP32.85■■■□□ 2.85
U2AF1-201ENST00000291552 PCNTO95613 3336 aa32.84■■■□□ 2.85
U2AF1-201ENST00000291552 CHADLQ6NUI6 762 aa32.84■■■□□ 2.85
U2AF1-201ENST00000291552 ZNF428Q96B54 188 aa32.84■■■□□ 2.85
U2AF1-201ENST00000291552 TAF1DQ9H5J8 278 aaPredicted RBP32.84■■■□□ 2.85
U2AF1-201ENST00000291552 LTBP1Q14766 1721 aa32.84■■■□□ 2.85
U2AF1-201ENST00000291552 JMYQ8N9B5 988 aa32.83■■■□□ 2.85
U2AF1-201ENST00000291552 PLBD2Q8NHP8 589 aa32.83■■■□□ 2.85
U2AF1-201ENST00000291552 IFT57Q9NWB7 429 aa32.83■■■□□ 2.85
U2AF1-201ENST00000291552 DBF4Q9UBU7 674 aaPredicted RBP32.83■■■□□ 2.85
U2AF1-201ENST00000291552 IQCA1LA6NCM1 817 aa32.82■■■□□ 2.84
U2AF1-201ENST00000291552 TRMT112Q9UI30 125 aaKnown RBP32.82■■■□□ 2.84
U2AF1-201ENST00000291552 LRRC37AA6NMS7 1700 aa32.81■■■□□ 2.84
U2AF1-201ENST00000291552 SH3TC1Q8TE82 1336 aa32.8■■■□□ 2.84
U2AF1-201ENST00000291552 ISCA1Q9BUE6 129 aa32.8■■■□□ 2.84
U2AF1-201ENST00000291552 ATP6V0A2Q9Y487 856 aa32.8■■■□□ 2.84
U2AF1-201ENST00000291552 COL4A1P02462 1669 aa32.8■■■□□ 2.84
U2AF1-201ENST00000291552 GNAI1P63096 354 aa32.79■■■□□ 2.84
U2AF1-201ENST00000291552 GRIPAP1Q4V328 841 aa32.79■■■□□ 2.84
U2AF1-201ENST00000291552 ANKRD13DQ6ZTN6 518 aa32.79■■■□□ 2.84
U2AF1-201ENST00000291552 HYPKQ9NX55 129 aa32.78■■■□□ 2.84
U2AF1-201ENST00000291552 GPC2Q8N158 579 aa32.77■■■□□ 2.84
U2AF1-201ENST00000291552 JDP2Q8WYK2 163 aa32.77■■■□□ 2.84
U2AF1-201ENST00000291552 HACL1Q9UJ83 578 aa32.77■■■□□ 2.84
U2AF1-201ENST00000291552 DUOX1Q9NRD9 1551 aa32.76■■■□□ 2.84
U2AF1-201ENST00000291552 LDHDQ86WU2 507 aa32.76■■■□□ 2.83
U2AF1-201ENST00000291552 LARGE2Q8N3Y3 721 aa32.76■■■□□ 2.83
U2AF1-201ENST00000291552 ATP5J2-PTCD1G3V325 749 aa32.75■■■□□ 2.83
U2AF1-201ENST00000291552 ELL2O00472 640 aaPredicted RBP32.74■■■□□ 2.83
U2AF1-201ENST00000291552 CALD1Q05682 793 aaKnown RBP32.74■■■□□ 2.83
U2AF1-201ENST00000291552 C8orf58Q8NAV2 365 aa32.74■■■□□ 2.83
U2AF1-201ENST00000291552 EPHX2P34913 555 aa32.73■■■□□ 2.83
U2AF1-201ENST00000291552 PHAXQ9H814 394 aaKnown RBP32.73■■■□□ 2.83
U2AF1-201ENST00000291552 PASKQ96RG2 1323 aa32.73■■■□□ 2.83
U2AF1-201ENST00000291552 EAPPQ56P03 285 aaPredicted RBP32.72■■■□□ 2.83
U2AF1-201ENST00000291552 FAM89AQ96GI7 184 aa32.72■■■□□ 2.83
U2AF1-201ENST00000291552 RTFDC1Q9BY42 306 aaPredicted RBP32.72■■■□□ 2.83
U2AF1-201ENST00000291552 BBOX1O75936 387 aa32.71■■■□□ 2.83
U2AF1-201ENST00000291552 EIF6P56537 245 aaKnown RBP32.71■■■□□ 2.83
U2AF1-201ENST00000291552 GRAPQ13588 217 aa32.71■■■□□ 2.83
U2AF1-201ENST00000291552 AOC3Q16853 763 aa32.71■■■□□ 2.83
U2AF1-201ENST00000291552 DDX46Q7L014 1031 aaKnown RBP32.71■■■□□ 2.83
U2AF1-201ENST00000291552 SP8Q8IXZ3 490 aa32.71■■■□□ 2.83
U2AF1-201ENST00000291552 GRAPLQ8TC17 118 aaPredicted RBP32.71■■■□□ 2.83
U2AF1-201ENST00000291552 PPIP5K2O43314 1243 aa32.7■■■□□ 2.83
U2AF1-201ENST00000291552 GJA3Q9Y6H8 435 aa32.7■■■□□ 2.83
U2AF1-201ENST00000291552 TRIM28Q13263 835 aaKnown RBP32.69■■■□□ 2.82
U2AF1-201ENST00000291552 IFFO2Q5TF58 517 aa32.69■■■□□ 2.82
U2AF1-201ENST00000291552 ITGBL1O95965 494 aaPredicted RBP32.68■■■□□ 2.82
U2AF1-201ENST00000291552 SCNN1DP51172 638 aa32.68■■■□□ 2.82
U2AF1-201ENST00000291552 NIM1KQ8IY84 436 aa32.68■■■□□ 2.82
U2AF1-201ENST00000291552 CREBZFQ9NS37 354 aa32.68■■■□□ 2.82
U2AF1-201ENST00000291552 TSPYL6Q8N831 410 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms