RNA–Protein interactions for RNA: ENST00000284041.7

SREK1-201, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 3,751 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-201ENST00000284041 FAN1Q9Y2M0 1017 aa5.36□□□□□ -1.55
SREK1-201ENST00000284041 COL4A3BPQ9Y5P4 624 aa5.36□□□□□ -1.55
SREK1-201ENST00000284041 FAM83GA6ND36 823 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 A6NJY4 79 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 CCDC85CA6NKD9 419 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 ACPPP15309 386 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 NOL8Q76FK4 1167 aaKnown RBP5.35□□□□□ -1.55
SREK1-201ENST00000284041 TMA7Q9Y2S6 64 aaKnown RBP5.35□□□□□ -1.55
SREK1-201ENST00000284041 LEMD3Q9Y2U8 911 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 CLSTN1O94985 981 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 GRIN2CQ14957 1233 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 TNKS2Q9H2K2 1166 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 NLRP2Q9NX02 1062 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 GGT7Q9UJ14 662 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 ESYT3A0FGR9 886 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 ARID5AQ03989 594 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 SLC10A4Q96EP9 437 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 MYO19Q96H55 970 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 DMRTB1Q96MA1 342 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.35□□□□□ -1.558e-9■■■□□ 14.8
SREK1-201ENST00000284041 NEUROD4Q9HD90 331 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 GINM1Q9NU53 330 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 KCNMB2Q9Y691 235 aa5.35□□□□□ -1.55
SREK1-201ENST00000284041 FAM205CA6NFA0 338 aa5.34□□□□□ -1.55
SREK1-201ENST00000284041 PPP1R12BO60237 982 aaPredicted RBP5.34□□□□□ -1.55
SREK1-201ENST00000284041 TNFRSF21O75509 655 aa5.34□□□□□ -1.55
SREK1-201ENST00000284041 MRPL50Q8N5N7 158 aaKnown RBP5.34□□□□□ -1.55
SREK1-201ENST00000284041 SMTNP53814 917 aa5.34□□□□□ -1.55
SREK1-201ENST00000284041 LRRC41Q15345 812 aa5.34□□□□□ -1.55
SREK1-201ENST00000284041 ZNF687Q8N1G0 1237 aa5.34□□□□□ -1.55
SREK1-201ENST00000284041 RASGRP4Q8TDF6 673 aa5.34□□□□□ -1.55
SREK1-201ENST00000284041 UBP1Q9NZI7 540 aa5.34□□□□□ -1.55
SREK1-201ENST00000284041 ENPP3O14638 875 aa5.34□□□□□ -1.56
SREK1-201ENST00000284041 SH3TC2Q8TF17 1288 aa5.34□□□□□ -1.56
SREK1-201ENST00000284041 PMM1Q92871 262 aa5.34□□□□□ -1.56
SREK1-201ENST00000284041 HSH2DQ96JZ2 352 aa5.34□□□□□ -1.56
SREK1-201ENST00000284041 CNTN3Q9P232 1028 aa5.34□□□□□ -1.56
SREK1-201ENST00000284041 PPT2Q9UMR5 302 aa5.34□□□□□ -1.56
SREK1-201ENST00000284041 LSM11P83369 360 aaKnown RBP eCLIP5.33□□□□□ -1.56
SREK1-201ENST00000284041 FILIP1Q7Z7B0 1213 aa5.33□□□□□ -1.56
SREK1-201ENST00000284041 FBXO27Q8NI29 283 aa5.33□□□□□ -1.56
SREK1-201ENST00000284041 CHPF2Q9P2E5 772 aa5.33□□□□□ -1.56
SREK1-201ENST00000284041 BPHLQ86WA6 291 aaPredicted RBP5.33□□□□□ -1.56
SREK1-201ENST00000284041 ARMC5Q96C12 935 aa5.33□□□□□ -1.56
SREK1-201ENST00000284041 HS3ST6Q96QI5 342 aa5.33□□□□□ -1.56
SREK1-201ENST00000284041 TRPA1O75762 1119 aa5.33□□□□□ -1.56
SREK1-201ENST00000284041 PPP4CP60510 307 aa5.33□□□□□ -1.56
SREK1-201ENST00000284041 C1orf53Q5VUE5 145 aa5.33□□□□□ -1.56
SREK1-201ENST00000284041 ZNF526Q8TF50 670 aaPredicted RBP5.33□□□□□ -1.56
SREK1-201ENST00000284041 MSRB2Q9Y3D2 182 aa5.33□□□□□ -1.56
SREK1-201ENST00000284041 SIAH2O43255 324 aa5.32□□□□□ -1.56
SREK1-201ENST00000284041 PAGE1O75459 146 aa5.32□□□□□ -1.56
SREK1-201ENST00000284041 USP17L7P0C7H9 530 aa5.32□□□□□ -1.56
SREK1-201ENST00000284041 L3MBTL2Q969R5 705 aa5.32□□□□□ -1.56
SREK1-201ENST00000284041 CCDC74AQ96AQ1 378 aa5.32□□□□□ -1.56
SREK1-201ENST00000284041 TREML1Q86YW5 311 aa5.32□□□□□ -1.56
SREK1-201ENST00000284041 GPRASP2Q96D09 838 aa5.32□□□□□ -1.56
SREK1-201ENST00000284041 ERBB3P21860 1342 aa5.32□□□□□ -1.56
SREK1-201ENST00000284041 EREGO14944 169 aa5.32□□□□□ -1.56
SREK1-201ENST00000284041 CYP2E1P05181 493 aaPredicted RBP5.32□□□□□ -1.56
SREK1-201ENST00000284041 AGERQ15109 404 aa5.32□□□□□ -1.56
SREK1-201ENST00000284041 SHDQ96IW2 340 aa5.32□□□□□ -1.56
SREK1-201ENST00000284041 KRTAP3-3Q9BYR6 98 aa5.32□□□□□ -1.56
SREK1-201ENST00000284041 KRTAP3-2Q9BYR7 98 aa5.32□□□□□ -1.56
SREK1-201ENST00000284041 LRRC4BQ9NT99 713 aa5.32□□□□□ -1.56
SREK1-201ENST00000284041 TSR3Q9UJK0 312 aaKnown RBP5.32□□□□□ -1.56
SREK1-201ENST00000284041 MAFGO15525 162 aa5.31□□□□□ -1.56
SREK1-201ENST00000284041 SELPP16109 830 aa5.31□□□□□ -1.56
SREK1-201ENST00000284041 SEPT6Q14141 434 aa5.31□□□□□ -1.56
SREK1-201ENST00000284041 GRM2Q14416 872 aa5.31□□□□□ -1.56
SREK1-201ENST00000284041 RHOVQ96L33 236 aa5.31□□□□□ -1.56
SREK1-201ENST00000284041 HHIPQ96QV1 700 aa5.31□□□□□ -1.56
SREK1-201ENST00000284041 DNAJC7Q99615 494 aa5.31□□□□□ -1.56
SREK1-201ENST00000284041 DDX56Q9NY93 547 aaKnown RBP5.31□□□□□ -1.56
SREK1-201ENST00000284041 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.31□□□□□ -1.56
SREK1-201ENST00000284041 ADH1BP00325 375 aa5.31□□□□□ -1.56
SREK1-201ENST00000284041 MRM1Q6IN84 353 aaKnown RBP5.31□□□□□ -1.56
SREK1-201ENST00000284041 CNKSR1Q969H4 720 aa5.31□□□□□ -1.56
SREK1-201ENST00000284041 KLF16Q9BXK1 252 aaPredicted RBP5.31□□□□□ -1.56
SREK1-201ENST00000284041 XRCC5P13010 732 aaKnown RBP5.31□□□□□ -1.56
SREK1-201ENST00000284041 NASPP49321 788 aaPredicted RBP5.31□□□□□ -1.56
SREK1-201ENST00000284041 FAM160A1Q05DH4 1040 aa5.31□□□□□ -1.56
SREK1-201ENST00000284041 SPATC1Q76KD6 591 aa5.31□□□□□ -1.56
SREK1-201ENST00000284041 SLC4A3P48751 1232 aa5.3□□□□□ -1.56
SREK1-201ENST00000284041 SETQ01105 290 aaPredicted RBP5.3□□□□□ -1.56
SREK1-201ENST00000284041 CBX2Q14781 532 aaPredicted RBP5.3□□□□□ -1.56
SREK1-201ENST00000284041 PPP1R26Q5T8A7 1209 aaPredicted RBP5.3□□□□□ -1.56
SREK1-201ENST00000284041 CITED4Q96RK1 184 aa5.3□□□□□ -1.56
SREK1-201ENST00000284041 FANCLQ9NW38 375 aa5.3□□□□□ -1.56
SREK1-201ENST00000284041 EFR3BQ9Y2G0 817 aa5.3□□□□□ -1.56
SREK1-201ENST00000284041 NOP58Q9Y2X3 529 aaKnown RBP5.3□□□□□ -1.56
SREK1-201ENST00000284041 CCDC194A0A1B0GVG4 234 aa5.3□□□□□ -1.56
SREK1-201ENST00000284041 DIAPH1O60610 1272 aaKnown RBP5.3□□□□□ -1.56
SREK1-201ENST00000284041 NR1I2O75469 434 aa5.3□□□□□ -1.56
SREK1-201ENST00000284041 THBS1P07996 1170 aa5.3□□□□□ -1.56
SREK1-201ENST00000284041 HIRAP54198 1017 aaPredicted RBP5.3□□□□□ -1.56
SREK1-201ENST00000284041 RAB33AQ14088 237 aa5.3□□□□□ -1.56
SREK1-201ENST00000284041 C8orf34Q49A92 452 aa5.3□□□□□ -1.56
SREK1-201ENST00000284041 ANKS3Q6ZW76 656 aa5.3□□□□□ -1.56
SREK1-201ENST00000284041 HS2ST1Q7LGA3 356 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms