RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 ZBTB17Q13105 803 aa5.65□□□□□ -1.5
HMCN1-201ENST00000271588 RABGAP1Q9Y3P9 1069 aa5.65□□□□□ -1.5
HMCN1-201ENST00000271588 PPFIA1Q13136 1202 aa5.65□□□□□ -1.5
HMCN1-201ENST00000271588 ERCC6LQ2NKX8 1250 aa5.65□□□□□ -1.5
HMCN1-201ENST00000271588 VWA3BQ502W6 1294 aa5.65□□□□□ -1.5
HMCN1-201ENST00000271588 BICDL2A1A5D9 508 aa5.65□□□□□ -1.5
HMCN1-201ENST00000271588 CTAGE9A4FU28 777 aa5.65□□□□□ -1.5
HMCN1-201ENST00000271588 ZNF165P49910 485 aa5.65□□□□□ -1.5
HMCN1-201ENST00000271588 SPG7Q9UQ90 795 aa5.65□□□□□ -1.5
HMCN1-201ENST00000271588 CCDC102BQ68D86 513 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 GBP6Q6ZN66 633 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 ZBTB12Q9Y330 459 aaPredicted RBP5.65□□□□□ -1.51
HMCN1-201ENST00000271588 LRRFIP2Q9Y608 721 aaKnown RBP5.65□□□□□ -1.51
HMCN1-201ENST00000271588 TTC31Q49AM3 519 aaPredicted RBP5.65□□□□□ -1.51
HMCN1-201ENST00000271588 LMNTD2Q8IXW0 634 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 SMC6Q96SB8 1091 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 VCX3BQ9H321 246 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 CCDC174Q6PII3 467 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 FCHSD1Q86WN1 690 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 BCL2L13Q9BXK5 485 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 VCXQ9H320 206 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 LARP1Q6PKG0 1096 aaKnown RBP5.65□□□□□ -1.51
HMCN1-201ENST00000271588 RUFY4Q6ZNE9 571 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 PPFIBP2Q8ND30 876 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 POLR3AO14802 1390 aaPredicted RBP5.65□□□□□ -1.51
HMCN1-201ENST00000271588 PSMD1Q99460 953 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 TEX13AQ9BXU3 409 aaPredicted RBP5.65□□□□□ -1.51
HMCN1-201ENST00000271588 STX6O43752 255 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 HDGFL1Q5TGJ6 251 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 CACNA2D3Q8IZS8 1091 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 CNNM2Q9H8M5 875 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 FAM184BQ9ULE4 1060 aa5.65□□□□□ -1.51
HMCN1-201ENST00000271588 NOL3O60936 208 aaKnown RBP5.64□□□□□ -1.51
HMCN1-201ENST00000271588 MSL1Q68DK7 614 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 C8orf76Q96K31 380 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 MED4Q9NPJ6 270 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 TTF2Q9UNY4 1162 aaKnown RBP5.64□□□□□ -1.51
HMCN1-201ENST00000271588 SOX12O15370 315 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 LACTBP83111 547 aaPredicted RBP5.64□□□□□ -1.51
HMCN1-201ENST00000271588 CCDC51Q96ER9 411 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 PPFIA4O75335 1185 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 CCDC6Q16204 474 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 MINK1Q8N4C8 1332 aaPredicted RBP5.64□□□□□ -1.51
HMCN1-201ENST00000271588 FERP16591 822 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 CCDC121Q6ZUS5 278 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 ATP2A2P16615 1042 aaKnown RBP5.64□□□□□ -1.51
HMCN1-201ENST00000271588 MTMR3Q13615 1198 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 CCDC129Q6ZRS4 1044 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 LARSQ9P2J5 1176 aaKnown RBP5.64□□□□□ -1.51
HMCN1-201ENST00000271588 KCNG1Q9UIX4 513 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 PRKAR2BP31323 418 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 TSNAXIP1Q2TAA8 658 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 TRIM7Q9C029 511 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 MTRF1LQ9UGC7 380 aaKnown RBP5.64□□□□□ -1.51
HMCN1-201ENST00000271588 TRIM37O94972 964 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 ACTN2P35609 894 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 CEP126Q9P2H0 1117 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 ZNF445P59923 1031 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 TNNC1P63316 161 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 PHLDB2Q86SQ0 1253 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 THEGQ9P2T0 379 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 BAG4O95429 457 aaKnown RBP5.64□□□□□ -1.51
HMCN1-201ENST00000271588 CFAP157Q5JU67 520 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 TNPO1Q92973 898 aaKnown RBP5.64□□□□□ -1.51
HMCN1-201ENST00000271588 LLPHQ9BRT6 129 aaKnown RBP5.64□□□□□ -1.51
HMCN1-201ENST00000271588 SYCE3A1L190 88 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 SLC8A1P32418 973 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 ZNF330Q9Y3S2 320 aaPredicted RBP5.64□□□□□ -1.51
HMCN1-201ENST00000271588 RTEL1-TNFRSF6BF6WH68 1400 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 PIK3R4Q99570 1358 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 VIMP08670 466 aaKnown RBP5.64□□□□□ -1.51
HMCN1-201ENST00000271588 EXOSC9Q06265 439 aaKnown RBP5.64□□□□□ -1.51
HMCN1-201ENST00000271588 FBF1Q8TES7 1133 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 HYPKQ9NX55 129 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 FEZ2Q9UHY8 353 aaPredicted RBP5.64□□□□□ -1.51
HMCN1-201ENST00000271588 REREQ9P2R6 1566 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 CALM1P0DP23 149 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 CALM2P0DP24 149 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 CALM3P0DP25 149 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 NOLC1Q14978 699 aaKnown RBP eCLIP5.64□□□□□ -1.51
HMCN1-201ENST00000271588 NOB1Q9ULX3 412 aaKnown RBP5.64□□□□□ -1.51
HMCN1-201ENST00000271588 IKBKGQ9Y6K9 419 aa5.64□□□□□ -1.51
HMCN1-201ENST00000271588 TATP17735 454 aaPredicted RBP5.63□□□□□ -1.51
HMCN1-201ENST00000271588 TSNARE1Q96NA8 513 aa5.63□□□□□ -1.51
HMCN1-201ENST00000271588 TCP11L1Q9NUJ3 509 aa5.63□□□□□ -1.51
HMCN1-201ENST00000271588 RAB3GAP1Q15042 981 aa5.63□□□□□ -1.51
HMCN1-201ENST00000271588 SETDB1Q15047 1291 aa5.63□□□□□ -1.51
HMCN1-201ENST00000271588 FOXD4L5Q5VV16 416 aaPredicted RBP5.63□□□□□ -1.51
HMCN1-201ENST00000271588 MSANTD4Q8NCY6 345 aa5.63□□□□□ -1.51
HMCN1-201ENST00000271588 FOXD4L4Q8WXT5 416 aaPredicted RBP5.63□□□□□ -1.51
HMCN1-201ENST00000271588 PLCB1Q9NQ66 1216 aa5.63□□□□□ -1.51
HMCN1-201ENST00000271588 EVI5O60447 810 aa5.63□□□□□ -1.51
HMCN1-201ENST00000271588 BANK1Q8NDB2 785 aa5.63□□□□□ -1.51
HMCN1-201ENST00000271588 ANKRD62A6NC57 917 aa5.63□□□□□ -1.51
HMCN1-201ENST00000271588 BRD3Q15059 726 aa5.63□□□□□ -1.51
HMCN1-201ENST00000271588 CCDC40Q4G0X9 1142 aa5.63□□□□□ -1.51
HMCN1-201ENST00000271588 CCDC14Q49A88 953 aa5.63□□□□□ -1.51
HMCN1-201ENST00000271588 RNF168Q8IYW5 571 aaPredicted RBP5.63□□□□□ -1.51
HMCN1-201ENST00000271588 UTP14AQ9BVJ6 771 aaKnown RBP5.63□□□□□ -1.51
HMCN1-201ENST00000271588 CENPHQ9H3R5 247 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms