RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 PAPPAQ13219 1627 aa22.16■■□□□ 1.14
PDLIM3-201ENST00000284767 TUBGCP6Q96RT7 1819 aa22.16■■□□□ 1.14
PDLIM3-201ENST00000284767 TERF1P54274 439 aa22.16■■□□□ 1.14
PDLIM3-201ENST00000284767 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.16■■□□□ 1.14
PDLIM3-201ENST00000284767 PLBD2Q8NHP8 589 aa22.16■■□□□ 1.14
PDLIM3-201ENST00000284767 DISP2A7MBM2 1401 aa22.16■■□□□ 1.14
PDLIM3-201ENST00000284767 ARFGEF2Q9Y6D5 1785 aa22.15■■□□□ 1.14
PDLIM3-201ENST00000284767 NCLP19338 710 aaKnown RBP22.15■■□□□ 1.14
PDLIM3-201ENST00000284767 KIAA1211Q6ZU35 1233 aa22.15■■□□□ 1.14
PDLIM3-201ENST00000284767 TNS2Q63HR2 1409 aa22.15■■□□□ 1.14
PDLIM3-201ENST00000284767 PI4K2BQ8TCG2 481 aa22.15■■□□□ 1.14
PDLIM3-201ENST00000284767 SYTL4Q96C24 671 aaPredicted RBP22.15■■□□□ 1.14
PDLIM3-201ENST00000284767 PDLIM2Q96JY6 352 aa22.14■■□□□ 1.14
PDLIM3-201ENST00000284767 COL22A1Q8NFW1 1626 aaPredicted RBP22.14■■□□□ 1.13
PDLIM3-201ENST00000284767 A0A087WZG4 1122 aa22.14■■□□□ 1.13
PDLIM3-201ENST00000284767 PKP1Q13835 747 aa22.14■■□□□ 1.13
PDLIM3-201ENST00000284767 DNAJC10Q8IXB1 793 aa22.14■■□□□ 1.13
PDLIM3-201ENST00000284767 ATG3Q9NT62 314 aa22.14■■□□□ 1.13
PDLIM3-201ENST00000284767 AFDNP55196 1824 aaKnown RBP22.13■■□□□ 1.13
PDLIM3-201ENST00000284767 SASH1O94885 1247 aa22.13■■□□□ 1.13
PDLIM3-201ENST00000284767 HSP90AB4PQ58FF6 505 aa22.13■■□□□ 1.13
PDLIM3-201ENST00000284767 PHLPP1O60346 1717 aa22.12■■□□□ 1.13
PDLIM3-201ENST00000284767 ERC2O15083 957 aa22.12■■□□□ 1.13
PDLIM3-201ENST00000284767 IL25Q9H293 177 aa22.12■■□□□ 1.13
PDLIM3-201ENST00000284767 RBSNQ9H1K0 784 aa22.12■■□□□ 1.13
PDLIM3-201ENST00000284767 EXOC5O00471 708 aa22.11■■□□□ 1.13
PDLIM3-201ENST00000284767 CHMLP26374 656 aa22.11■■□□□ 1.13
PDLIM3-201ENST00000284767 NOL7Q9UMY1 257 aaKnown RBP22.11■■□□□ 1.13
PDLIM3-201ENST00000284767 HDAC5Q9UQL6 1122 aa22.11■■□□□ 1.13
PDLIM3-201ENST00000284767 PRPF40AO75400 957 aaKnown RBP22.11■■□□□ 1.13
PDLIM3-201ENST00000284767 ZGPATQ8N5A5 531 aaKnown RBP22.11■■□□□ 1.13
PDLIM3-201ENST00000284767 CLASRPQ8N2M8 674 aaKnown RBP22.1■■□□□ 1.13
PDLIM3-201ENST00000284767 ZDHHC9Q9Y397 364 aa22.1■■□□□ 1.13
PDLIM3-201ENST00000284767 GPT2Q8TD30 523 aa22.1■■□□□ 1.13
PDLIM3-201ENST00000284767 ESYT1Q9BSJ8 1104 aa22.1■■□□□ 1.13
PDLIM3-201ENST00000284767 ITGB4P16144 1822 aa22.09■■□□□ 1.13
PDLIM3-201ENST00000284767 A0A0G2JS52 829 aa22.09■■□□□ 1.13
PDLIM3-201ENST00000284767 PRIM1P49642 420 aaKnown RBP22.09■■□□□ 1.13
PDLIM3-201ENST00000284767 AACSQ86V21 672 aa22.09■■□□□ 1.13
PDLIM3-201ENST00000284767 SLC4A9Q96Q91 983 aa22.09■■□□□ 1.13
PDLIM3-201ENST00000284767 ZNF500O60304 480 aaPredicted RBP22.09■■□□□ 1.13
PDLIM3-201ENST00000284767 G3BP1Q13283 466 aaKnown RBP eCLIP22.09■■□□□ 1.13
PDLIM3-201ENST00000284767 PDCL3Q9H2J4 239 aa22.09■■□□□ 1.13
PDLIM3-201ENST00000284767 AOX1Q06278 1338 aa22.08■■□□□ 1.13
PDLIM3-201ENST00000284767 CASP7P55210 303 aa22.08■■□□□ 1.13
PDLIM3-201ENST00000284767 EAF2Q96CJ1 260 aaPredicted RBP22.08■■□□□ 1.13
PDLIM3-201ENST00000284767 CCDC8Q9H0W5 538 aaPredicted RBP22.08■■□□□ 1.13
PDLIM3-201ENST00000284767 TLR7Q9NYK1 1049 aaKnown RBP22.08■■□□□ 1.13
PDLIM3-201ENST00000284767 PLCH1Q4KWH8 1693 aa22.08■■□□□ 1.13
PDLIM3-201ENST00000284767 MCM2P49736 904 aa22.07■■□□□ 1.12
PDLIM3-201ENST00000284767 LRSAM1Q6UWE0 723 aa22.07■■□□□ 1.12
PDLIM3-201ENST00000284767 MBD3O95983 291 aa22.06■■□□□ 1.12
PDLIM3-201ENST00000284767 IFIT2P09913 472 aaKnown RBP22.06■■□□□ 1.12
PDLIM3-201ENST00000284767 MCM5P33992 734 aa22.06■■□□□ 1.12
PDLIM3-201ENST00000284767 BCL9O00512 1426 aa22.05■■□□□ 1.12
PDLIM3-201ENST00000284767 RFX5P48382 616 aaPredicted RBP22.05■■□□□ 1.12
PDLIM3-201ENST00000284767 ERC1Q8IUD2 1116 aa22.05■■□□□ 1.12
PDLIM3-201ENST00000284767 ANO2Q9NQ90 1003 aa22.05■■□□□ 1.12
PDLIM3-201ENST00000284767 SPATA31A1Q5TZJ5 1347 aa22.05■■□□□ 1.12
PDLIM3-201ENST00000284767 NUP188Q5SRE5 1749 aa22.05■■□□□ 1.12
PDLIM3-201ENST00000284767 PTPN12Q05209 780 aaKnown RBP22.05■■□□□ 1.12
PDLIM3-201ENST00000284767 LMBR1LQ6UX01 489 aa22.05■■□□□ 1.12
PDLIM3-201ENST00000284767 CHMP3Q9Y3E7 222 aa22.05■■□□□ 1.12
PDLIM3-201ENST00000284767 CCDC9Q9Y3X0 531 aaKnown RBP22.05■■□□□ 1.12
PDLIM3-201ENST00000284767 VSIG10Q8N0Z9 540 aa22.04■■□□□ 1.12
PDLIM3-201ENST00000284767 ACSBG1Q96GR2 724 aa22.04■■□□□ 1.12
PDLIM3-201ENST00000284767 CWC25Q9NXE8 425 aaPredicted RBP22.04■■□□□ 1.12
PDLIM3-201ENST00000284767 RBM27Q9P2N5 1060 aaKnown RBP22.04■■□□□ 1.12
PDLIM3-201ENST00000284767 RABL6Q3YEC7 729 aaPredicted RBP22.03■■□□□ 1.12
PDLIM3-201ENST00000284767 ECHDC1Q9NTX5 307 aa22.03■■□□□ 1.12
PDLIM3-201ENST00000284767 TMEM63CQ9P1W3 806 aa22.03■■□□□ 1.12
PDLIM3-201ENST00000284767 H7C1W4 665 aa22.03■■□□□ 1.12
PDLIM3-201ENST00000284767 TOM1O60784 492 aa22.03■■□□□ 1.12
PDLIM3-201ENST00000284767 USP42Q9H9J4 1324 aaKnown RBP22.03■■□□□ 1.12
PDLIM3-201ENST00000284767 FOXO4P98177 505 aa22.02■■□□□ 1.12
PDLIM3-201ENST00000284767 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.02■■□□□ 1.12
PDLIM3-201ENST00000284767 PALD1Q9ULE6 856 aa22.02■■□□□ 1.12
PDLIM3-201ENST00000284767 ZKSCAN5Q9Y2L8 839 aa22.02■■□□□ 1.12
PDLIM3-201ENST00000284767 DDB1Q16531 1140 aa22.02■■□□□ 1.12
PDLIM3-201ENST00000284767 TTC41PQ6P2S7 1318 aa22.02■■□□□ 1.12
PDLIM3-201ENST00000284767 GLRX3O76003 335 aaKnown RBP22.01■■□□□ 1.11
PDLIM3-201ENST00000284767 TMX3Q96JJ7 454 aa22.01■■□□□ 1.11
PDLIM3-201ENST00000284767 NEK4P51957 841 aa22.01■■□□□ 1.11
PDLIM3-201ENST00000284767 CNTROBQ8N137 903 aa22.01■■□□□ 1.11
PDLIM3-201ENST00000284767 COPRSQ9NQ92 184 aa22.01■■□□□ 1.11
PDLIM3-201ENST00000284767 NRAPQ86VF7 1730 aa22.01■■□□□ 1.11
PDLIM3-201ENST00000284767 CUL4AQ13619 759 aa22■■□□□ 1.11
PDLIM3-201ENST00000284767 CSPP1Q1MSJ5 1256 aa22■■□□□ 1.11
PDLIM3-201ENST00000284767 CCDC39Q9UFE4 941 aa22■■□□□ 1.11
PDLIM3-201ENST00000284767 SYCE3A1L190 88 aa22■■□□□ 1.11
PDLIM3-201ENST00000284767 UBAP1LF5GYI3 381 aa22■■□□□ 1.11
PDLIM3-201ENST00000284767 BRD1O95696 1058 aa22■■□□□ 1.11
PDLIM3-201ENST00000284767 STARD3NLO95772 234 aa22■■□□□ 1.11
PDLIM3-201ENST00000284767 MCCP23508 829 aa22■■□□□ 1.11
PDLIM3-201ENST00000284767 TFCP2Q12800 502 aa22■■□□□ 1.11
PDLIM3-201ENST00000284767 CWC27Q6UX04 472 aaKnown RBP22■■□□□ 1.11
PDLIM3-201ENST00000284767 ZBTB1Q9Y2K1 713 aa22■■□□□ 1.11
PDLIM3-201ENST00000284767 TJP1Q07157 1748 aa22■■□□□ 1.11
PDLIM3-201ENST00000284767 WNK3Q9BYP7 1800 aa22■■□□□ 1.11
PDLIM3-201ENST00000284767 ANAPC15P60006 121 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms