RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 GIGYF2Q6Y7W6 1299 aaKnown RBP18.69■□□□□ 0.58
COMMD4-201ENST00000267935 AIDAQ96BJ3 306 aa18.69■□□□□ 0.58
COMMD4-201ENST00000267935 TSPYL4Q9UJ04 414 aa18.69■□□□□ 0.58
COMMD4-201ENST00000267935 SCN4AP35499 1836 aa18.69■□□□□ 0.58
COMMD4-201ENST00000267935 PASKQ96RG2 1323 aa18.69■□□□□ 0.58
COMMD4-201ENST00000267935 ZNF541Q9H0D2 1346 aa18.69■□□□□ 0.58
COMMD4-201ENST00000267935 CACNA1SQ13698 1873 aa18.69■□□□□ 0.58
COMMD4-201ENST00000267935 ARFGEF2Q9Y6D5 1785 aa18.68■□□□□ 0.58
COMMD4-201ENST00000267935 ITGBL1O95965 494 aaPredicted RBP18.68■□□□□ 0.58
COMMD4-201ENST00000267935 SUSD4Q5VX71 490 aa18.68■□□□□ 0.58
COMMD4-201ENST00000267935 ZNF34Q8IZ26 560 aa18.68■□□□□ 0.58
COMMD4-201ENST00000267935 CNTROBQ8N137 903 aa18.68■□□□□ 0.58
COMMD4-201ENST00000267935 BABAM1Q9NWV8 329 aa18.68■□□□□ 0.58
COMMD4-201ENST00000267935 LMOD3Q0VAK6 560 aa18.67■□□□□ 0.58
COMMD4-201ENST00000267935 LARGE2Q8N3Y3 721 aa18.67■□□□□ 0.58
COMMD4-201ENST00000267935 THUMPD2Q9BTF0 503 aaKnown RBP18.67■□□□□ 0.58
COMMD4-201ENST00000267935 GJA3Q9Y6H8 435 aa18.67■□□□□ 0.58
COMMD4-201ENST00000267935 CNTNAP1P78357 1384 aa18.67■□□□□ 0.58
COMMD4-201ENST00000267935 IBTKQ9P2D0 1353 aaPredicted RBP18.67■□□□□ 0.58
COMMD4-201ENST00000267935 EIF2S2P20042 333 aaKnown RBP18.66■□□□□ 0.58
COMMD4-201ENST00000267935 RIPK4P57078 832 aa18.66■□□□□ 0.58
COMMD4-201ENST00000267935 UTP14AQ9BVJ6 771 aaKnown RBP18.66■□□□□ 0.58
COMMD4-201ENST00000267935 VPS33BQ9H267 617 aa18.66■□□□□ 0.58
COMMD4-201ENST00000267935 RNF123Q5XPI4 1314 aa18.66■□□□□ 0.58
COMMD4-201ENST00000267935 PPEF1O14829 653 aaPredicted RBP18.65■□□□□ 0.58
COMMD4-201ENST00000267935 DEFB115Q30KQ5 88 aa18.65■□□□□ 0.58
COMMD4-201ENST00000267935 HSP90AB3PQ58FF7 597 aa18.65■□□□□ 0.58
COMMD4-201ENST00000267935 NIM1KQ8IY84 436 aa18.65■□□□□ 0.58
COMMD4-201ENST00000267935 SUPT20HQ8NEM7 779 aa18.65■□□□□ 0.58
COMMD4-201ENST00000267935 TCERG1O14776 1098 aaKnown RBP18.64■□□□□ 0.57
COMMD4-201ENST00000267935 CTCFP49711 727 aaPredicted RBP18.64■□□□□ 0.57
COMMD4-201ENST00000267935 RALBP1Q15311 655 aa18.64■□□□□ 0.57
COMMD4-201ENST00000267935 SLC10A5Q5PT55 438 aa18.64■□□□□ 0.57
COMMD4-201ENST00000267935 BBOX1O75936 387 aa18.63■□□□□ 0.57
COMMD4-201ENST00000267935 NTSR2O95665 410 aa18.63■□□□□ 0.57
COMMD4-201ENST00000267935 VEGFBP49765 207 aa18.63■□□□□ 0.57
COMMD4-201ENST00000267935 MAP1SQ66K74 1059 aaPredicted RBP18.63■□□□□ 0.57
COMMD4-201ENST00000267935 PRDM10Q9NQV6 1147 aa18.63■□□□□ 0.57
COMMD4-201ENST00000267935 UBN2Q6ZU65 1347 aa18.63■□□□□ 0.57
COMMD4-201ENST00000267935 ABCC12Q96J65 1359 aa18.63■□□□□ 0.57
COMMD4-201ENST00000267935 ABT1Q9ULW3 272 aaKnown RBP18.62■□□□□ 0.57
COMMD4-201ENST00000267935 RIC1Q4ADV7 1423 aa18.62■□□□□ 0.57
COMMD4-201ENST00000267935 NUP98P52948 1817 aa18.61■□□□□ 0.57
COMMD4-201ENST00000267935 PPIP5K2O43314 1243 aa18.61■□□□□ 0.57
COMMD4-201ENST00000267935 USP50Q70EL3 339 aaPredicted RBP18.61■□□□□ 0.57
COMMD4-201ENST00000267935 ATP6V0A2Q9Y487 856 aa18.61■□□□□ 0.57
COMMD4-201ENST00000267935 FOXN1O15353 648 aa18.6■□□□□ 0.57
COMMD4-201ENST00000267935 MAP2K1Q02750 393 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-201ENST00000267935 PCNTO95613 3336 aa18.6■□□□□ 0.57
COMMD4-201ENST00000267935 LAMB4A4D0S4 1761 aa18.6■□□□□ 0.57
COMMD4-201ENST00000267935 DLG5Q8TDM6 1919 aa18.59■□□□□ 0.57
COMMD4-201ENST00000267935 RASSF10A6NK89 507 aa18.59■□□□□ 0.57
COMMD4-201ENST00000267935 TMPOP42166 694 aaKnown RBP18.59■□□□□ 0.57
COMMD4-201ENST00000267935 PDIA6Q15084 440 aa18.59■□□□□ 0.57
COMMD4-201ENST00000267935 COPS6Q7L5N1 327 aa18.59■□□□□ 0.57
COMMD4-201ENST00000267935 DDX21Q9NR30 783 aaKnown RBP eCLIP18.59■□□□□ 0.57
COMMD4-201ENST00000267935 ECE1P42892 770 aa18.58■□□□□ 0.56
COMMD4-201ENST00000267935 AIMP1Q12904 312 aaKnown RBP18.58■□□□□ 0.56
COMMD4-201ENST00000267935 DPP8Q6V1X1 898 aaPredicted RBP18.58■□□□□ 0.56
COMMD4-201ENST00000267935 DDX46Q7L014 1031 aaKnown RBP18.58■□□□□ 0.56
COMMD4-201ENST00000267935 SP8Q8IXZ3 490 aa18.58■□□□□ 0.56
COMMD4-201ENST00000267935 WBP1LQ9NX94 342 aa18.58■□□□□ 0.56
COMMD4-201ENST00000267935 ZNRF3Q9ULT6 936 aa18.58■□□□□ 0.56
COMMD4-201ENST00000267935 KDM3BQ7LBC6 1761 aa18.58■□□□□ 0.56
COMMD4-201ENST00000267935 EPS15P42566 896 aa18.57■□□□□ 0.56
COMMD4-201ENST00000267935 TCIRG1Q13488 830 aa18.57■□□□□ 0.56
COMMD4-201ENST00000267935 MPNDQ8N594 471 aa18.57■□□□□ 0.56
COMMD4-201ENST00000267935 BEGAINQ9BUH8 593 aa18.57■□□□□ 0.56
COMMD4-201ENST00000267935 TRMT112Q9UI30 125 aaKnown RBP18.57■□□□□ 0.56
COMMD4-201ENST00000267935 WDR33Q9C0J8 1336 aaKnown RBP18.56■□□□□ 0.56
COMMD4-201ENST00000267935 SCNN1DP51172 638 aa18.56■□□□□ 0.56
COMMD4-201ENST00000267935 TNIP1Q15025 636 aa18.56■□□□□ 0.56
COMMD4-201ENST00000267935 AOC3Q16853 763 aa18.56■□□□□ 0.56
COMMD4-201ENST00000267935 TMC4Q7Z404 712 aa18.56■□□□□ 0.56
COMMD4-201ENST00000267935 XAGE3Q8WTP9 111 aa18.56■□□□□ 0.56
COMMD4-201ENST00000267935 NECTIN2Q92692 538 aa18.56■□□□□ 0.56
COMMD4-201ENST00000267935 RTFDC1Q9BY42 306 aaPredicted RBP18.56■□□□□ 0.56
COMMD4-201ENST00000267935 ADARB2Q9NS39 739 aaKnown RBP18.56■□□□□ 0.56
COMMD4-201ENST00000267935 SH3TC1Q8TE82 1336 aa18.55■□□□□ 0.56
COMMD4-201ENST00000267935 ANXA1P04083 346 aa18.55■□□□□ 0.56
COMMD4-201ENST00000267935 NEUROD2Q15784 382 aa18.55■□□□□ 0.56
COMMD4-201ENST00000267935 C3orf67Q6ZVT6 689 aa18.55■□□□□ 0.56
COMMD4-201ENST00000267935 PAXIP1Q6ZW49 1069 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-201ENST00000267935 LRP10Q7Z4F1 713 aa18.55■□□□□ 0.56
COMMD4-201ENST00000267935 NLRP10Q86W26 655 aa18.55■□□□□ 0.56
COMMD4-201ENST00000267935 LAS1LQ9Y4W2 734 aaKnown RBP18.55■□□□□ 0.56
COMMD4-201ENST00000267935 SNED1Q8TER0 1413 aa18.55■□□□□ 0.56
COMMD4-201ENST00000267935 HCLS1P14317 486 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-201ENST00000267935 WDR43Q15061 677 aaKnown RBP eCLIP18.54■□□□□ 0.56
COMMD4-201ENST00000267935 PROSER3Q2NL68 480 aa18.54■□□□□ 0.56
COMMD4-201ENST00000267935 BCL2L13Q9BXK5 485 aa18.54■□□□□ 0.56
COMMD4-201ENST00000267935 GPRC5DQ9NZD1 345 aa18.54■□□□□ 0.56
COMMD4-201ENST00000267935 ABCC4O15439 1325 aa18.53■□□□□ 0.56
COMMD4-201ENST00000267935 CHL1O00533 1208 aa18.53■□□□□ 0.56
COMMD4-201ENST00000267935 LBX1P52954 281 aa18.53■□□□□ 0.56
COMMD4-201ENST00000267935 CXCL9Q07325 125 aa18.53■□□□□ 0.56
COMMD4-201ENST00000267935 GRAPQ13588 217 aa18.53■□□□□ 0.56
COMMD4-201ENST00000267935 CIAPIN1Q6FI81 312 aa18.53■□□□□ 0.56
COMMD4-201ENST00000267935 GRAPLQ8TC17 118 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-201ENST00000267935 RUNDC1Q96C34 613 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms