RNA–Protein interactions for RNA: ENST00000265724.7

ABCB1-201, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-201ENST00000265724 IL17REQ8NFR9 667 aa11.52□□□□□ -0.57
ABCB1-201ENST00000265724 FAM13BQ9NYF5 915 aa11.52□□□□□ -0.57
ABCB1-201ENST00000265724 R3HCC1Q9Y3T6 440 aaKnown RBP11.52□□□□□ -0.57
ABCB1-201ENST00000265724 SHROOM2Q13796 1616 aa11.52□□□□□ -0.57
ABCB1-201ENST00000265724 IFIT3O14879 490 aaKnown RBP11.52□□□□□ -0.57
ABCB1-201ENST00000265724 CCDC152Q4G0S7 254 aa11.52□□□□□ -0.57
ABCB1-201ENST00000265724 DZIP3Q86Y13 1208 aaKnown RBP11.52□□□□□ -0.57
ABCB1-201ENST00000265724 RPGRQ92834 1020 aaKnown RBP11.52□□□□□ -0.57
ABCB1-201ENST00000265724 CDK5RAP3Q96JB5 506 aa11.52□□□□□ -0.57
ABCB1-201ENST00000265724 ARAP3Q8WWN8 1544 aa11.52□□□□□ -0.57
ABCB1-201ENST00000265724 TTC41PQ6P2S7 1318 aa11.52□□□□□ -0.57
ABCB1-201ENST00000265724 PRR36Q9H6K5 1346 aa11.52□□□□□ -0.57
ABCB1-201ENST00000265724 MKNK2Q9HBH9 465 aa11.52□□□□□ -0.57
ABCB1-201ENST00000265724 POLR3DP05423 398 aaPredicted RBP11.51□□□□□ -0.57
ABCB1-201ENST00000265724 ANAPC15P60006 121 aa11.51□□□□□ -0.57
ABCB1-201ENST00000265724 MAP3K11Q16584 847 aa11.51□□□□□ -0.57
ABCB1-201ENST00000265724 NECAB1Q8N987 351 aa11.51□□□□□ -0.57
ABCB1-201ENST00000265724 TFIP11Q9UBB9 837 aaKnown RBP11.51□□□□□ -0.57
ABCB1-201ENST00000265724 NIP7Q9Y221 180 aaKnown RBP eCLIP11.51□□□□□ -0.57
ABCB1-201ENST00000265724 HSP90AA2PQ14568 343 aaPredicted RBP11.51□□□□□ -0.57
ABCB1-201ENST00000265724 NBPF5PQ86XG9 351 aaPredicted RBP11.51□□□□□ -0.57
ABCB1-201ENST00000265724 FAM135BQ49AJ0 1406 aa11.51□□□□□ -0.57
ABCB1-201ENST00000265724 NBPF7P0C2Y1 421 aaPredicted RBP11.51□□□□□ -0.57
ABCB1-201ENST00000265724 RFC4P35249 363 aa11.51□□□□□ -0.57
ABCB1-201ENST00000265724 EIF4A1P60842 406 aaKnown RBP11.51□□□□□ -0.57
ABCB1-201ENST00000265724 TRMT2AQ8IZ69 625 aaKnown RBP11.51□□□□□ -0.57
ABCB1-201ENST00000265724 BRF1Q92994 677 aa11.51□□□□□ -0.57
ABCB1-201ENST00000265724 LRRC2Q9BYS8 371 aa11.51□□□□□ -0.57
ABCB1-201ENST00000265724 SLC52A2Q9HAB3 445 aa11.51□□□□□ -0.57
ABCB1-201ENST00000265724 SLAIN2Q9P270 581 aa11.51□□□□□ -0.57
ABCB1-201ENST00000265724 IQSEC3Q9UPP2 1182 aaPredicted RBP11.51□□□□□ -0.57
ABCB1-201ENST00000265724 PNMA6EA0A0J9YXQ4 647 aa11.5□□□□□ -0.57
ABCB1-201ENST00000265724 CHMLP26374 656 aa11.5□□□□□ -0.57
ABCB1-201ENST00000265724 BRPF1P55201 1214 aaPredicted RBP11.5□□□□□ -0.57
ABCB1-201ENST00000265724 TFCP2Q12800 502 aa11.5□□□□□ -0.57
ABCB1-201ENST00000265724 NMIQ13287 307 aaPredicted RBP11.5□□□□□ -0.57
ABCB1-201ENST00000265724 IQCA1Q86XH1 822 aa11.5□□□□□ -0.57
ABCB1-201ENST00000265724 RAB11FIP4Q86YS3 637 aa11.5□□□□□ -0.57
ABCB1-201ENST00000265724 SLC12A7Q9Y666 1083 aa11.5□□□□□ -0.57
ABCB1-201ENST00000265724 ZNF521Q96K83 1311 aa11.5□□□□□ -0.57
ABCB1-201ENST00000265724 CCDC196A0A1B0GTZ2 297 aa11.5□□□□□ -0.57
ABCB1-201ENST00000265724 UQCRFS1P1P0C7P4 283 aa11.5□□□□□ -0.57
ABCB1-201ENST00000265724 SNX21Q969T3 373 aa11.5□□□□□ -0.57
ABCB1-201ENST00000265724 ZNF496Q96IT1 587 aaPredicted RBP11.5□□□□□ -0.57
ABCB1-201ENST00000265724 BCL11BQ9C0K0 894 aaPredicted RBP11.5□□□□□ -0.57
ABCB1-201ENST00000265724 HMGB2P26583 209 aaKnown RBP11.5□□□□□ -0.57
ABCB1-201ENST00000265724 SMARCC1Q92922 1105 aaPredicted RBP11.5□□□□□ -0.57
ABCB1-201ENST00000265724 RNF41Q9H4P4 317 aaPredicted RBP11.5□□□□□ -0.57
ABCB1-201ENST00000265724 ANO8Q9HCE9 1232 aaPredicted RBP11.5□□□□□ -0.57
ABCB1-201ENST00000265724 USP16Q9Y5T5 823 aa11.5□□□□□ -0.57
ABCB1-201ENST00000265724 AATKQ6ZMQ8 1374 aa11.5□□□□□ -0.57
ABCB1-201ENST00000265724 C6orf229H3BNL8 230 aa11.5□□□□□ -0.57
ABCB1-201ENST00000265724 SERPINC1P01008 464 aa11.5□□□□□ -0.57
ABCB1-201ENST00000265724 MCMDC2Q4G0Z9 681 aa11.5□□□□□ -0.57
ABCB1-201ENST00000265724 KIAA0232Q92628 1395 aa11.5□□□□□ -0.57
ABCB1-201ENST00000265724 KCNQ3O43525 872 aa11.49□□□□□ -0.57
ABCB1-201ENST00000265724 CEP57L1Q8IYX8 460 aa11.49□□□□□ -0.57
ABCB1-201ENST00000265724 KLHDC4Q8TBB5 520 aa11.49□□□□□ -0.57
ABCB1-201ENST00000265724 GOLGA8AA7E2F4 631 aa11.49□□□□□ -0.57
ABCB1-201ENST00000265724 A1BGP04217 495 aa11.49□□□□□ -0.57
ABCB1-201ENST00000265724 METTL22Q9BUU2 404 aaPredicted RBP11.49□□□□□ -0.57
ABCB1-201ENST00000265724 CLTCL1P53675 1640 aa11.49□□□□□ -0.57
ABCB1-201ENST00000265724 ZFYP08048 801 aaPredicted RBP11.49□□□□□ -0.57
ABCB1-201ENST00000265724 HELBQ8NG08 1087 aaPredicted RBP11.49□□□□□ -0.57
ABCB1-201ENST00000265724 CTCFLQ8NI51 663 aaPredicted RBP11.49□□□□□ -0.57
ABCB1-201ENST00000265724 ATP7BP35670 1465 aa11.49□□□□□ -0.57
ABCB1-201ENST00000265724 NLRP1Q9C000 1473 aa11.49□□□□□ -0.57
ABCB1-201ENST00000265724 IRS4O14654 1257 aaPredicted RBP11.48□□□□□ -0.57
ABCB1-201ENST00000265724 FILIP1LQ4L180 1135 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 MICU3Q86XE3 530 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 ANKRD18AQ8IVF6 992 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 CCDC144CPQ8IYA2 1237 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 NCOA7Q8NI08 942 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 FAM89AQ96GI7 184 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 PAG1Q9NWQ8 432 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 A0A0U1RQG5 324 aaPredicted RBP11.48□□□□□ -0.57
ABCB1-201ENST00000265724 ARHGAP31Q2M1Z3 1444 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 CCDC183Q5T5S1 534 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 ZNF287Q9HBT7 754 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 CDC42BPBQ9Y5S2 1711 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 TMEM67Q5HYA8 995 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 PLBD2Q8NHP8 589 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 SETDB2Q96T68 719 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 USP26Q9BXU7 913 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 LMTK3Q96Q04 1460 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 SLC9C2Q5TAH2 1124 aa11.48□□□□□ -0.57
ABCB1-201ENST00000265724 ORC3Q9UBD5 711 aaPredicted RBP11.48□□□□□ -0.57
ABCB1-201ENST00000265724 UTP14AQ9BVJ6 771 aaKnown RBP11.47□□□□□ -0.57
ABCB1-201ENST00000265724 ABCC4O15439 1325 aa11.47□□□□□ -0.57
ABCB1-201ENST00000265724 NLRP3Q96P20 1036 aa11.47□□□□□ -0.57
ABCB1-201ENST00000265724 ZNF219Q9P2Y4 722 aaPredicted RBP11.47□□□□□ -0.57
ABCB1-201ENST00000265724 UNC13BO14795 1591 aa11.47□□□□□ -0.57
ABCB1-201ENST00000265724 KRT18P05783 430 aaKnown RBP11.47□□□□□ -0.57
ABCB1-201ENST00000265724 TIMM10P62072 90 aa11.47□□□□□ -0.57
ABCB1-201ENST00000265724 ZNF444Q8N0Y2 327 aaPredicted RBP11.47□□□□□ -0.57
ABCB1-201ENST00000265724 GOLGA6L1Q8N7Z2 621 aa11.47□□□□□ -0.57
ABCB1-201ENST00000265724 USP6P35125 1406 aa11.47□□□□□ -0.57
ABCB1-201ENST00000265724 MCM5P33992 734 aa11.47□□□□□ -0.57
ABCB1-201ENST00000265724 MFSD6Q6ZSS7 791 aa11.47□□□□□ -0.57
ABCB1-201ENST00000265724 ESPNB1AK53 854 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms