RNA–Protein interactions for RNA: ENST00000272602.6

CNGA3-201, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA3, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-201ENST00000272602 CTNNA3Q9UI47 895 aa12.8□□□□□ -0.36
CNGA3-201ENST00000272602 IQGAP1P46940 1657 aa12.8□□□□□ -0.36
CNGA3-201ENST00000272602 MYOM1P52179 1685 aa12.8□□□□□ -0.36
CNGA3-201ENST00000272602 BECN2A8MW95 431 aa12.79□□□□□ -0.36
CNGA3-201ENST00000272602 GJB2P29033 226 aa12.79□□□□□ -0.36
CNGA3-201ENST00000272602 NECAB1Q8N987 351 aa12.79□□□□□ -0.36
CNGA3-201ENST00000272602 FAM200AQ8TCP9 573 aa12.79□□□□□ -0.36
CNGA3-201ENST00000272602 QTRT2Q9H974 415 aaKnown RBP12.79□□□□□ -0.36
CNGA3-201ENST00000272602 ST7Q9NRC1 585 aa12.79□□□□□ -0.36
CNGA3-201ENST00000272602 CHPF2Q9P2E5 772 aa12.79□□□□□ -0.36
CNGA3-201ENST00000272602 SPATA31A3Q5VYP0 1347 aa12.79□□□□□ -0.36
CNGA3-201ENST00000272602 FOSBP53539 338 aa12.79□□□□□ -0.36
CNGA3-201ENST00000272602 GABPB1Q06547 395 aaPredicted RBP12.79□□□□□ -0.36
CNGA3-201ENST00000272602 IFNL2Q8IZJ0 200 aa12.79□□□□□ -0.36
CNGA3-201ENST00000272602 GTF3C6Q969F1 213 aa12.79□□□□□ -0.36
CNGA3-201ENST00000272602 POLR3GO15318 223 aaPredicted RBP12.79□□□□□ -0.36
CNGA3-201ENST00000272602 AK2P54819 239 aa12.79□□□□□ -0.36
CNGA3-201ENST00000272602 PTPN14Q15678 1187 aa12.79□□□□□ -0.36
CNGA3-201ENST00000272602 SPATA31D1Q6ZQQ2 1576 aa12.79□□□□□ -0.36
CNGA3-201ENST00000272602 CERS3Q8IU89 383 aa12.79□□□□□ -0.36
CNGA3-201ENST00000272602 ZNF215Q9UL58 517 aaPredicted RBP12.79□□□□□ -0.36
CNGA3-201ENST00000272602 TYRO3Q06418 890 aa12.78□□□□□ -0.36
CNGA3-201ENST00000272602 ELF2Q15723 593 aa12.78□□□□□ -0.36
CNGA3-201ENST00000272602 LARP1BQ659C4 914 aaKnown RBP12.78□□□□□ -0.36
CNGA3-201ENST00000272602 UNC5CLQ8IV45 518 aa12.78□□□□□ -0.36
CNGA3-201ENST00000272602 TRIM34Q9BYJ4 488 aa12.78□□□□□ -0.36
CNGA3-201ENST00000272602 ASAP1Q9ULH1 1129 aa12.78□□□□□ -0.36
CNGA3-201ENST00000272602 NCBP3Q53F19 620 aaKnown RBP12.78□□□□□ -0.36
CNGA3-201ENST00000272602 DACT1Q9NYF0 836 aa12.78□□□□□ -0.36
CNGA3-201ENST00000272602 GNAI2P04899 355 aa12.78□□□□□ -0.36
CNGA3-201ENST00000272602 IRX5P78411 483 aaPredicted RBP12.78□□□□□ -0.36
CNGA3-201ENST00000272602 DNAJC25Q9H1X3 360 aa12.78□□□□□ -0.36
CNGA3-201ENST00000272602 LIMCH1Q9UPQ0 1083 aa12.78□□□□□ -0.36
CNGA3-201ENST00000272602 C1orf167Q5SNV9 1468 aa12.78□□□□□ -0.36
CNGA3-201ENST00000272602 DEPDC5O75140 1603 aa12.77□□□□□ -0.36
CNGA3-201ENST00000272602 ZNF165P49910 485 aa12.77□□□□□ -0.36
CNGA3-201ENST00000272602 KRT85P78386 507 aa12.77□□□□□ -0.36
CNGA3-201ENST00000272602 ZFP91Q96JP5 570 aaPredicted RBP12.77□□□□□ -0.36
CNGA3-201ENST00000272602 NSD2O96028 1365 aa12.77□□□□□ -0.37
CNGA3-201ENST00000272602 SIRT1Q96EB6 747 aa12.77□□□□□ -0.37
CNGA3-201ENST00000272602 TCEANC2Q96MN5 208 aa12.77□□□□□ -0.37
CNGA3-201ENST00000272602 JAKMIP1Q96N16 626 aaKnown RBP12.77□□□□□ -0.37
CNGA3-201ENST00000272602 USP16Q9Y5T5 823 aa12.77□□□□□ -0.37
CNGA3-201ENST00000272602 TCHHQ07283 1943 aa12.77□□□□□ -0.37
CNGA3-201ENST00000272602 ADGRB1O14514 1584 aa12.77□□□□□ -0.37
CNGA3-201ENST00000272602 PI4KAP2A4QPH2 592 aa12.76□□□□□ -0.37
CNGA3-201ENST00000272602 SURF6O75683 361 aaKnown RBP12.76□□□□□ -0.37
CNGA3-201ENST00000272602 STK3Q13188 491 aa12.76□□□□□ -0.37
CNGA3-201ENST00000272602 TERF2Q15554 542 aa12.76□□□□□ -0.37
CNGA3-201ENST00000272602 TAF7LQ5H9L4 462 aa12.76□□□□□ -0.37
CNGA3-201ENST00000272602 PI4KAP1Q8N8J0 262 aa12.76□□□□□ -0.37
CNGA3-201ENST00000272602 DDX41Q9UJV9 622 aaKnown RBP12.76□□□□□ -0.37
CNGA3-201ENST00000272602 ZNF496Q96IT1 587 aaPredicted RBP12.76□□□□□ -0.37
CNGA3-201ENST00000272602 CALCOCO1Q9P1Z2 691 aa12.76□□□□□ -0.37
CNGA3-201ENST00000272602 PAXBP1Q9Y5B6 917 aa12.76□□□□□ -0.37
CNGA3-201ENST00000272602 LIG1P18858 919 aa12.76□□□□□ -0.37
CNGA3-201ENST00000272602 KIF18AQ8NI77 898 aa12.76□□□□□ -0.37
CNGA3-201ENST00000272602 SLFN14P0C7P3 912 aa12.75□□□□□ -0.37
CNGA3-201ENST00000272602 ANAPC15P60006 121 aa12.75□□□□□ -0.37
CNGA3-201ENST00000272602 CWF19L2Q2TBE0 894 aaKnown RBP12.75□□□□□ -0.37
CNGA3-201ENST00000272602 ZSCAN25Q6NSZ9 544 aa12.75□□□□□ -0.37
CNGA3-201ENST00000272602 CBX8Q9HC52 389 aa12.75□□□□□ -0.37
CNGA3-201ENST00000272602 HTATSF1O43719 755 aaKnown RBP12.75□□□□□ -0.37
CNGA3-201ENST00000272602 TRIM37O94972 964 aa12.75□□□□□ -0.37
CNGA3-201ENST00000272602 PDIA4P13667 645 aaKnown RBP12.75□□□□□ -0.37
CNGA3-201ENST00000272602 ARID5BQ14865 1188 aa12.75□□□□□ -0.37
CNGA3-201ENST00000272602 HOMER1Q86YM7 354 aa12.75□□□□□ -0.37
CNGA3-201ENST00000272602 ZNF397Q8NF99 534 aaPredicted RBP12.75□□□□□ -0.37
CNGA3-201ENST00000272602 NOL10Q9BSC4 688 aaKnown RBP12.75□□□□□ -0.37
CNGA3-201ENST00000272602 SHPRHQ149N8 1683 aa12.75□□□□□ -0.37
CNGA3-201ENST00000272602 CTIFO43310 598 aaKnown RBP12.75□□□□□ -0.37
CNGA3-201ENST00000272602 CACTINQ8WUQ7 758 aaKnown RBP12.75□□□□□ -0.37
CNGA3-201ENST00000272602 SPATA32Q96LK8 384 aa12.75□□□□□ -0.37
CNGA3-201ENST00000272602 BRPF1P55201 1214 aaPredicted RBP12.74□□□□□ -0.37
CNGA3-201ENST00000272602 ZRSR1Q15695 479 aaKnown RBP12.74□□□□□ -0.37
CNGA3-201ENST00000272602 PRPF40BQ6NWY9 871 aaKnown RBP12.74□□□□□ -0.37
CNGA3-201ENST00000272602 RTL1A6NKG5 1358 aa12.74□□□□□ -0.37
CNGA3-201ENST00000272602 QRICH2Q9H0J4 1663 aa12.74□□□□□ -0.37
CNGA3-201ENST00000272602 SKILP12757 684 aa12.74□□□□□ -0.37
CNGA3-201ENST00000272602 ATP6V1AP38606 617 aa12.74□□□□□ -0.37
CNGA3-201ENST00000272602 COPS6Q7L5N1 327 aa12.74□□□□□ -0.37
CNGA3-201ENST00000272602 FMNL2Q96PY5 1086 aa12.74□□□□□ -0.37
CNGA3-201ENST00000272602 MYD88Q99836 296 aa12.74□□□□□ -0.37
CNGA3-201ENST00000272602 PDRG1Q9NUG6 133 aa12.74□□□□□ -0.37
CNGA3-201ENST00000272602 ERBB3P21860 1342 aa12.74□□□□□ -0.37
CNGA3-201ENST00000272602 PROSER3Q2NL68 480 aa12.74□□□□□ -0.37
CNGA3-201ENST00000272602 CYP27B1O15528 508 aa12.73□□□□□ -0.37
CNGA3-201ENST00000272602 RNMTO43148 476 aaKnown RBP12.73□□□□□ -0.37
CNGA3-201ENST00000272602 KMT5BQ4FZB7 885 aa12.73□□□□□ -0.37
CNGA3-201ENST00000272602 PTF1AQ7RTS3 328 aa12.73□□□□□ -0.37
CNGA3-201ENST00000272602 RASEFQ8IZ41 740 aa12.73□□□□□ -0.37
CNGA3-201ENST00000272602 FAM135BQ49AJ0 1406 aa12.73□□□□□ -0.37
CNGA3-201ENST00000272602 PNMA6EA0A0J9YXQ4 647 aa12.73□□□□□ -0.37
CNGA3-201ENST00000272602 LARGE1O95461 756 aa12.73□□□□□ -0.37
CNGA3-201ENST00000272602 CCDC30Q5VVM6 783 aa12.73□□□□□ -0.37
CNGA3-201ENST00000272602 DNAJC10Q8IXB1 793 aa12.73□□□□□ -0.37
CNGA3-201ENST00000272602 IPO4Q8TEX9 1081 aaKnown RBP12.73□□□□□ -0.37
CNGA3-201ENST00000272602 IL25Q9H293 177 aa12.73□□□□□ -0.37
CNGA3-201ENST00000272602 UTRNP46939 3433 aa12.73□□□□□ -0.37
CNGA3-201ENST00000272602 SBNO1A3KN83 1393 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms