RNA–Protein interactions for RNA: ENST00000275575.11

PHTF2-202, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-202ENST00000275575 CCDC27Q2M243 656 aa4.74□□□□□ -1.65
PHTF2-202ENST00000275575 POTEEQ6S8J3 1075 aa4.74□□□□□ -1.65
PHTF2-202ENST00000275575 DDX54Q8TDD1 881 aaKnown RBP4.74□□□□□ -1.65
PHTF2-202ENST00000275575 ERBB4Q15303 1308 aa4.73□□□□□ -1.65
PHTF2-202ENST00000275575 PODXL2Q9NZ53 605 aa4.73□□□□□ -1.65
PHTF2-202ENST00000275575 SPG7Q9UQ90 795 aa4.73□□□□□ -1.65
PHTF2-202ENST00000275575 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.73□□□□□ -1.65
PHTF2-202ENST00000275575 A1BGP04217 495 aa4.73□□□□□ -1.65
PHTF2-202ENST00000275575 SYNE4Q8N205 404 aa4.73□□□□□ -1.65
PHTF2-202ENST00000275575 ATP6V1AP38606 617 aa4.73□□□□□ -1.65
PHTF2-202ENST00000275575 HHIPL1Q96JK4 782 aa4.73□□□□□ -1.65
PHTF2-202ENST00000275575 LAMA5O15230 3695 aa4.72□□□□□ -1.65
PHTF2-202ENST00000275575 SHTN1A0MZ66 631 aa4.72□□□□□ -1.65
PHTF2-202ENST00000275575 IGKV5-2P06315 115 aa4.72□□□□□ -1.65
PHTF2-202ENST00000275575 TOMM70O94826 608 aa4.72□□□□□ -1.65
PHTF2-202ENST00000275575 SUSD4Q5VX71 490 aa4.72□□□□□ -1.65
PHTF2-202ENST00000275575 TRPM4Q8TD43 1214 aa4.72□□□□□ -1.65
PHTF2-202ENST00000275575 WBP1LQ9NX94 342 aa4.72□□□□□ -1.65
PHTF2-202ENST00000275575 SMCHD1A6NHR9 2005 aa4.72□□□□□ -1.65
PHTF2-202ENST00000275575 HTRA3P83110 453 aa4.72□□□□□ -1.65
PHTF2-202ENST00000275575 TTLL7Q6ZT98 887 aa4.72□□□□□ -1.65
PHTF2-202ENST00000275575 LAMA1P25391 3075 aa4.72□□□□□ -1.65
PHTF2-202ENST00000275575 C15orf52Q6ZUT6 534 aaKnown RBP4.71□□□□□ -1.65
PHTF2-202ENST00000275575 NLGN1Q8N2Q7 840 aa4.71□□□□□ -1.65
PHTF2-202ENST00000275575 RNF123Q5XPI4 1314 aa4.71□□□□□ -1.66
PHTF2-202ENST00000275575 MAP3K15Q6ZN16 1313 aa4.71□□□□□ -1.66
PHTF2-202ENST00000275575 GNPATO15228 680 aa4.71□□□□□ -1.66
PHTF2-202ENST00000275575 ZNF280AP59817 542 aaPredicted RBP4.71□□□□□ -1.66
PHTF2-202ENST00000275575 EIF4G2P78344 907 aaKnown RBP eCLIP4.71□□□□□ -1.663e-7■■■□□ 17
PHTF2-202ENST00000275575 SF3B3Q15393 1217 aaKnown RBP4.71□□□□□ -1.66
PHTF2-202ENST00000275575 PLA2G12BQ9BX93 195 aa4.71□□□□□ -1.66
PHTF2-202ENST00000275575 RPAP1Q9BWH6 1393 aaPredicted RBP4.71□□□□□ -1.66
PHTF2-202ENST00000275575 CSF1RP07333 972 aa4.71□□□□□ -1.66
PHTF2-202ENST00000275575 VPS33BQ9H267 617 aa4.71□□□□□ -1.66
PHTF2-202ENST00000275575 ABCC4O15439 1325 aa4.7□□□□□ -1.66
PHTF2-202ENST00000275575 BAZ2AQ9UIF9 1905 aaKnown RBP4.7□□□□□ -1.66
PHTF2-202ENST00000275575 MYH4Q9Y623 1939 aa4.7□□□□□ -1.66
PHTF2-202ENST00000275575 KRT24Q2M2I5 525 aa4.7□□□□□ -1.66
PHTF2-202ENST00000275575 ZNF384Q8TF68 577 aa4.7□□□□□ -1.66
PHTF2-202ENST00000275575 ZIC5Q96T25 663 aa4.7□□□□□ -1.66
PHTF2-202ENST00000275575 TMOD3Q9NYL9 352 aa4.7□□□□□ -1.66
PHTF2-202ENST00000275575 TFCP2L1Q9NZI6 479 aa4.7□□□□□ -1.66
PHTF2-202ENST00000275575 GNAT3A8MTJ3 354 aa4.7□□□□□ -1.66
PHTF2-202ENST00000275575 SERPINB2P05120 415 aa4.7□□□□□ -1.66
PHTF2-202ENST00000275575 BRPF1P55201 1214 aaPredicted RBP4.7□□□□□ -1.66
PHTF2-202ENST00000275575 CFAP54Q96N23 3096 aa4.7□□□□□ -1.66
PHTF2-202ENST00000275575 GRIN3BO60391 1043 aa4.69□□□□□ -1.66
PHTF2-202ENST00000275575 DCTN1Q14203 1278 aa4.69□□□□□ -1.66
PHTF2-202ENST00000275575 LMOD2Q6P5Q4 547 aa4.69□□□□□ -1.66
PHTF2-202ENST00000275575 MAP3K10Q02779 954 aa4.69□□□□□ -1.66
PHTF2-202ENST00000275575 PNISRQ8TF01 805 aaKnown RBP4.69□□□□□ -1.66
PHTF2-202ENST00000275575 KCNQ5Q9NR82 932 aa4.69□□□□□ -1.66
PHTF2-202ENST00000275575 KIAA1217Q5T5P2 1943 aa4.69□□□□□ -1.66
PHTF2-202ENST00000275575 AMPHP49418 695 aa4.69□□□□□ -1.66
PHTF2-202ENST00000275575 FOXO4P98177 505 aa4.69□□□□□ -1.66
PHTF2-202ENST00000275575 GIGYF2Q6Y7W6 1299 aaKnown RBP4.69□□□□□ -1.66
PHTF2-202ENST00000275575 CRAMP1Q96RY5 1269 aa4.69□□□□□ -1.66
PHTF2-202ENST00000275575 TAF1DQ9H5J8 278 aaPredicted RBP4.69□□□□□ -1.66
PHTF2-202ENST00000275575 TESPA1A2RU30 521 aaPredicted RBP4.69□□□□□ -1.66
PHTF2-202ENST00000275575 TRAPPC3LQ5T215 181 aa4.69□□□□□ -1.66
PHTF2-202ENST00000275575 C9orf131Q5VYM1 1079 aa4.69□□□□□ -1.66
PHTF2-202ENST00000275575 ZNF530Q6P9A1 599 aaPredicted RBP4.69□□□□□ -1.66
PHTF2-202ENST00000275575 MCM10Q7L590 875 aa4.69□□□□□ -1.66
PHTF2-202ENST00000275575 CDHR2Q9BYE9 1310 aa4.69□□□□□ -1.66
PHTF2-202ENST00000275575 CFAP47Q6ZTR5 3102 aa4.68□□□□□ -1.66
PHTF2-202ENST00000275575 HOXB7P09629 217 aa4.68□□□□□ -1.66
PHTF2-202ENST00000275575 RFX5P48382 616 aaPredicted RBP4.68□□□□□ -1.66
PHTF2-202ENST00000275575 MAP3K11Q16584 847 aa4.68□□□□□ -1.66
PHTF2-202ENST00000275575 CDCA8Q53HL2 280 aa4.68□□□□□ -1.66
PHTF2-202ENST00000275575 NOM1Q5C9Z4 860 aaKnown RBP4.68□□□□□ -1.66
PHTF2-202ENST00000275575 NLRP10Q86W26 655 aa4.68□□□□□ -1.66
PHTF2-202ENST00000275575 CREBZFQ9NS37 354 aa4.68□□□□□ -1.66
PHTF2-202ENST00000275575 POLLQ9UGP5 575 aa4.68□□□□□ -1.66
PHTF2-202ENST00000275575 KMT2EQ8IZD2 1858 aa4.68□□□□□ -1.66
PHTF2-202ENST00000275575 HSP90AB1P08238 724 aaKnown RBP4.68□□□□□ -1.66
PHTF2-202ENST00000275575 FKBP4Q02790 459 aaKnown RBP eCLIP4.68□□□□□ -1.66
PHTF2-202ENST00000275575 PRPF40BQ6NWY9 871 aaKnown RBP4.68□□□□□ -1.66
PHTF2-202ENST00000275575 HSPA8P11142 646 aaKnown RBP4.68□□□□□ -1.66
PHTF2-202ENST00000275575 NFE2L2Q16236 605 aa4.68□□□□□ -1.66
PHTF2-202ENST00000275575 TEPSINQ96N21 525 aa4.68□□□□□ -1.66
PHTF2-202ENST00000275575 SF3B2Q13435 895 aaKnown RBP4.67□□□□□ -1.66
PHTF2-202ENST00000275575 PLEKHO1Q53GL0 409 aaPredicted RBP4.67□□□□□ -1.66
PHTF2-202ENST00000275575 POTEDQ86YR6 584 aa4.67□□□□□ -1.66
PHTF2-202ENST00000275575 HMOX1P09601 288 aa4.67□□□□□ -1.66
PHTF2-202ENST00000275575 TMPOP42166 694 aaKnown RBP4.67□□□□□ -1.66
PHTF2-202ENST00000275575 ERFEQ4G0M1 354 aa4.67□□□□□ -1.66
PHTF2-202ENST00000275575 LTV1Q96GA3 475 aaPredicted RBP4.67□□□□□ -1.66
PHTF2-202ENST00000275575 PRKRIP1Q9H875 184 aaPredicted RBP4.67□□□□□ -1.66
PHTF2-202ENST00000275575 ASTN2O75129 1339 aaPredicted RBP4.67□□□□□ -1.66
PHTF2-202ENST00000275575 MNX1P50219 401 aaPredicted RBP4.67□□□□□ -1.66
PHTF2-202ENST00000275575 APLP1P51693 650 aa4.67□□□□□ -1.66
PHTF2-202ENST00000275575 DLK2Q6UY11 383 aa4.67□□□□□ -1.66
PHTF2-202ENST00000275575 CCDC9Q9Y3X0 531 aaKnown RBP4.67□□□□□ -1.66
PHTF2-202ENST00000275575 LOXHD1Q8IVV2 1947 aa4.67□□□□□ -1.66
PHTF2-202ENST00000275575 DIAPH1O60610 1272 aaKnown RBP4.67□□□□□ -1.66
PHTF2-202ENST00000275575 LMNB1P20700 586 aa4.67□□□□□ -1.66
PHTF2-202ENST00000275575 CTGFP29279 349 aa4.67□□□□□ -1.66
PHTF2-202ENST00000275575 PRKAR2BP31323 418 aa4.67□□□□□ -1.66
PHTF2-202ENST00000275575 TSPYL6Q8N831 410 aa4.67□□□□□ -1.66
PHTF2-202ENST00000275575 RAPGEF4Q8WZA2 1011 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms