RNA–Protein interactions for RNA: ENST00000283179.14

HNRNPU-201, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HNRNPU, Length 3,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-201ENST00000283179 ZNF592Q92610 1267 aa18.17■□□□□ 0.5
HNRNPU-201ENST00000283179 DDX11Q96FC9 970 aa18.17■□□□□ 0.5
HNRNPU-201ENST00000283179 CCDC8Q9H0W5 538 aaPredicted RBP18.17■□□□□ 0.5
HNRNPU-201ENST00000283179 RBM8AQ9Y5S9 174 aaKnown RBP18.17■□□□□ 0.5
HNRNPU-201ENST00000283179 MRVI1Q9Y6F6 885 aa18.17■□□□□ 0.5
HNRNPU-201ENST00000283179 AOX1Q06278 1338 aa18.17■□□□□ 0.5
HNRNPU-201ENST00000283179 ZNF335Q9H4Z2 1342 aaPredicted RBP18.17■□□□□ 0.5
HNRNPU-201ENST00000283179 A0A087WWV3 80 aa18.16■□□□□ 0.5
HNRNPU-201ENST00000283179 IFIT2P09913 472 aaKnown RBP18.16■□□□□ 0.5
HNRNPU-201ENST00000283179 AACSQ86V21 672 aa18.16■□□□□ 0.5
HNRNPU-201ENST00000283179 TNMDQ9H2S6 317 aa18.16■□□□□ 0.5
HNRNPU-201ENST00000283179 XRN1Q8IZH2 1706 aaKnown RBP18.16■□□□□ 0.5
HNRNPU-201ENST00000283179 GLRX3O76003 335 aaKnown RBP18.16■□□□□ 0.5
HNRNPU-201ENST00000283179 KRT85P78386 507 aa18.16■□□□□ 0.5
HNRNPU-201ENST00000283179 DMTNQ08495 405 aa18.16■□□□□ 0.5
HNRNPU-201ENST00000283179 DNAAF4Q8WXU2 420 aa18.16■□□□□ 0.5
HNRNPU-201ENST00000283179 TMEM94Q12767 1356 aa18.16■□□□□ 0.5
HNRNPU-201ENST00000283179 ATF3P18847 181 aa18.16■□□□□ 0.5
HNRNPU-201ENST00000283179 CWF19L2Q2TBE0 894 aaKnown RBP18.16■□□□□ 0.5
HNRNPU-201ENST00000283179 FAM200AQ8TCP9 573 aa18.16■□□□□ 0.5
HNRNPU-201ENST00000283179 GOLGA6L6A8MZA4 724 aa18.15■□□□□ 0.5
HNRNPU-201ENST00000283179 ZKSCAN1P17029 563 aaPredicted RBP18.15■□□□□ 0.5
HNRNPU-201ENST00000283179 VPS53Q5VIR6 699 aa18.15■□□□□ 0.5
HNRNPU-201ENST00000283179 FBXW7Q969H0 707 aa18.15■□□□□ 0.5
HNRNPU-201ENST00000283179 IL17RAQ96F46 866 aa18.15■□□□□ 0.5
HNRNPU-201ENST00000283179 C9orf78Q9NZ63 289 aaPredicted RBP18.15■□□□□ 0.5
HNRNPU-201ENST00000283179 SBNO1A3KN83 1393 aa18.15■□□□□ 0.5
HNRNPU-201ENST00000283179 CBX8Q9HC52 389 aa18.15■□□□□ 0.5
HNRNPU-201ENST00000283179 CREB3L3Q68CJ9 461 aa18.14■□□□□ 0.5
HNRNPU-201ENST00000283179 LARP1Q6PKG0 1096 aaKnown RBP18.14■□□□□ 0.5
HNRNPU-201ENST00000283179 DNAJC25Q9H1X3 360 aa18.14■□□□□ 0.5
HNRNPU-201ENST00000283179 BOLA2Q9H3K6 86 aa18.14■□□□□ 0.5
HNRNPU-201ENST00000283179 KLHDC4Q8TBB5 520 aa18.14■□□□□ 0.49
HNRNPU-201ENST00000283179 BICD2Q8TD16 824 aa18.14■□□□□ 0.49
HNRNPU-201ENST00000283179 RUFY2Q8WXA3 655 aa18.14■□□□□ 0.49
HNRNPU-201ENST00000283179 EDC3Q96F86 508 aaKnown RBP18.14■□□□□ 0.49
HNRNPU-201ENST00000283179 ZSWIM6Q9HCJ5 1215 aa18.14■□□□□ 0.49
HNRNPU-201ENST00000283179 NDUFB9Q9Y6M9 179 aa18.14■□□□□ 0.49
HNRNPU-201ENST00000283179 CHD2O14647 1828 aaKnown RBP18.14■□□□□ 0.49
HNRNPU-201ENST00000283179 NMIQ13287 307 aaPredicted RBP18.14■□□□□ 0.49
HNRNPU-201ENST00000283179 BEND3Q5T5X7 828 aa18.14■□□□□ 0.49
HNRNPU-201ENST00000283179 SPATA32Q96LK8 384 aa18.14■□□□□ 0.49
HNRNPU-201ENST00000283179 TLR7Q9NYK1 1049 aaKnown RBP18.14■□□□□ 0.49
HNRNPU-201ENST00000283179 KDRP35968 1356 aa18.13■□□□□ 0.49
HNRNPU-201ENST00000283179 C19orf44Q9H6X5 657 aa18.13■□□□□ 0.49
HNRNPU-201ENST00000283179 ECHDC1Q9NTX5 307 aa18.13■□□□□ 0.49
HNRNPU-201ENST00000283179 MAP3K5Q99683 1374 aa18.13■□□□□ 0.49
HNRNPU-201ENST00000283179 FAM208AQ9UK61 1670 aaKnown RBP18.13■□□□□ 0.49
HNRNPU-201ENST00000283179 NR1I2O75469 434 aa18.13■□□□□ 0.49
HNRNPU-201ENST00000283179 HOXC9P31274 260 aa18.13■□□□□ 0.49
HNRNPU-201ENST00000283179 CCDC9Q9Y3X0 531 aaKnown RBP18.13■□□□□ 0.49
HNRNPU-201ENST00000283179 RGPD1P0DJD0 1748 aa18.13■□□□□ 0.49
HNRNPU-201ENST00000283179 CCDC171Q6TFL3 1326 aa18.13■□□□□ 0.49
HNRNPU-201ENST00000283179 CHGBP05060 677 aa18.12■□□□□ 0.49
HNRNPU-201ENST00000283179 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.12■□□□□ 0.49
HNRNPU-201ENST00000283179 V9GYY5 206 aaPredicted RBP18.12■□□□□ 0.49
HNRNPU-201ENST00000283179 USP31Q70CQ4 1352 aa18.12■□□□□ 0.49
HNRNPU-201ENST00000283179 PRAMEF22A3QJZ6 481 aa18.12■□□□□ 0.49
HNRNPU-201ENST00000283179 AIMP1Q12904 312 aaKnown RBP18.12■□□□□ 0.49
HNRNPU-201ENST00000283179 ARID5BQ14865 1188 aa18.12■□□□□ 0.49
HNRNPU-201ENST00000283179 A0A0D9SFI3 127 aa18.12■□□□□ 0.49
HNRNPU-201ENST00000283179 A0A0U1RQG5 324 aaPredicted RBP18.12■□□□□ 0.49
HNRNPU-201ENST00000283179 JAK2O60674 1132 aa18.12■□□□□ 0.49
HNRNPU-201ENST00000283179 NECTIN1Q15223 517 aa18.12■□□□□ 0.49
HNRNPU-201ENST00000283179 LMTK3Q96Q04 1460 aa18.11■□□□□ 0.49
HNRNPU-201ENST00000283179 PROSER3Q2NL68 480 aa18.11■□□□□ 0.49
HNRNPU-201ENST00000283179 MPRIPQ6WCQ1 1025 aa18.11■□□□□ 0.49
HNRNPU-201ENST00000283179 LRRC2Q9BYS8 371 aa18.11■□□□□ 0.49
HNRNPU-201ENST00000283179 SH2B1Q9NRF2 756 aaPredicted RBP18.11■□□□□ 0.49
HNRNPU-201ENST00000283179 ADGRL3Q9HAR2 1447 aa18.11■□□□□ 0.49
HNRNPU-201ENST00000283179 TNNT1P13805 278 aa18.1■□□□□ 0.49
HNRNPU-201ENST00000283179 ERCC4Q92889 916 aaPredicted RBP18.1■□□□□ 0.49
HNRNPU-201ENST00000283179 ZSCAN31Q96LW9 406 aaPredicted RBP18.1■□□□□ 0.49
HNRNPU-201ENST00000283179 FSD1Q9BTV5 496 aa18.1■□□□□ 0.49
HNRNPU-201ENST00000283179 MAP3K2Q9Y2U5 619 aa18.1■□□□□ 0.49
HNRNPU-201ENST00000283179 SLC27A2O14975 620 aa18.1■□□□□ 0.49
HNRNPU-201ENST00000283179 ZNF165P49910 485 aa18.09■□□□□ 0.49
HNRNPU-201ENST00000283179 NCBP1Q09161 790 aaKnown RBP18.09■□□□□ 0.49
HNRNPU-201ENST00000283179 BLOC1S2Q6QNY1 142 aa18.09■□□□□ 0.49
HNRNPU-201ENST00000283179 CCDC144BQ3MJ40 725 aa18.09■□□□□ 0.49
HNRNPU-201ENST00000283179 CCDC144CPQ8IYA2 1237 aa18.09■□□□□ 0.49
HNRNPU-201ENST00000283179 NALCNQ8IZF0 1738 aa18.09■□□□□ 0.49
HNRNPU-201ENST00000283179 TPD52L1Q16890 204 aaPredicted RBP18.09■□□□□ 0.49
HNRNPU-201ENST00000283179 ZNF589Q86UQ0 364 aaPredicted RBP18.09■□□□□ 0.49
HNRNPU-201ENST00000283179 EAF2Q96CJ1 260 aaPredicted RBP18.09■□□□□ 0.49
HNRNPU-201ENST00000283179 FTOQ9C0B1 505 aaKnown RBP eCLIP18.09■□□□□ 0.497e-8■■■■□ 22.1
HNRNPU-201ENST00000283179 CLIP2Q9UDT6 1046 aa18.09■□□□□ 0.49
HNRNPU-201ENST00000283179 EIF4A1P60842 406 aaKnown RBP18.08■□□□□ 0.49
HNRNPU-201ENST00000283179 CACTINQ8WUQ7 758 aaKnown RBP18.08■□□□□ 0.49
HNRNPU-201ENST00000283179 NPHP1O15259 732 aa18.08■□□□□ 0.48
HNRNPU-201ENST00000283179 EPB41L2O43491 1005 aaKnown RBP18.08■□□□□ 0.48
HNRNPU-201ENST00000283179 ZSCAN25Q6NSZ9 544 aa18.08■□□□□ 0.48
HNRNPU-201ENST00000283179 LEO1Q8WVC0 666 aaPredicted RBP18.08■□□□□ 0.48
HNRNPU-201ENST00000283179 TTC41PQ6P2S7 1318 aa18.08■□□□□ 0.48
HNRNPU-201ENST00000283179 HSP90AB4PQ58FF6 505 aa18.07■□□□□ 0.48
HNRNPU-201ENST00000283179 GPATCH3Q96I76 525 aa18.07■□□□□ 0.48
HNRNPU-201ENST00000283179 PGBD1Q96JS3 809 aa18.07■□□□□ 0.48
HNRNPU-201ENST00000283179 HSP90B1P14625 803 aaKnown RBP18.07■□□□□ 0.48
HNRNPU-201ENST00000283179 TEFQ10587 303 aa18.07■□□□□ 0.48
HNRNPU-201ENST00000283179 EVI5LQ96CN4 794 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms