RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 NBPF7P0C2Y1 421 aaPredicted RBP12.38□□□□□ -0.43
SKA1-201ENST00000285116 ECHDC1Q9NTX5 307 aa12.38□□□□□ -0.43
SKA1-201ENST00000285116 ELP1O95163 1332 aa12.37□□□□□ -0.43
SKA1-201ENST00000285116 MST1RQ04912 1400 aa12.37□□□□□ -0.43
SKA1-201ENST00000285116 PSME1Q06323 249 aa12.37□□□□□ -0.43
SKA1-201ENST00000285116 ABTB2Q8N961 1025 aa12.37□□□□□ -0.43
SKA1-201ENST00000285116 EVI5LQ96CN4 794 aa12.37□□□□□ -0.43
SKA1-201ENST00000285116 SMC3Q9UQE7 1217 aa12.37□□□□□ -0.43
SKA1-201ENST00000285116 SETD1BQ9UPS6 1966 aaKnown RBP12.37□□□□□ -0.43
SKA1-201ENST00000285116 NECTIN1Q15223 517 aa12.37□□□□□ -0.43
SKA1-201ENST00000285116 DBF4Q9UBU7 674 aaPredicted RBP12.37□□□□□ -0.43
SKA1-201ENST00000285116 KDM4AO75164 1064 aa12.36□□□□□ -0.43
SKA1-201ENST00000285116 AMOTQ4VCS5 1084 aa12.36□□□□□ -0.43
SKA1-201ENST00000285116 PPP4R3CPQ6ZMV5 832 aa12.36□□□□□ -0.43
SKA1-201ENST00000285116 MPNDQ8N594 471 aa12.36□□□□□ -0.43
SKA1-201ENST00000285116 ANKRD7Q92527 254 aa12.36□□□□□ -0.43
SKA1-201ENST00000285116 CHPF2Q9P2E5 772 aa12.36□□□□□ -0.43
SKA1-201ENST00000285116 MTMR6Q9Y217 621 aa12.36□□□□□ -0.43
SKA1-201ENST00000285116 CNPY2Q9Y2B0 182 aa12.36□□□□□ -0.43
SKA1-201ENST00000285116 RFX7Q2KHR2 1363 aa12.36□□□□□ -0.43
SKA1-201ENST00000285116 TRPM3Q9HCF6 1732 aaPredicted RBP12.36□□□□□ -0.43
SKA1-201ENST00000285116 SCN11AQ9UI33 1791 aa12.36□□□□□ -0.43
SKA1-201ENST00000285116 CLASRPQ8N2M8 674 aaKnown RBP12.36□□□□□ -0.43
SKA1-201ENST00000285116 C17orf53Q8N3J3 647 aaPredicted RBP12.36□□□□□ -0.43
SKA1-201ENST00000285116 MYH15Q9Y2K3 1946 aa12.35□□□□□ -0.43
SKA1-201ENST00000285116 PI4KAP2A4QPH2 592 aa12.35□□□□□ -0.43
SKA1-201ENST00000285116 CHRNA2Q15822 529 aa12.35□□□□□ -0.43
SKA1-201ENST00000285116 PI4KAP1Q8N8J0 262 aa12.35□□□□□ -0.43
SKA1-201ENST00000285116 KCNH5Q8NCM2 988 aa12.35□□□□□ -0.43
SKA1-201ENST00000285116 KIAA1524Q8TCG1 905 aa12.35□□□□□ -0.43
SKA1-201ENST00000285116 NECTIN2Q92692 538 aa12.35□□□□□ -0.43
SKA1-201ENST00000285116 CYP46A1Q9Y6A2 500 aa12.35□□□□□ -0.43
SKA1-201ENST00000285116 TSGA10IPQ3SY00 556 aa12.35□□□□□ -0.43
SKA1-201ENST00000285116 TAF3Q5VWG9 929 aa12.35□□□□□ -0.43
SKA1-201ENST00000285116 FEZ1Q99689 392 aa12.35□□□□□ -0.43
SKA1-201ENST00000285116 FGD1P98174 961 aa12.34□□□□□ -0.43
SKA1-201ENST00000285116 MAP4K1Q92918 833 aa12.34□□□□□ -0.43
SKA1-201ENST00000285116 GDPD2Q9HCC8 539 aa12.34□□□□□ -0.43
SKA1-201ENST00000285116 PDRG1Q9NUG6 133 aa12.34□□□□□ -0.43
SKA1-201ENST00000285116 COL15A1P39059 1388 aa12.34□□□□□ -0.43
SKA1-201ENST00000285116 FAM177BA6PVY3 158 aa12.34□□□□□ -0.43
SKA1-201ENST00000285116 CTIFO43310 598 aaKnown RBP12.34□□□□□ -0.43
SKA1-201ENST00000285116 HCLS1P14317 486 aaPredicted RBP12.34□□□□□ -0.43
SKA1-201ENST00000285116 CASTP20810 708 aaKnown RBP12.34□□□□□ -0.43
SKA1-201ENST00000285116 KSR2Q6VAB6 950 aa12.34□□□□□ -0.43
SKA1-201ENST00000285116 NOL8Q76FK4 1167 aaKnown RBP12.34□□□□□ -0.43
SKA1-201ENST00000285116 MED23Q9ULK4 1368 aa12.34□□□□□ -0.43
SKA1-201ENST00000285116 C5P01031 1676 aa12.34□□□□□ -0.43
SKA1-201ENST00000285116 PLEKHO1Q53GL0 409 aaPredicted RBP12.34□□□□□ -0.43
SKA1-201ENST00000285116 CWC27Q6UX04 472 aaKnown RBP12.34□□□□□ -0.43
SKA1-201ENST00000285116 NPHP4O75161 1426 aaPredicted RBP12.33□□□□□ -0.44
SKA1-201ENST00000285116 RIOK3O14730 519 aaKnown RBP12.33□□□□□ -0.44
SKA1-201ENST00000285116 ANKRD1Q15327 319 aa12.33□□□□□ -0.44
SKA1-201ENST00000285116 NBPF6Q5VWK0 638 aa12.33□□□□□ -0.44
SKA1-201ENST00000285116 NBPF4Q96M43 638 aa12.33□□□□□ -0.44
SKA1-201ENST00000285116 PXDNQ92626 1479 aa12.33□□□□□ -0.44
SKA1-201ENST00000285116 SPDYE4A6NLX3 237 aa12.33□□□□□ -0.44
SKA1-201ENST00000285116 PSMA5P28066 241 aa12.33□□□□□ -0.44
SKA1-201ENST00000285116 GJB2P29033 226 aa12.33□□□□□ -0.44
SKA1-201ENST00000285116 PTH1RQ03431 593 aa12.33□□□□□ -0.44
SKA1-201ENST00000285116 ST3GAL1Q11201 340 aa12.33□□□□□ -0.44
SKA1-201ENST00000285116 PHF8Q9UPP1 1060 aa12.33□□□□□ -0.44
SKA1-201ENST00000285116 KIF1AQ12756 1690 aa12.32□□□□□ -0.44
SKA1-201ENST00000285116 GOLGA6L6A8MZA4 724 aa12.32□□□□□ -0.44
SKA1-201ENST00000285116 LARGE1O95461 756 aa12.32□□□□□ -0.44
SKA1-201ENST00000285116 PDCP20941 246 aa12.32□□□□□ -0.44
SKA1-201ENST00000285116 TICAM2Q86XR7 235 aa12.32□□□□□ -0.44
SKA1-201ENST00000285116 LGR6Q9HBX8 967 aa12.32□□□□□ -0.44
SKA1-201ENST00000285116 A0A0G2JS52 829 aa12.32□□□□□ -0.44
SKA1-201ENST00000285116 BTBD11A6QL63 1104 aa12.32□□□□□ -0.44
SKA1-201ENST00000285116 GIGYF1O75420 1035 aaPredicted RBP12.32□□□□□ -0.44
SKA1-201ENST00000285116 ZKSCAN1P17029 563 aaPredicted RBP12.32□□□□□ -0.44
SKA1-201ENST00000285116 FOXD4L6Q3SYB3 417 aaPredicted RBP12.32□□□□□ -0.44
SKA1-201ENST00000285116 FOXD4L3Q6VB84 417 aaPredicted RBP12.32□□□□□ -0.44
SKA1-201ENST00000285116 LINS1Q8NG48 757 aa12.32□□□□□ -0.44
SKA1-201ENST00000285116 JAKMIP1Q96N16 626 aaKnown RBP12.32□□□□□ -0.44
SKA1-201ENST00000285116 HMG20BQ9P0W2 317 aa12.32□□□□□ -0.44
SKA1-201ENST00000285116 RNMTO43148 476 aaKnown RBP12.31□□□□□ -0.44
SKA1-201ENST00000285116 MAP4K4O95819 1239 aaPredicted RBP12.31□□□□□ -0.44
SKA1-201ENST00000285116 U2AF2P26368 475 aaKnown RBP eCLIP12.31□□□□□ -0.44
SKA1-201ENST00000285116 RBM43Q6ZSC3 357 aaKnown RBP12.31□□□□□ -0.44
SKA1-201ENST00000285116 SPG7Q9UQ90 795 aa12.31□□□□□ -0.44
SKA1-201ENST00000285116 TMEM94Q12767 1356 aa12.31□□□□□ -0.44
SKA1-201ENST00000285116 IFIT2P09913 472 aaKnown RBP12.31□□□□□ -0.44
SKA1-201ENST00000285116 ATF3P18847 181 aa12.31□□□□□ -0.44
SKA1-201ENST00000285116 TEFQ10587 303 aa12.31□□□□□ -0.44
SKA1-201ENST00000285116 SYCP1Q15431 976 aa12.31□□□□□ -0.44
SKA1-201ENST00000285116 CREB3L3Q68CJ9 461 aa12.31□□□□□ -0.44
SKA1-201ENST00000285116 OGFRQ9NZT2 677 aa12.31□□□□□ -0.44
SKA1-201ENST00000285116 KCNF1Q9H3M0 494 aa12.31□□□□□ -0.44
SKA1-201ENST00000285116 LAMB4A4D0S4 1761 aa12.3□□□□□ -0.44
SKA1-201ENST00000285116 ME3Q16798 604 aa12.3□□□□□ -0.44
SKA1-201ENST00000285116 ADCK5Q3MIX3 580 aa12.3□□□□□ -0.44
SKA1-201ENST00000285116 USPL1Q5W0Q7 1092 aa12.3□□□□□ -0.44
SKA1-201ENST00000285116 PYCARDQ9ULZ3 195 aa12.3□□□□□ -0.44
SKA1-201ENST00000285116 MAP3K2Q9Y2U5 619 aa12.3□□□□□ -0.44
SKA1-201ENST00000285116 RBM8AQ9Y5S9 174 aaKnown RBP12.3□□□□□ -0.44
SKA1-201ENST00000285116 EIF2S2P20042 333 aaKnown RBP12.3□□□□□ -0.44
SKA1-201ENST00000285116 RNF20Q5VTR2 975 aa12.3□□□□□ -0.44
SKA1-201ENST00000285116 PRPF40BQ6NWY9 871 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms